Miyakogusa Predicted Gene

Lj0g3v0103919.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0103919.1 Non Characterized Hit- tr|A9NSV8|A9NSV8_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,45.28,3e-17,seg,NULL,CUFF.5904.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g097890.1 | hypothetical protein | HC | chr2:41817978-4181...   184   2e-47
Medtr2g097890.3 | hypothetical protein | HC | chr2:41817978-4181...   110   5e-25
Medtr2g097890.2 | hypothetical protein | HC | chr2:41817958-4181...    78   3e-15

>Medtr2g097890.1 | hypothetical protein | HC |
           chr2:41817978-41814357 | 20130731
          Length = 154

 Score =  184 bits (468), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/101 (85%), Positives = 90/101 (89%), Gaps = 1/101 (0%)

Query: 56  NLFEVAQFLPTWGIGYHMAKTHWKEITYEITKINLYKDGKHGKAWGIAHKNGLPIAD-PK 114
           N FEVAQFLP WGIGYHMAKTHWKE++YEITK+NLYKDGKHGKAWGIAHKNGLPI D PK
Sbjct: 54  NFFEVAQFLPNWGIGYHMAKTHWKEVSYEITKLNLYKDGKHGKAWGIAHKNGLPIVDAPK 113

Query: 115 KISGVHKRCWKYLPGVAKASESSPNLTSPTDSGEKVEVQAS 155
           KISGVHKRCW+YLP V KASESSP LTS TDS  KVE QAS
Sbjct: 114 KISGVHKRCWRYLPSVVKASESSPTLTSSTDSDLKVETQAS 154


>Medtr2g097890.3 | hypothetical protein | HC |
           chr2:41817978-41814961 | 20130731
          Length = 119

 Score =  110 bits (275), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 47/54 (87%), Positives = 51/54 (94%)

Query: 56  NLFEVAQFLPTWGIGYHMAKTHWKEITYEITKINLYKDGKHGKAWGIAHKNGLP 109
           N FEVAQFLP WGIGYHMAKTHWKE++YEITK+NLYKDGKHGKAWGIAHKNG+ 
Sbjct: 54  NFFEVAQFLPNWGIGYHMAKTHWKEVSYEITKLNLYKDGKHGKAWGIAHKNGIA 107


>Medtr2g097890.2 | hypothetical protein | HC |
          chr2:41817958-41814357 | 20130731
          Length = 110

 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 32/37 (86%), Positives = 35/37 (94%)

Query: 56 NLFEVAQFLPTWGIGYHMAKTHWKEITYEITKINLYK 92
          N FEVAQFLP WGIGYHMAKTHWKE++YEITK+NLYK
Sbjct: 54 NFFEVAQFLPNWGIGYHMAKTHWKEVSYEITKLNLYK 90