Miyakogusa Predicted Gene

Lj0g3v0102499.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102499.2 Non Characterized Hit- tr|I3SF42|I3SF42_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.26,0,seg,NULL;
SUBFAMILY NOT NAMED,NULL; YIP1 INTERACTING FACTOR HOMOLOG (YIF1
PROTEIN),Hrf1; YIF1,Hrf1,CUFF.5783.2
         (269 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g016655.1 | integral membrane HRF1 family protein | HC | c...   480   e-136
Medtr7g020800.1 | integral membrane HRF1 family protein | HC | c...   414   e-116
Medtr7g020800.2 | integral membrane HRF1 family protein | HC | c...   414   e-116

>Medtr6g016655.1 | integral membrane HRF1 family protein | HC |
           chr6:6365578-6362098 | 20130731
          Length = 269

 Score =  480 bits (1235), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 236/269 (87%), Positives = 244/269 (90%)

Query: 1   MYNNVGSQPGVPQPPTSSQANPFGNAFQVXXXXXXXXXXXXXXXXXXXXSSEYVQSNISR 60
           MYNNVGSQPGV QPPT++Q NPFG+AFQV                    SSEYVQSNISR
Sbjct: 1   MYNNVGSQPGVVQPPTNTQPNPFGSAFQVAGSGLIRGGLGAYGGKILGSSSEYVQSNISR 60

Query: 61  YFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120
           YFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI
Sbjct: 61  YFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAPDLYI 120

Query: 121 PLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQASLLKMTLLSLGSGEAPLL 180
           PLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQA+LLK+TLLSLGSGEAPLL
Sbjct: 121 PLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQAALLKVTLLSLGSGEAPLL 180

Query: 181 DIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMAVFLVKTMKRVLFAEVRTYDSS 240
           DIIAYAGYTFTGICLAV+GRII GYSYYFLMPWTCLCM VFLVKTMKRVLFAEVR+YDSS
Sbjct: 181 DIIAYAGYTFTGICLAVIGRIISGYSYYFLMPWTCLCMGVFLVKTMKRVLFAEVRSYDSS 240

Query: 241 KHHYLLLFIALVQFPLFTWLGNITVNWLL 269
           KHHYLLLFIALVQFPLF WLGNIT+NWLL
Sbjct: 241 KHHYLLLFIALVQFPLFIWLGNITINWLL 269


>Medtr7g020800.1 | integral membrane HRF1 family protein | HC |
           chr7:6477697-6482396 | 20130731
          Length = 273

 Score =  414 bits (1065), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/273 (78%), Positives = 227/273 (83%), Gaps = 4/273 (1%)

Query: 1   MYNNVGSQPGVPQ----PPTSSQANPFGNAFQVXXXXXXXXXXXXXXXXXXXXSSEYVQS 56
           MYNNV  Q GVPQ     PTSSQ N FGNAF                      SSEYVQS
Sbjct: 1   MYNNVRPQLGVPQFQPQLPTSSQPNVFGNAFNAAGSGLIRGGLGAYGEKIFGSSSEYVQS 60

Query: 57  NISRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 116
           NI+RYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 61  NITRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120

Query: 117 DLYIPLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQASLLKMTLLSLGSGE 176
           DLYIPLMAFGTYVVLAG+SLGL GKFSPEALN LFIKG++GW MQ +LLK+TLLSLGSGE
Sbjct: 121 DLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIKGMVGWCMQTALLKLTLLSLGSGE 180

Query: 177 APLLDIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMAVFLVKTMKRVLFAEVRT 236
           APLLDI+AYAGYTF G+ LA LG+II GYSYY LMPW CLCM +FLVKTMKRVLFAEVR+
Sbjct: 181 APLLDIVAYAGYTFAGMSLAALGKIISGYSYYVLMPWFCLCMGIFLVKTMKRVLFAEVRS 240

Query: 237 YDSSKHHYLLLFIALVQFPLFTWLGNITVNWLL 269
           YDSSKHHYLLLFIAL QFPLF WLGNITVNW +
Sbjct: 241 YDSSKHHYLLLFIALAQFPLFMWLGNITVNWFI 273


>Medtr7g020800.2 | integral membrane HRF1 family protein | HC |
           chr7:6477697-6482396 | 20130731
          Length = 273

 Score =  414 bits (1065), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/273 (78%), Positives = 227/273 (83%), Gaps = 4/273 (1%)

Query: 1   MYNNVGSQPGVPQ----PPTSSQANPFGNAFQVXXXXXXXXXXXXXXXXXXXXSSEYVQS 56
           MYNNV  Q GVPQ     PTSSQ N FGNAF                      SSEYVQS
Sbjct: 1   MYNNVRPQLGVPQFQPQLPTSSQPNVFGNAFNAAGSGLIRGGLGAYGEKIFGSSSEYVQS 60

Query: 57  NISRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 116
           NI+RYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP
Sbjct: 61  NITRYFSDPQYYFQVNDHYVKNKLKVVLFPFLHRGHWTRITEPVGGRLSYKPPIYDINAP 120

Query: 117 DLYIPLMAFGTYVVLAGLSLGLHGKFSPEALNLLFIKGLLGWFMQASLLKMTLLSLGSGE 176
           DLYIPLMAFGTYVVLAG+SLGL GKFSPEALN LFIKG++GW MQ +LLK+TLLSLGSGE
Sbjct: 121 DLYIPLMAFGTYVVLAGISLGLRGKFSPEALNWLFIKGMVGWCMQTALLKLTLLSLGSGE 180

Query: 177 APLLDIIAYAGYTFTGICLAVLGRIILGYSYYFLMPWTCLCMAVFLVKTMKRVLFAEVRT 236
           APLLDI+AYAGYTF G+ LA LG+II GYSYY LMPW CLCM +FLVKTMKRVLFAEVR+
Sbjct: 181 APLLDIVAYAGYTFAGMSLAALGKIISGYSYYVLMPWFCLCMGIFLVKTMKRVLFAEVRS 240

Query: 237 YDSSKHHYLLLFIALVQFPLFTWLGNITVNWLL 269
           YDSSKHHYLLLFIAL QFPLF WLGNITVNW +
Sbjct: 241 YDSSKHHYLLLFIALAQFPLFMWLGNITVNWFI 273