Miyakogusa Predicted Gene

Lj0g3v0101239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0101239.1 Non Characterized Hit- tr|I0YU80|I0YU80_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,30.22,0.0000001,no description,Six-bladed beta-propeller,
TolB-like; YWTD domain,NULL,CUFF.5678.1
         (405 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g022660.2 | NHL domain protein | HC | chr4:7602882-7593407...   566   e-162
Medtr4g022660.1 | NHL domain protein | HC | chr4:7602882-7593407...   566   e-161
Medtr7g026915.1 | NHL repeat protein | HC | chr7:8958784-8968593...   561   e-160
Medtr4g022660.3 | NHL domain protein | HC | chr4:7603212-7593393...   438   e-123
Medtr7g026915.2 | NHL repeat protein | HC | chr7:8958784-8968593...   438   e-123
Medtr7g112140.1 | haloacid dehalogenase-like hydrolase family pr...    53   5e-07
Medtr7g112140.3 | haloacid dehalogenase-like hydrolase family pr...    53   6e-07
Medtr7g112140.2 | haloacid dehalogenase-like hydrolase family pr...    53   6e-07

>Medtr4g022660.2 | NHL domain protein | HC | chr4:7602882-7593407 |
           20130731
          Length = 626

 Score =  566 bits (1460), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 284/407 (69%), Positives = 332/407 (81%), Gaps = 5/407 (1%)

Query: 1   MDCIGSSPGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETLFP 60
           MDCIGSSPGFEDG FESAKLRRPAGSYY+A+EDCLYF+DSENHAIR+ADM AR VETL+P
Sbjct: 163 MDCIGSSPGFEDGDFESAKLRRPAGSYYNATEDCLYFLDSENHAIRRADMEARLVETLYP 222

Query: 61  ASVTSKGGGVWNWIMNKLGLESSEETNVEERSEVFDSKSLYFPWHLLKSVDDTLYIID-R 119
            S  +KGGG++NWI+NKLGLE+S      E+SEV D K LYFPWHLLKS DD    I  R
Sbjct: 223 ISTDNKGGGIFNWILNKLGLETSVRN--MEKSEVLDPKRLYFPWHLLKSDDDDTIYIIDR 280

Query: 120 RFQTLWTMDFSSGKINEVLEGS-RILEICGQPIMKNLSILDQIPCDWFPKKPDNGNLLEG 178
           RFQTLWTMD  SGK++++ EGS +ILEICGQ I +NLS  D+IPCD F +K +N   L+G
Sbjct: 281 RFQTLWTMDSGSGKVDKIFEGSPKILEICGQLIRQNLSTFDKIPCDQFQQKTNNVFALDG 340

Query: 179 IPRSDLLSSLTTLQNHIFICDTVGQRIVKVNEESKVCVNFQLCNLGILGLPYWLNSPLET 238
           +P SD LSSLTTLQNH+FICD V QRI+KVN ES VC++FQL N G+LG PYWLNSPLET
Sbjct: 341 LPHSDRLSSLTTLQNHMFICDKVRQRILKVNIESGVCLDFQLSNFGLLGFPYWLNSPLET 400

Query: 239 YYAVGNGLLGTAIDHIQHFDFLPGKIDIQLSVNVPLDIELVEPLQESCIWRQARGAATEI 298
            YA GNGL  TAIDH+Q FD LPG IDI+LSV+V  DIE+VEPL ESCIWRQARGAA EI
Sbjct: 401 CYAGGNGLSDTAIDHLQQFDLLPGNIDIKLSVDVHADIEVVEPLHESCIWRQARGAAAEI 460

Query: 299 SGMDDVPGSLEKVGAAQQWYDELDYLAAPKPESEMTVDVDNLDKKSVVEDEGVRISCGVC 358
           +GMDD P S++KVG AQQWYDELD LA+PK + E  V  D+LD+ + +ED+ +RI+  V 
Sbjct: 461 TGMDD-PRSMDKVGVAQQWYDELDDLASPKADPESEVTEDDLDQNTAMEDDKIRINSCVG 519

Query: 359 TSPGTSEVIVYAVLYCKLRRDPNSNDGNRVKHAARILDILSSKRSGK 405
           TSPGTSEVI++AVLYCKLR+ PNSNDGN+ K+AARILD LSSKRSGK
Sbjct: 520 TSPGTSEVIIFAVLYCKLRKIPNSNDGNQEKYAARILDFLSSKRSGK 566


>Medtr4g022660.1 | NHL domain protein | HC | chr4:7602882-7593407 |
           20130731
          Length = 752

 Score =  566 bits (1459), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 284/407 (69%), Positives = 332/407 (81%), Gaps = 5/407 (1%)

Query: 1   MDCIGSSPGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETLFP 60
           MDCIGSSPGFEDG FESAKLRRPAGSYY+A+EDCLYF+DSENHAIR+ADM AR VETL+P
Sbjct: 289 MDCIGSSPGFEDGDFESAKLRRPAGSYYNATEDCLYFLDSENHAIRRADMEARLVETLYP 348

Query: 61  ASVTSKGGGVWNWIMNKLGLESSEETNVEERSEVFDSKSLYFPWHLLKSVDDTLYIID-R 119
            S  +KGGG++NWI+NKLGLE+S      E+SEV D K LYFPWHLLKS DD    I  R
Sbjct: 349 ISTDNKGGGIFNWILNKLGLETSVRN--MEKSEVLDPKRLYFPWHLLKSDDDDTIYIIDR 406

Query: 120 RFQTLWTMDFSSGKINEVLEGS-RILEICGQPIMKNLSILDQIPCDWFPKKPDNGNLLEG 178
           RFQTLWTMD  SGK++++ EGS +ILEICGQ I +NLS  D+IPCD F +K +N   L+G
Sbjct: 407 RFQTLWTMDSGSGKVDKIFEGSPKILEICGQLIRQNLSTFDKIPCDQFQQKTNNVFALDG 466

Query: 179 IPRSDLLSSLTTLQNHIFICDTVGQRIVKVNEESKVCVNFQLCNLGILGLPYWLNSPLET 238
           +P SD LSSLTTLQNH+FICD V QRI+KVN ES VC++FQL N G+LG PYWLNSPLET
Sbjct: 467 LPHSDRLSSLTTLQNHMFICDKVRQRILKVNIESGVCLDFQLSNFGLLGFPYWLNSPLET 526

Query: 239 YYAVGNGLLGTAIDHIQHFDFLPGKIDIQLSVNVPLDIELVEPLQESCIWRQARGAATEI 298
            YA GNGL  TAIDH+Q FD LPG IDI+LSV+V  DIE+VEPL ESCIWRQARGAA EI
Sbjct: 527 CYAGGNGLSDTAIDHLQQFDLLPGNIDIKLSVDVHADIEVVEPLHESCIWRQARGAAAEI 586

Query: 299 SGMDDVPGSLEKVGAAQQWYDELDYLAAPKPESEMTVDVDNLDKKSVVEDEGVRISCGVC 358
           +GMDD P S++KVG AQQWYDELD LA+PK + E  V  D+LD+ + +ED+ +RI+  V 
Sbjct: 587 TGMDD-PRSMDKVGVAQQWYDELDDLASPKADPESEVTEDDLDQNTAMEDDKIRINSCVG 645

Query: 359 TSPGTSEVIVYAVLYCKLRRDPNSNDGNRVKHAARILDILSSKRSGK 405
           TSPGTSEVI++AVLYCKLR+ PNSNDGN+ K+AARILD LSSKRSGK
Sbjct: 646 TSPGTSEVIIFAVLYCKLRKIPNSNDGNQEKYAARILDFLSSKRSGK 692


>Medtr7g026915.1 | NHL repeat protein | HC | chr7:8958784-8968593 |
           20130731
          Length = 753

 Score =  561 bits (1446), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 282/407 (69%), Positives = 332/407 (81%), Gaps = 5/407 (1%)

Query: 1   MDCIGSSPGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETLFP 60
           MDCIGSSPGFEDG FESAKLRRPAGSYY+A+EDCLYF+DSENHAIR+ADM AR VETL+P
Sbjct: 290 MDCIGSSPGFEDGDFESAKLRRPAGSYYNATEDCLYFLDSENHAIRRADMEARLVETLYP 349

Query: 61  ASVTSKGGGVWNWIMNKLGLESSEETNVEERSEVFDSKSLYFPWHLLKSVDDTLYIID-R 119
            S  +KGGG++NWI+NKLGLE+S      E+SEV D K LYFPWHLLKS DD    I  R
Sbjct: 350 ISTDNKGGGIFNWILNKLGLETSVRN--MEKSEVLDPKRLYFPWHLLKSDDDDTIYIIDR 407

Query: 120 RFQTLWTMDFSSGKINEVLEGS-RILEICGQPIMKNLSILDQIPCDWFPKKPDNGNLLEG 178
           RFQTLWTMD  SGK++++ EGS +ILEICGQ I +NLS  D+IPCD F +K +N   L+G
Sbjct: 408 RFQTLWTMDSGSGKVDKIFEGSPKILEICGQLIRQNLSTFDKIPCDQFQQKTNNVFALDG 467

Query: 179 IPRSDLLSSLTTLQNHIFICDTVGQRIVKVNEESKVCVNFQLCNLGILGLPYWLNSPLET 238
           +P SD LSSLTTLQNH+FICD V QRI+KVN ES VC++F+L N G+LG PYWLNSPLET
Sbjct: 468 LPHSDRLSSLTTLQNHMFICDKVRQRILKVNIESGVCLDFELSNFGLLGFPYWLNSPLET 527

Query: 239 YYAVGNGLLGTAIDHIQHFDFLPGKIDIQLSVNVPLDIELVEPLQESCIWRQARGAATEI 298
            YA GNGL  TAIDH+Q FD LPG IDI+LSV+V  DIE+VEPL+ESCIWRQARGAA EI
Sbjct: 528 CYAGGNGLSDTAIDHLQQFDLLPGNIDIKLSVDVHADIEVVEPLRESCIWRQARGAAAEI 587

Query: 299 SGMDDVPGSLEKVGAAQQWYDELDYLAAPKPESEMTVDVDNLDKKSVVEDEGVRISCGVC 358
           +GMDD P S++KVG AQQWYDELD LA+PK + E  V  D+LD+ + +ED+ +RI+  V 
Sbjct: 588 TGMDD-PRSMDKVGVAQQWYDELDDLASPKADPESEVIEDDLDQNTAMEDDKIRINSCVG 646

Query: 359 TSPGTSEVIVYAVLYCKLRRDPNSNDGNRVKHAARILDILSSKRSGK 405
           TSPGTSEVI++AVLYCKLR+ PNSN GN+ K+AARILD LSSKRSGK
Sbjct: 647 TSPGTSEVIIFAVLYCKLRKIPNSNYGNQEKYAARILDFLSSKRSGK 693


>Medtr4g022660.3 | NHL domain protein | HC | chr4:7603212-7593393 |
           20130731
          Length = 607

 Score =  438 bits (1127), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 221/313 (70%), Positives = 255/313 (81%), Gaps = 5/313 (1%)

Query: 1   MDCIGSSPGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETLFP 60
           MDCIGSSPGFEDG FESAKLRRPAGSYY+A+EDCLYF+DSENHAIR+ADM AR VETL+P
Sbjct: 289 MDCIGSSPGFEDGDFESAKLRRPAGSYYNATEDCLYFLDSENHAIRRADMEARLVETLYP 348

Query: 61  ASVTSKGGGVWNWIMNKLGLESSEETNVEERSEVFDSKSLYFPWHLLKSVDDTLYIID-R 119
            S  +KGGG++NWI+NKLGLE+S      E+SEV D K LYFPWHLLKS DD    I  R
Sbjct: 349 ISTDNKGGGIFNWILNKLGLETSVRN--MEKSEVLDPKRLYFPWHLLKSDDDDTIYIIDR 406

Query: 120 RFQTLWTMDFSSGKINEVLEGS-RILEICGQPIMKNLSILDQIPCDWFPKKPDNGNLLEG 178
           RFQTLWTMD  SGK++++ EGS +ILEICGQ I +NLS  D+IPCD F +K +N   L+G
Sbjct: 407 RFQTLWTMDSGSGKVDKIFEGSPKILEICGQLIRQNLSTFDKIPCDQFQQKTNNVFALDG 466

Query: 179 IPRSDLLSSLTTLQNHIFICDTVGQRIVKVNEESKVCVNFQLCNLGILGLPYWLNSPLET 238
           +P SD LSSLTTLQNH+FICD V QRI+KVN ES VC++FQL N G+LG PYWLNSPLET
Sbjct: 467 LPHSDRLSSLTTLQNHMFICDKVRQRILKVNIESGVCLDFQLSNFGLLGFPYWLNSPLET 526

Query: 239 YYAVGNGLLGTAIDHIQHFDFLPGKIDIQLSVNVPLDIELVEPLQESCIWRQARGAATEI 298
            YA GNGL  TAIDH+Q FD LPG IDI+LSV+V  DIE+VEPL ESCIWRQARGAA EI
Sbjct: 527 CYAGGNGLSDTAIDHLQQFDLLPGNIDIKLSVDVHADIEVVEPLHESCIWRQARGAAAEI 586

Query: 299 SGMDDVPGSLEKV 311
           +GMDD P S++KV
Sbjct: 587 TGMDD-PRSMDKV 598


>Medtr7g026915.2 | NHL repeat protein | HC | chr7:8958784-8968593 |
           20130731
          Length = 608

 Score =  438 bits (1126), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/313 (70%), Positives = 256/313 (81%), Gaps = 5/313 (1%)

Query: 1   MDCIGSSPGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETLFP 60
           MDCIGSSPGFEDG FESAKLRRPAGSYY+A+EDCLYF+DSENHAIR+ADM AR VETL+P
Sbjct: 290 MDCIGSSPGFEDGDFESAKLRRPAGSYYNATEDCLYFLDSENHAIRRADMEARLVETLYP 349

Query: 61  ASVTSKGGGVWNWIMNKLGLESSEETNVEERSEVFDSKSLYFPWHLLKSVDDTLYIID-R 119
            S  +KGGG++NWI+NKLGLE+S      E+SEV D K LYFPWHLLKS DD    I  R
Sbjct: 350 ISTDNKGGGIFNWILNKLGLETSVRN--MEKSEVLDPKRLYFPWHLLKSDDDDTIYIIDR 407

Query: 120 RFQTLWTMDFSSGKINEVLEGS-RILEICGQPIMKNLSILDQIPCDWFPKKPDNGNLLEG 178
           RFQTLWTMD  SGK++++ EGS +ILEICGQ I +NLS  D+IPCD F +K +N   L+G
Sbjct: 408 RFQTLWTMDSGSGKVDKIFEGSPKILEICGQLIRQNLSTFDKIPCDQFQQKTNNVFALDG 467

Query: 179 IPRSDLLSSLTTLQNHIFICDTVGQRIVKVNEESKVCVNFQLCNLGILGLPYWLNSPLET 238
           +P SD LSSLTTLQNH+FICD V QRI+KVN ES VC++F+L N G+LG PYWLNSPLET
Sbjct: 468 LPHSDRLSSLTTLQNHMFICDKVRQRILKVNIESGVCLDFELSNFGLLGFPYWLNSPLET 527

Query: 239 YYAVGNGLLGTAIDHIQHFDFLPGKIDIQLSVNVPLDIELVEPLQESCIWRQARGAATEI 298
            YA GNGL  TAIDH+Q FD LPG IDI+LSV+V  DIE+VEPL+ESCIWRQARGAA EI
Sbjct: 528 CYAGGNGLSDTAIDHLQQFDLLPGNIDIKLSVDVHADIEVVEPLRESCIWRQARGAAAEI 587

Query: 299 SGMDDVPGSLEKV 311
           +GMDD P S++KV
Sbjct: 588 TGMDD-PRSMDKV 599


>Medtr7g112140.1 | haloacid dehalogenase-like hydrolase family
           protein | HC | chr7:46103790-46120290 | 20130731
          Length = 1081

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 4   IGSS--PGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETL 58
           IGSS   G +DG F+ A   RP G  Y+A ++ LY  D+ENHA+R+ D     V TL
Sbjct: 630 IGSSGEEGLQDGSFDEATFNRPQGLAYNAKKNILYVADTENHALREIDFANEKVRTL 686


>Medtr7g112140.3 | haloacid dehalogenase-like hydrolase family
           protein | HC | chr7:46103752-46121585 | 20130731
          Length = 1059

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 4   IGSS--PGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETL 58
           IGSS   G +DG F+ A   RP G  Y+A ++ LY  D+ENHA+R+ D     V TL
Sbjct: 608 IGSSGEEGLQDGSFDEATFNRPQGLAYNAKKNILYVADTENHALREIDFANEKVRTL 664


>Medtr7g112140.2 | haloacid dehalogenase-like hydrolase family
           protein | HC | chr7:46103752-46121563 | 20130731
          Length = 1059

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 4   IGSS--PGFEDGYFESAKLRRPAGSYYHASEDCLYFVDSENHAIRKADMGARTVETL 58
           IGSS   G +DG F+ A   RP G  Y+A ++ LY  D+ENHA+R+ D     V TL
Sbjct: 608 IGSSGEEGLQDGSFDEATFNRPQGLAYNAKKNILYVADTENHALREIDFANEKVRTL 664