Miyakogusa Predicted Gene

Lj0g3v0102809.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102809.1 Non Characterized Hit- tr|D8SWW0|D8SWW0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,36.04,0.000000001,seg,NULL; Occludin_ELL,Occludin/RNA
polymerase II elongation factor, ELL domain,CUFF.5801.1
         (344 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g015620.1 | dentin sialophosphoprotein-like protein | HC |...   434   e-122
Medtr8g015610.1 | occludin-like domain protein | LC | chr8:51382...   375   e-104

>Medtr8g015620.1 | dentin sialophosphoprotein-like protein | HC |
            chr8:5148947-5140148 | 20130731
          Length = 1220

 Score =  434 bits (1117), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 237/376 (63%), Positives = 268/376 (71%), Gaps = 36/376 (9%)

Query: 1    MDSNYPKQGEMGSKSKEGRQSTQSLLGTFPTDN-RFSLDKSPVVDGLGVSLQREPSDLEL 59
            MDSNY KQGEM  K KEG+QSTQS LGT P DN R  L+KSP V+G G+SLQRE SDLEL
Sbjct: 842  MDSNYQKQGEMVGKLKEGQQSTQSHLGTSPKDNNRTGLNKSPAVNGQGISLQRELSDLEL 901

Query: 60   GEFRESTPDETHVTKQFERKGPFKHLENKK-TSEDRNSDITKGKP-------------FV 105
            GE RESTPDET   KQFERKG FKH+ENK  TSED NS+I K KP              +
Sbjct: 902  GELRESTPDETIAAKQFERKGSFKHMENKANTSEDVNSNINKVKPSSKATLDSGRPSSVL 961

Query: 106  SSSFPSNLQSTDKKNTENHFDDSTKSRSRVMPAEF--------------------NKFRN 145
            SS FPSNL+ T+KKN + HF+DSTKSRSRVM                         KFRN
Sbjct: 962  SSGFPSNLEVTNKKNADYHFEDSTKSRSRVMQTHSQHLKADNVDVGSQNKLTEMSTKFRN 1021

Query: 146  NESGVSQDIDLDGHTESNRRAPANGSKQDTNLGINSYPVKESKRQTPNSLEAVADGGKDS 205
            +ESG++ DIDLDG +ESNRR PANGSKQ+   G+ SYPVKESKRQTPNS E V DG KDS
Sbjct: 1022 SESGMNHDIDLDGRSESNRRVPANGSKQEAKRGMVSYPVKESKRQTPNSREEVPDGRKDS 1081

Query: 206  VFAARNNIEQRKREXXXXXXXXXXXKYEKDEPELKGPIMTFSQYKEYVQEYGDKYDSYCS 265
            VFA RNN +Q+KRE           K+EK+EPELKGPI TFSQYKEYVQ+Y DKY+SY S
Sbjct: 1082 VFADRNNGDQKKRESSSDENSCSYSKFEKEEPELKGPITTFSQYKEYVQDYQDKYESYLS 1141

Query: 266  LYKILESYRNEFQQLGDDLVYAKGR-DMDRYYDILEQLKESYRRCGPRHKRLKKIFVVLH 324
            L KILE+YR EFQ+LGDDL YAK + DMDRY DI  Q+KESYRRCG +HKRLKKIF+VLH
Sbjct: 1142 LNKILENYRVEFQKLGDDLEYAKSKGDMDRYADIAAQVKESYRRCGAKHKRLKKIFIVLH 1201

Query: 325  QELENIKLRIKDFAHS 340
            +EL N K  I+DF  S
Sbjct: 1202 EELVNTKQMIRDFVQS 1217


>Medtr8g015610.1 | occludin-like domain protein | LC |
            chr8:5138213-5130677 | 20130731
          Length = 1017

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 213/392 (54%), Positives = 254/392 (64%), Gaps = 52/392 (13%)

Query: 1    MDSNYPKQGEMGSKSKEGRQSTQSLLGTFPTDN-RFSLDKSPVVDGLGVSLQREPSDLEL 59
            +DSNY K GEM  K KEGRQ TQS LG    DN R  L+KS  V+G G+SL  E SDL+ 
Sbjct: 623  VDSNYQKHGEMVGKLKEGRQGTQSHLGKSSKDNNRIGLNKSSAVNGRGISLTGELSDLDY 682

Query: 60   GEFRESTPDETHVTKQFERKGPFKHLE-NKKTSEDRNSDITKGKPFV------------- 105
            GE RESTP+ET V KQFERKG FKH+     TSE  NS+IT+ KP +             
Sbjct: 683  GELRESTPEETIVAKQFERKGSFKHIGIEANTSEVMNSNITEVKPLLKPTLDYGRPTLVL 742

Query: 106  SSSFPSNLQSTDKKNTENHFDDSTKSRSRV--------------------MPAEFNKFRN 145
            SS FPSNL +T++KN +NHF+DSTKSR RV                    +P    KFRN
Sbjct: 743  SSGFPSNLDNTNEKNVDNHFEDSTKSRCRVTQTHSHHLKADSTNVGSQFFLPEMSTKFRN 802

Query: 146  NESGVSQDIDLDGHTESNRRAPANGSKQDTNLGINSYPVKESKRQTPNSLEAVADGGKDS 205
            +ESGVS+ IDLDG  ++NRR PAN SKQDT  G+  YPVKESK QTPNS E V DG KD+
Sbjct: 803  SESGVSRGIDLDGCRDTNRRVPANRSKQDTKHGMVPYPVKESKIQTPNSCEEVPDGRKDA 862

Query: 206  VFAARNNIEQRKREXXXXXXXXXXXKYEKDEPELKGPIMTFSQYKEYVQEYGDKYDSYCS 265
            VFA RNN +Q+K+E           K+EK+EPELKGPI TFS+Y EYVQEY DKY+SY S
Sbjct: 863  VFADRNNGDQKKKELSTDENSCSYSKFEKEEPELKGPITTFSEYTEYVQEYQDKYESYIS 922

Query: 266  LYKILESYRNEFQQLGDDLVYAKGR-DMDRYYDILEQLKESYRRCGPRHKRLKKIFVVLH 324
            L+KIL+ YR EFQ+LGDDL  AK + DMDRY DI  Q++ESYR+CG R  RLKKIF+VLH
Sbjct: 923  LHKILKEYRVEFQKLGDDLESAKSKGDMDRYNDIATQIRESYRQCGSRQNRLKKIFIVLH 982

Query: 325  QE----------------LENIKLRIKDFAHS 340
            +E                ++N K RI+DF  S
Sbjct: 983  EEMVLEFLCAHHAASSHFMQNTKQRIRDFVQS 1014