Miyakogusa Predicted Gene

Lj0g3v0102549.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102549.1 tr|A9SRP5|A9SRP5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_187673,30.8,8e-19,seg,NULL,CUFF.5791.1
         (279 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g108360.1 | zinc finger protein, putative | HC | chr3:5008...   248   6e-66

>Medtr3g108360.1 | zinc finger protein, putative | HC |
           chr3:50087847-50052059 | 20130731
          Length = 2469

 Score =  248 bits (632), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 144/269 (53%), Positives = 171/269 (63%), Gaps = 20/269 (7%)

Query: 1   MGKETEILSRLAANHLHLAQFEPXXXXXXXXXXXXXXXXXXILQTIVARSGRFPNIAWST 60
           MGKETE L RL ANHLHLAQFEP                  ILQ+IVARS +FPNIAWS+
Sbjct: 1   MGKETETLCRLVANHLHLAQFEPLRGVLLALRTRNRDLTRHILQSIVARSAQFPNIAWSS 60

Query: 61  SCPSPAHLTYLSTLELLQFDGDASSAWSFDPETLRLRAEFLLLVQNLIDLVSENEGLLDK 120
           SC SPA LTYLSTLELLQ D DASS W+FD E+LRLR                  G  + 
Sbjct: 61  SCSSPALLTYLSTLELLQLD-DASSVWNFDSESLRLR------------------GGEEN 101

Query: 121 DGGEWEMCRRVLDRGMELGVKRLSVDEDGGGSERSETSVAPVEEDELMSLRKLVLNHADI 180
           D  E ++C RVLDR +ELG KRL VDE+G      E SV  +EE ELMSLRKLVL+ AD+
Sbjct: 102 DDDEVKLCTRVLDRVLELGFKRLRVDENGEIENEIEISVILIEEIELMSLRKLVLHCADV 161

Query: 181 FDALCGNIHRQIRHWECEDPGL-AXXXXXXXXXXXXXXXXMLSGIQRTVQVVHLDAMRES 239
           F+AL  NI +QIR  + ED GL                  +L GIQ+  QVVHL+A+RES
Sbjct: 162 FEALSENIEKQIRRCDLEDNGLEVNVKDGDDDLKEDVDVKVLFGIQKMAQVVHLNAIRES 221

Query: 240 IKAGEAEGAVSHIRFLHFDHGLEQSEYRF 268
           ++ G+ EGA+SHIRF+HFD+GL+QSEYR 
Sbjct: 222 LEGGDVEGAISHIRFVHFDYGLDQSEYRI 250