Miyakogusa Predicted Gene

Lj0g3v0104159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0104159.1 Non Characterized Hit- tr|I1MG10|I1MG10_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10927
PE,83.85,0,seg,NULL; SEY-1,NULL; GUANYLATE BINDING PROTEIN,NULL;
RHD3,Root hair defective 3 GTP-binding,CUFF.5911.1
         (385 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g029340.1 | ROOT HAIR defective 3 GTP-binding family prote...   598   e-171
Medtr8g016310.1 | ROOT HAIR defective 3 GTP-binding family prote...   408   e-114
Medtr2g029300.1 | ROOT HAIR defective 3 GTP-binding protein | HC...   295   7e-80

>Medtr2g029340.1 | ROOT HAIR defective 3 GTP-binding family protein
           | HC | chr2:10952430-10963961 | 20130731
          Length = 833

 Score =  598 bits (1541), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 286/385 (74%), Positives = 322/385 (83%), Gaps = 1/385 (0%)

Query: 1   MLEFDKGSADAAIRQANWGASKVRDKLRRDIDSHASSVRSAKLSEIMTSFETQLVKALAE 60
           MLEF+KGSADA++RQANWG+SKVRDKLRRDIDSHA SVR+AKLSEI T+FE QL KAL  
Sbjct: 412 MLEFEKGSADASVRQANWGSSKVRDKLRRDIDSHALSVRNAKLSEITTNFEKQLAKALVA 471

Query: 61  PVESLFEAGGKDTWLSIRKLLKRETEAVVSKFLTSIAGFELDEETIERMQQTLRDHGRKV 120
           PVESLFE GGKDTWLSIRKLLK ETEA VS+F   +AGFEL+EET+E+MQQ+LRD+ RK+
Sbjct: 472 PVESLFEEGGKDTWLSIRKLLKSETEAAVSEFSAHVAGFELEEETVEKMQQSLRDYARKL 531

Query: 121 VENKAREEAGKILIRMKDRFSTVFNHDSDSLPRVWTGKEDIRAITXXXXXXXXXXXXXXX 180
           VENKAREEAGK+LIRMKDRFSTVFNHD+DSLPRVWTGKEDIRAIT               
Sbjct: 532 VENKAREEAGKVLIRMKDRFSTVFNHDNDSLPRVWTGKEDIRAITRDARSASMKLLSDMA 591

Query: 181 XIRLDEKPDRIESVLHSSLIDNKTVTASSSQYTSREASVDPLASSTWEEVSPGGVLITPV 240
            IRLDEKPD+IE VL  SL+ NKT  A+SSQYT REASVDPLASSTWEEVSPG VLI+PV
Sbjct: 592 AIRLDEKPDQIERVLDLSLV-NKTSAATSSQYTDREASVDPLASSTWEEVSPGDVLISPV 650

Query: 241 QCKSLWRQFQGETEYTVTQAISAQEAYKRSNNWLPPPWAIMAMVVLGFNEFMLLLKNPXX 300
           QCKSLWRQFQGETEYT+TQAI+AQEAYKR+NNWLPP W IMAM + GFNEFM+LLKNP  
Sbjct: 651 QCKSLWRQFQGETEYTITQAIAAQEAYKRNNNWLPPAWTIMAMAIFGFNEFMMLLKNPLL 710

Query: 301 XXXXXXXXXXXKAVWIQMDIAGEFRHGALPGLLSISSKFLPTVMNLLKRLAEEAQGNPAP 360
                      KA+W+QMD+ GEFRHGALPG+LSISSK +PT+MNLLKRLAEEAQGNPAP
Sbjct: 711 ILGIFVAYLLGKAIWVQMDVGGEFRHGALPGILSISSKVVPTIMNLLKRLAEEAQGNPAP 770

Query: 361 QGTQPQSSATQIYRNQVQKPDRVSS 385
           + T+   S +QI+RN+V KPD VSS
Sbjct: 771 ERTEQHHSDSQIFRNEVSKPDSVSS 795


>Medtr8g016310.1 | ROOT HAIR defective 3 GTP-binding family protein
           | HC | chr8:5482218-5490686 | 20130731
          Length = 819

 Score =  408 bits (1048), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/367 (53%), Positives = 258/367 (70%), Gaps = 6/367 (1%)

Query: 3   EFDKGSADAAIRQANWGASKVRDKLRRDIDSHASSVRSAKLSEIMTSFETQLVKALAEPV 62
           +FDK  AD  I   NW  SKVR+KL RDID+H +SVR AK+SE+ +S+E +L  +L+ PV
Sbjct: 421 QFDKACADVVIELTNWDTSKVREKLLRDIDAHVASVREAKISELTSSYEEKLKVSLSGPV 480

Query: 63  ESLFEAGGKDTWLSIRKLLKRETEAVVSKFLTSIAGFELDEETIERMQQTLRDHGRKVVE 122
           E+L +    DTW S+R LLKRE ++ V  F  ++ GF++DEET + M  +L D+ R VVE
Sbjct: 481 EALLDGANSDTWPSVRSLLKREIQSSVLGFSAALNGFDMDEETRQNMILSLEDYARGVVE 540

Query: 123 NKAREEAGKILIRMKDRFSTVFNHDSDSLPRVWTGKEDIRAITXXXXXXXXXXXXXXXXI 182
            KAREEAG++LIRMKDRF+ +F+HDSDS+PRVWTG EDIRAIT                +
Sbjct: 541 GKAREEAGRVLIRMKDRFTMLFSHDSDSMPRVWTGNEDIRAITKTARSASLKLLSVMAAL 600

Query: 183 RLDE-KPDRIESVLHSSLIDNKTVTASSSQYTSREASVDPLASSTWEEVSPGGVLITPVQ 241
           RLD+   D IE  L  +L+D+ +    S   T+    VDPLA+S+WE++     LITPVQ
Sbjct: 601 RLDDGDKDDIEKTLKVALLDSSSSANISRSITA----VDPLATSSWEQIPSSKTLITPVQ 656

Query: 242 CKSLWRQFQGETEYTVTQAISAQEAYKRSNNWLPPPWAIMAMVVLGFNEFMLLLKNPXXX 301
           CK+LWRQF+ ETEY+V+QAISAQEA KR NNWLPPPWAI+A+V+LGFNEFM LLKNP   
Sbjct: 657 CKTLWRQFKMETEYSVSQAISAQEANKRHNNWLPPPWAILALVILGFNEFMTLLKNPLYL 716

Query: 302 XXXXXXXXXXKAVWIQMDIAGEFRHGALPGLLSISSKFLPTVMNLLKRLAEEAQGNPAPQ 361
                     KA+W+Q++IAGEFRHG LPG++S+++KF+PT+MNL+KRLAEE   NPA  
Sbjct: 717 GVIFVGFLLIKALWVQLNIAGEFRHGVLPGVISLATKFVPTIMNLMKRLAEEGN-NPAAN 775

Query: 362 GTQPQSS 368
             Q  +S
Sbjct: 776 NPQRHTS 782


>Medtr2g029300.1 | ROOT HAIR defective 3 GTP-binding protein | HC |
           chr2:10930336-10936870 | 20130731
          Length = 697

 Score =  295 bits (754), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 156/269 (57%), Positives = 191/269 (71%), Gaps = 11/269 (4%)

Query: 1   MLEFDKGSADAAIRQANWGASKVRDKLRRDIDSHASSVRSAKLSEIMTSFETQLVKALAE 60
           M+EF+K  AD A+RQANW ASKVRDKLR DI+SHA  VR+AKL EI TSFE QL KALA 
Sbjct: 414 MVEFEKVFADVAVRQANWDASKVRDKLRCDINSHALFVRNAKLPEITTSFEKQLAKALAT 473

Query: 61  PVESLFEAGGKDTWLSIRKLLKRETEAVVSKFLTSIAGFELDEETIERMQQTLRDHGRKV 120
           PV+SLFE GG DTWLSIR LLK ETE  VS+F+  +AGF+L++ET+E+MQQ LR++ R++
Sbjct: 474 PVQSLFEKGGNDTWLSIRNLLKCETEVAVSEFVARVAGFDLEKETVEKMQQDLREYAREL 533

Query: 121 VENKAREEAGKILIRMKDRFSTVFNHDSDSLPRVWTGKEDIRAITXXXXXXXXXXXXXXX 180
           V NKAREEAGK+LIRMKDRFSTVF++D+DS  RVWT  +DI+AI                
Sbjct: 534 VVNKAREEAGKVLIRMKDRFSTVFDYDNDSQLRVWTWDKDIKAIKKDAYSASLKLLSDMV 593

Query: 181 XIRLDEKPDRIESVLHSSLIDNKTVTASSSQYTSREASVDPLASSTWEEVSPGGVLITPV 240
            IRLDEKPD+ E VL             S  YT R+  +  L S TW +VSPG +LI+P 
Sbjct: 594 AIRLDEKPDQRERVLD----------LKSFLYTDRDLYLYLLDSITW-KVSPGDILISPG 642

Query: 241 QCKSLWRQFQGETEYTVTQAISAQEAYKR 269
           QCKSLWRQ Q ET  T+ QAI+A++  K+
Sbjct: 643 QCKSLWRQLQDETVDTIRQAIAAKKEDKK 671