Miyakogusa Predicted Gene

Lj0g3v0101359.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101359.1 Non Characterized Hit- tr|D7KKP9|D7KKP9_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,30.77,1e-18,GUB_WAK_bind,Wall-associated receptor kinase
galacturonan-binding domain; seg,NULL,CUFF.5690.1
         (313 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g105550.1 | wall-associated receptor kinase galacturonan-b...   475   e-134
Medtr4g123700.1 | wall-associated receptor kinase galacturonan-b...   151   6e-37
Medtr8g090055.1 | wall-associated receptor kinase galacturonan-b...   100   1e-21
Medtr5g037310.2 | wall-associated receptor kinase galacturonan-b...    93   4e-19
Medtr5g037310.1 | wall-associated receptor kinase galacturonan-b...    92   6e-19
Medtr5g037310.3 | wall-associated receptor kinase galacturonan-b...    92   6e-19
Medtr2g023970.1 | wall-associated receptor kinase galacturonan-b...    89   5e-18
Medtr4g132450.1 | wall-associated receptor kinase galacturonan-b...    72   6e-13

>Medtr4g105550.1 | wall-associated receptor kinase
           galacturonan-binding protein | HC |
           chr4:43821421-43819595 | 20130731
          Length = 308

 Score =  475 bits (1222), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 232/306 (75%), Positives = 255/306 (83%), Gaps = 6/306 (1%)

Query: 4   SPLFFPALHHYHLIFLSALLITSCSSTQANSCRTYCGNITVDYPFATQYGCGHPGFRDLL 63
           S  F    HH  +IF  A LI   SS   N+CR+YCGNIT+DYPFA Q GCGHPGFRDLL
Sbjct: 2   SKFFTTFFHHLIIIFSIAYLIIP-SSCSNNTCRSYCGNITIDYPFALQNGCGHPGFRDLL 60

Query: 64  FCINDVLMLHIASGSYRVLEIDYAYQALTLHEPHMSTCEDLVLGAKGNGFALEPWRAAYM 123
           FCIN+VLM H+ SGSYRVL+IDYAYQALTLHEPHMSTCE LVLG KGNGFA+EPWR+ YM
Sbjct: 61  FCINNVLMFHVTSGSYRVLQIDYAYQALTLHEPHMSTCETLVLGNKGNGFAVEPWRSPYM 120

Query: 124 NPTPDNVFMLIACSPRSPLFQGFPGKHLPCRNVSGMGCEDYYGCPAWDMLGHKRXXXXXX 183
           NPTPDNVFMLI+CSPRSPLFQGFP KHLPCRNVSGMGCE+YYGCPAW+M+GHKR      
Sbjct: 121 NPTPDNVFMLISCSPRSPLFQGFPDKHLPCRNVSGMGCEEYYGCPAWNMMGHKR--TGSS 178

Query: 184 XXXXXXPPECCAVPYESIKGINLKHLDCEGYSSAYSVAPLRVDGPGDWAYGIRVRYSVQG 243
                 PPECCAV YE+IKGINL  L+CEGYSSAYSVAPL+VDGP DWAYGIRVRYSVQG
Sbjct: 179 SFFGSGPPECCAVSYEAIKGINLSKLECEGYSSAYSVAPLKVDGPSDWAYGIRVRYSVQG 238

Query: 244 SDEFCGACEATGGSCGYGSDGIRQVCMCGNFNSTSNCDSVG--ISAGA-RPVRVKMSAGL 300
           SDEFCGAC+ATGGSCGYGSDGIRQVCMCGNFNSTSNCDS    +S+GA RP+R+KM AG 
Sbjct: 239 SDEFCGACQATGGSCGYGSDGIRQVCMCGNFNSTSNCDSAVALLSSGARRPMRLKMFAGR 298

Query: 301 LACMLA 306
              +L+
Sbjct: 299 FGSVLS 304


>Medtr4g123700.1 | wall-associated receptor kinase
           galacturonan-binding protein | HC |
           chr4:50971272-50969552 | 20130731
          Length = 300

 Score =  151 bits (382), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 134/248 (54%), Gaps = 20/248 (8%)

Query: 35  CRTYCGNITVDYPFATQYGCGHPGFRDLLFCINDVLMLHIASGSYRVLEIDYAYQALTLH 94
           C+T CG I ++YPF+ + GCG P FR++  C    L     SGSY+V  IDY  +++ L+
Sbjct: 34  CKTSCGTIPINYPFSLEDGCGAPQFRNMFNCTTTELFFQTPSGSYKVQSIDYNKKSMVLY 93

Query: 95  EPHMSTCEDLVLGAKGNGFALEPWRAAYMNPTPDNVFMLIACSPRSPLFQGFPGKHLPCR 154
           +P MSTC  L      + F +   ++A + P+ D VF+L+ CS  SP+   +  K+L C 
Sbjct: 94  DPSMSTCSIL---QPHHDFLMTDIQSAIIPPSQDTVFVLLNCSIDSPVLNHY--KYL-CF 147

Query: 155 NVSGMGCEDYY-GCPAWDMLGHKRXXXXXXXXXXXXPPECCAVPYESIKGINLKHLDCEG 213
           N  G  C++ Y GC A+ +                  P CC   Y ++K +++  LDC  
Sbjct: 148 NFEGHTCDELYGGCNAFRVF----------HLMTNSSPPCCFTSYNTMKFMSMNILDCTH 197

Query: 214 YSSAYSVAPLRVDGPGDWAYGIRVRYSVQGSDEFCGACEATGGSCGYGSDGIRQVCMCGN 273
           Y+S ++   LR  GP DW YGI++ +SV   D  C +C  +GG CG+ ++    +C+C +
Sbjct: 198 YTSVFNSDKLRGVGPLDWVYGIKLSFSV--PDTGCESCGQSGGICGFDTETEALLCLCSS 255

Query: 274 F-NSTSNC 280
           F NST  C
Sbjct: 256 FTNSTRGC 263


>Medtr8g090055.1 | wall-associated receptor kinase
           galacturonan-binding protein | HC |
           chr8:37696302-37697636 | 20130731
          Length = 300

 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 115/277 (41%), Gaps = 37/277 (13%)

Query: 16  LIFLSALLITSCSSTQANSCRTYCGNITVDYPFATQYGCGHPGFRDLLFCIN----DVLM 71
           L F   LL+ S  +     C   CG+I V YPF T  GCG P F   + C +    D L+
Sbjct: 11  LNFFMILLLASPPTASTPVCHDTCGSIQVKYPFGTGPGCGSPLFNPYITCTSNGTLDQLI 70

Query: 72  LHIASGSYRVLEIDYAYQALTLHEPHMSTCEDLVLGAKGNGFALEPWRAAYMNPTPDNVF 131
           L   + SY +  I Y    L L  P+MSTC  +            P++ +       + F
Sbjct: 71  LKTHTSSYPITSISYTTSTLILTPPYMSTCTTMQTSPNFGIDLTAPFQIS------SSTF 124

Query: 132 MLIACSPRSPLFQGFPGKHLPCRNVSGMGCEDYYGCPAWDMLGHKRXXXXXXXXXXXXPP 191
           +L+ C  +S            C       C   Y CP    LG                 
Sbjct: 125 ILLHCQVKSSTI---------CDTSFDYLCASLYSCPEVVSLGMPLFSPTN--------- 166

Query: 192 ECCAVPYESIKG---INLKHLDCEGYSSAYSVAPLRVDGPGDWAYGIRVRYSVQGSDEF- 247
            CC     ++ G   +NL+  DC GY+S  S+     D P  W YG+ ++Y+    D+  
Sbjct: 167 TCCVYSPGNLDGKGELNLRENDCSGYTSVVSLGDNPTD-PTHWVYGVALKYTHGVFDDIV 225

Query: 248 ---CGACEATGGSCGYGSDGIRQVCMCGN-FNSTSNC 280
              C +CE++GG CGY   G   VC+C + +N++ +C
Sbjct: 226 TTKCTSCESSGGVCGYAPPGSGFVCVCKSGYNTSLDC 262


>Medtr5g037310.2 | wall-associated receptor kinase
           galacturonan-binding protein | HC |
           chr5:16324843-16321803 | 20130731
          Length = 301

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 120/286 (41%), Gaps = 36/286 (12%)

Query: 10  ALHHYHLIFLSALLITSCSSTQANSCRTYCGNITVDYPFATQYGCGHPGFRDLLFCINDV 69
            L +  L  L+  L    S  ++  C+  CG  T+ YPF +  GCG P F+  + C    
Sbjct: 2   KLSYPSLPLLTIFLFLLPSLIKSQMCQRNCGKETLKYPFGSGPGCGDPRFQPHITCSQQK 61

Query: 70  LMLHIASGSYRVLEIDYAYQALTLHEPHMSTCEDLVLGAKGNGFALEPWRAAYMNPTPDN 129
           L     +GSY +  IDYA Q + + +P MSTC    L +KG G     W A +       
Sbjct: 62  LTFTTHTGSYPITSIDYANQVIYISDPTMSTCS-CTLPSKGFGLD---WNAPFTF-DDST 116

Query: 130 VFMLIACSP------RSPLFQGFPGKHLPCRNVSGMGCEDYYGCPAWDMLGHKRXXXXXX 183
           +F L+ CS       +S  +       L C   + + C+  Y C                
Sbjct: 117 IFALVDCSMNSSSICKSRSYDDGSNSKLQCDQNTQI-CDVMYSC-------------RPI 162

Query: 184 XXXXXXPPECCAVPYESIK-----GINLKHLDCEGYSSAYSVAPLRVDGPGDWAYGIRVR 238
                 P   C V Y  +       ++L+ L C  Y+  Y+    +VD P  W YGI ++
Sbjct: 163 STNINLPISTCCV-YTPVNLGPAFDMDLQKLQCSSYTGFYNYNDQQVD-PEKWNYGIALK 220

Query: 239 YSVQGSDEF---CGACEATGGSCGYGSDGIRQVCMCGN-FNSTSNC 280
           Y    ++++   C ACE + G CGY       +C C N  N+T++C
Sbjct: 221 YKFSVTNDYPSSCAACERSFGFCGYSEAYNSFLCNCPNGINTTTDC 266


>Medtr5g037310.1 | wall-associated receptor kinase
           galacturonan-binding protein | HC |
           chr5:16324777-16323236 | 20130731
          Length = 296

 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 36/286 (12%)

Query: 10  ALHHYHLIFLSALLITSCSSTQANSCRTYCGNITVDYPFATQYGCGHPGFRDLLFCINDV 69
            L +  L  L+  L    S  ++  C+  CG  T+ YPF +  GCG P F+  + C    
Sbjct: 2   KLSYPSLPLLTIFLFLLPSLIKSQMCQRNCGKETLKYPFGSGPGCGDPRFQPHITCSQQK 61

Query: 70  LMLHIASGSYRVLEIDYAYQALTLHEPHMSTCEDLVLGAKGNGFALEPWRAAYMNPTPDN 129
           L     +GSY +  IDYA Q + + +P MSTC    L +K  GF L+ W A +       
Sbjct: 62  LTFTTHTGSYPITSIDYANQVIYISDPTMSTCS-CTLPSK--GFGLD-WNAPFTF-DDST 116

Query: 130 VFMLIACSP------RSPLFQGFPGKHLPCRNVSGMGCEDYYGCPAWDMLGHKRXXXXXX 183
           +F L+ CS       +S  +       L C   + + C+  Y C                
Sbjct: 117 IFALVDCSMNSSSICKSRSYDDGSNSKLQCDQNTQI-CDVMYSC-------------RPI 162

Query: 184 XXXXXXPPECCAVPYESIK-----GINLKHLDCEGYSSAYSVAPLRVDGPGDWAYGIRVR 238
                 P   C V Y  +       ++L+ L C  Y+  Y+    +VD P  W YGI ++
Sbjct: 163 STNINLPISTCCV-YTPVNLGPAFDMDLQKLQCSSYTGFYNYNDQQVD-PEKWNYGIALK 220

Query: 239 YSVQGSDEF---CGACEATGGSCGYGSDGIRQVCMCGN-FNSTSNC 280
           Y    ++++   C ACE + G CGY       +C C N  N+T++C
Sbjct: 221 YKFSVTNDYPSSCAACERSFGFCGYSEAYNSFLCNCPNGINTTTDC 266


>Medtr5g037310.3 | wall-associated receptor kinase
           galacturonan-binding protein | HC |
           chr5:16324843-16323206 | 20130731
          Length = 296

 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/286 (27%), Positives = 122/286 (42%), Gaps = 36/286 (12%)

Query: 10  ALHHYHLIFLSALLITSCSSTQANSCRTYCGNITVDYPFATQYGCGHPGFRDLLFCINDV 69
            L +  L  L+  L    S  ++  C+  CG  T+ YPF +  GCG P F+  + C    
Sbjct: 2   KLSYPSLPLLTIFLFLLPSLIKSQMCQRNCGKETLKYPFGSGPGCGDPRFQPHITCSQQK 61

Query: 70  LMLHIASGSYRVLEIDYAYQALTLHEPHMSTCEDLVLGAKGNGFALEPWRAAYMNPTPDN 129
           L     +GSY +  IDYA Q + + +P MSTC    L +K  GF L+ W A +       
Sbjct: 62  LTFTTHTGSYPITSIDYANQVIYISDPTMSTCS-CTLPSK--GFGLD-WNAPFTF-DDST 116

Query: 130 VFMLIACSP------RSPLFQGFPGKHLPCRNVSGMGCEDYYGCPAWDMLGHKRXXXXXX 183
           +F L+ CS       +S  +       L C   + + C+  Y C                
Sbjct: 117 IFALVDCSMNSSSICKSRSYDDGSNSKLQCDQNTQI-CDVMYSC-------------RPI 162

Query: 184 XXXXXXPPECCAVPYESIK-----GINLKHLDCEGYSSAYSVAPLRVDGPGDWAYGIRVR 238
                 P   C V Y  +       ++L+ L C  Y+  Y+    +VD P  W YGI ++
Sbjct: 163 STNINLPISTCCV-YTPVNLGPAFDMDLQKLQCSSYTGFYNYNDQQVD-PEKWNYGIALK 220

Query: 239 YSVQGSDEF---CGACEATGGSCGYGSDGIRQVCMCGN-FNSTSNC 280
           Y    ++++   C ACE + G CGY       +C C N  N+T++C
Sbjct: 221 YKFSVTNDYPSSCAACERSFGFCGYSEAYNSFLCNCPNGINTTTDC 266


>Medtr2g023970.1 | wall-associated receptor kinase
           galacturonan-binding protein | HC | chr2:8514790-8516482
           | 20130731
          Length = 320

 Score = 89.0 bits (219), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 37/282 (13%)

Query: 28  SSTQANSCRTYCGNITVDYPFATQYGCGHPGFRDLLFCIN--DVLMLHIASGSYRVLEID 85
           + +Q++ CRT C NI++ YPF+   GCG P +R +L C +    L L   SG Y V  I 
Sbjct: 17  TKSQSSICRTSCANISIKYPFSIDDGCGSPYYRHILSCSDSEKKLELRTPSGRYEVRNIS 76

Query: 86  YAYQALTLHEPHMSTCEDLVLGAKGNGFALEPWRAAYMNPTPDNVFMLIACSPRSPLFQG 145
           YA   + + +P M  CED         F+L+   +  +  +  N +M   CS +  + Q 
Sbjct: 77  YADPHIVVTDPFMWKCEDGENFRPTRPFSLD--TSTKLKLSTQNEYMFFNCSEKHVIIQP 134

Query: 146 FPG--KHLP------CRNVSGMGCEDYYGCPAWDMLGHKRXXXXXXXXXXXXPPECCAVP 197
            P   +H P      C + S + C    GC                         CC+  
Sbjct: 135 KPMFCEHFPEHCDSSCESASYL-CRHLPGC-----------------SFSLTSSSCCSYY 176

Query: 198 YESIKGINLKHLDCEGYSSAYSVAPLRVDGPGDWA--YGIRVRYSVQGSDEFCGACEAT- 254
            ++ + + L    C  Y+S Y    +    P D    YGIRV + +  +   C  C+ T 
Sbjct: 177 PKASESLRLMLKYCTSYASVY-WRDVGFPQPYDQVPEYGIRVDFDIPVTTH-CLQCQDTM 234

Query: 255 --GGSCGYGSDGIRQVCMCGNFNSTSNCDSVGISAGARPVRV 294
             GG+CG+ +     +C+C + NST++C    I+   R V V
Sbjct: 235 KGGGTCGFDTVTQSFMCLCKDGNSTTHCKDQEIAQHNRKVHV 276


>Medtr4g132450.1 | wall-associated receptor kinase
           galacturonan-binding protein | HC |
           chr4:55370730-55372459 | 20130731
          Length = 334

 Score = 72.4 bits (176), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 116/282 (41%), Gaps = 37/282 (13%)

Query: 28  SSTQANSCRTYCGNITVDYPFATQYGCGHPGFRDLLFCIN-DVLMLHIASGSYRVLEIDY 86
           + +Q+  CRT CG+I + YPF+   GCG P +R +L C +   L L   SG Y +  + Y
Sbjct: 31  TKSQSTLCRTSCGSIPIQYPFSIDDGCGSPYYRFILSCSDTQKLELRTPSGRYPIHNVSY 90

Query: 87  AYQALTLHEPHMSTCEDLVLGAKGNGFALEPWRAAYMNPTPDNVFMLIACS-------PR 139
               + + +P M  CED V       F+L+   +     +  N ++   CS       P+
Sbjct: 91  IDPHIVVTDPFMWNCEDGVNYRPTRPFSLD--TSTRFKLSSQNQYIFFNCSEEKVIVKPK 148

Query: 140 SPLFQGFPGKHLPCRNVSGMGCEDYYGCPAWDMLGHKRXXXXXXXXXXXXPPECCAVPYE 199
               + FP       + +   C     C ++ M G                  CC+   +
Sbjct: 149 PVFCEQFPEHCDSSCDSASYLCRHLPEC-SFAMSGS----------------SCCSYKPK 191

Query: 200 SIKGINLKHLDCEGYSSAYSV---APLRVDGPGDWAYGIRVRYSVQGSDEFCGACEAT-- 254
           + + + L    C  Y+S Y     AP   D      YGIR+ + +  +   C  C+    
Sbjct: 192 ATESLRLMLEYCTSYASVYWRNVGAPQLYDQVPQ--YGIRIDFDIPVTTR-CLQCQDQSK 248

Query: 255 --GGSCGYGSDGIRQVCMCGNFNSTSNCDSVGISAGARPVRV 294
             GG+CG+ +     +C+C   N T++C+    +  +R V V
Sbjct: 249 GGGGTCGFDTQTQSFLCLCKEGNFTTHCNDHENARHSRNVHV 290