Miyakogusa Predicted Gene

Lj0g3v0103089.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0103089.1 tr|F2E5W3|F2E5W3_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,34.48,4e-19,ZF_RANBP2_1,Zinc finger, RanBP2-type; Ran BP2/NZF
zinc finger-like,NULL; ZF_RANBP2_2,Zinc finger, Ra,CUFF.5827.1
         (227 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g058580.2 | zinc ion-binding protein | HC | chr3:23289865-...   208   4e-54
Medtr3g058580.1 | zinc ion-binding protein | HC | chr3:23291007-...   208   4e-54

>Medtr3g058580.2 | zinc ion-binding protein | HC |
           chr3:23289865-23288255 | 20130731
          Length = 313

 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/254 (49%), Positives = 155/254 (61%), Gaps = 42/254 (16%)

Query: 1   MAEGIPGFGNWFDLPGRRLGGYSPQHPF--------SAAEKWSQVGSLLPSGPRPKRLGG 52
           MA+GI G G  FDLPG+RLGG S Q P         +AAEK SQ+G+LLPSGP   R+GG
Sbjct: 32  MAKGITGSGEGFDLPGKRLGGNSRQPPLLSLRKTALAAAEKRSQLGTLLPSGP--NRIGG 89

Query: 53  DIVTXXXXXXXXXXXXXXXXXXXDNIWCG---CEHSDHEDEDVSYESAENIVHKRKIVGS 109
           D V                    D++WCG   C++SDHED  V+ ESAEN+V+K+ IVG+
Sbjct: 90  DSVIMKALTPVQAAAMAAERRLQDDLWCGSQSCDNSDHED--VNRESAENLVNKQIIVGT 147

Query: 110 TKLTNNSTLPWDQVSQKRSRSKDLILPIHSSSASMFIDLTEDEQEVGSI------TQHRN 163
           ++LT+NSTLP D  S+KRSR KD  LP HSSS S F+DLT D  + G +      +Q R+
Sbjct: 148 SRLTHNSTLPLDPTSRKRSRDKDSSLPAHSSSNSNFVDLTMDTPKKGCVNGHQTGSQQRS 207

Query: 164 FGLESVSDSQFNSQAGSSS-----------------HSEEPAMWECPMCTLLNMTSASIC 206
            GLE++     +SQAGS+S                 HSEE AMW+C MCTLLN + A IC
Sbjct: 208 SGLENI----LHSQAGSTSRNLPSSSGSLSGDSRPLHSEETAMWQCLMCTLLNKSLAPIC 263

Query: 207 EFCDTQQPKDVTTK 220
           E C TQQPKDVTTK
Sbjct: 264 ELCGTQQPKDVTTK 277


>Medtr3g058580.1 | zinc ion-binding protein | HC |
           chr3:23291007-23288255 | 20130731
          Length = 405

 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/254 (49%), Positives = 155/254 (61%), Gaps = 42/254 (16%)

Query: 1   MAEGIPGFGNWFDLPGRRLGGYSPQHPF--------SAAEKWSQVGSLLPSGPRPKRLGG 52
           MA+GI G G  FDLPG+RLGG S Q P         +AAEK SQ+G+LLPSGP   R+GG
Sbjct: 124 MAKGITGSGEGFDLPGKRLGGNSRQPPLLSLRKTALAAAEKRSQLGTLLPSGP--NRIGG 181

Query: 53  DIVTXXXXXXXXXXXXXXXXXXXDNIWCG---CEHSDHEDEDVSYESAENIVHKRKIVGS 109
           D V                    D++WCG   C++SDHED  V+ ESAEN+V+K+ IVG+
Sbjct: 182 DSVIMKALTPVQAAAMAAERRLQDDLWCGSQSCDNSDHED--VNRESAENLVNKQIIVGT 239

Query: 110 TKLTNNSTLPWDQVSQKRSRSKDLILPIHSSSASMFIDLTEDEQEVGSI------TQHRN 163
           ++LT+NSTLP D  S+KRSR KD  LP HSSS S F+DLT D  + G +      +Q R+
Sbjct: 240 SRLTHNSTLPLDPTSRKRSRDKDSSLPAHSSSNSNFVDLTMDTPKKGCVNGHQTGSQQRS 299

Query: 164 FGLESVSDSQFNSQAGSSS-----------------HSEEPAMWECPMCTLLNMTSASIC 206
            GLE++     +SQAGS+S                 HSEE AMW+C MCTLLN + A IC
Sbjct: 300 SGLENI----LHSQAGSTSRNLPSSSGSLSGDSRPLHSEETAMWQCLMCTLLNKSLAPIC 355

Query: 207 EFCDTQQPKDVTTK 220
           E C TQQPKDVTTK
Sbjct: 356 ELCGTQQPKDVTTK 369