Miyakogusa Predicted Gene
- Lj0g3v0101139.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0101139.1 tr|G7JIC6|G7JIC6_MEDTR Replication factor A
protein OS=Medicago truncatula GN=MTR_4g028320 PE=4
SV=1,29.68,5e-18,Nucleic acid-binding proteins,Nucleic acid-binding,
OB-fold-like; seg,NULL; no description,Nucleic a,CUFF.5671.1
(345 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g062030.1 | replication factor-A carboxy-terminal domain p... 145 6e-35
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p... 138 6e-33
Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 | 20... 121 1e-27
Medtr1g075850.1 | replication factor-A carboxy-terminal domain p... 119 5e-27
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p... 103 3e-22
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p... 92 7e-19
Medtr2g054710.1 | animal RPA1 domain protein | LC | chr2:2336383... 92 7e-19
Medtr8g479260.1 | replication factor-A carboxy-terminal domain p... 92 1e-18
Medtr2g008650.1 | replication factor-A carboxy-terminal domain p... 92 1e-18
Medtr8g059025.1 | animal RPA1 domain protein | LC | chr8:2054987... 86 5e-17
Medtr6g039240.1 | animal RPA1 domain protein | LC | chr6:1418076... 86 6e-17
Medtr1g094230.1 | animal RPA1 domain protein | LC | chr1:4243647... 85 8e-17
Medtr8g062060.1 | DUF223 domain protein | LC | chr8:25911934-259... 85 1e-16
Medtr8g463820.1 | animal RPA1 domain protein | LC | chr8:2251463... 85 1e-16
Medtr3g056240.1 | DUF223 domain protein | HC | chr3:22396065-223... 84 2e-16
Medtr6g051890.1 | replication factor-A carboxy-terminal domain p... 84 3e-16
Medtr3g056270.1 | replication factor-A carboxy-terminal domain p... 81 1e-15
Medtr8g088810.1 | DUF223 domain protein | LC | chr8:36895897-368... 80 3e-15
Medtr3g037500.1 | transmembrane protein, putative | LC | chr3:13... 76 4e-14
Medtr3g044760.1 | DUF223 domain protein | LC | chr3:14435139-144... 75 9e-14
Medtr8g467450.1 | animal RPA1 domain protein | LC | chr8:2424111... 75 1e-13
Medtr6g069230.1 | animal RPA1 domain protein | LC | chr6:2491560... 73 3e-13
Medtr2g062200.1 | DUF223 domain protein | LC | chr2:26248587-262... 73 4e-13
Medtr2g048550.1 | replication factor-A carboxy-terminal domain p... 69 5e-12
Medtr7g089660.1 | animal RPA1 domain protein | LC | chr7:3511416... 69 7e-12
Medtr8g036090.1 | animal RPA1 domain protein | HC | chr8:1327908... 66 6e-11
Medtr4g471610.1 | animal RPA1 domain protein | HC | chr4:2707183... 66 6e-11
Medtr3g078440.1 | animal RPA1 domain protein | HC | chr3:3535014... 66 6e-11
Medtr1g052715.1 | DUF223 domain protein | LC | chr1:21677037-216... 65 7e-11
Medtr7g110100.1 | replication factor-A carboxy-terminal domain p... 65 9e-11
Medtr8g096680.1 | animal RPA1 domain protein | HC | chr8:4055821... 65 1e-10
Medtr1g036740.1 | animal RPA1 domain protein | HC | chr1:1349734... 65 1e-10
Medtr4g028320.1 | animal RPA1 domain protein | LC | chr4:9767872... 63 4e-10
Medtr3g452170.1 | DUF223 domain protein | HC | chr3:18995882-189... 63 4e-10
Medtr1g105785.1 | replication factor-A carboxy-terminal domain p... 63 4e-10
Medtr3g116750.1 | animal RPA1 domain protein | HC | chr3:5461096... 62 1e-09
Medtr3g095950.1 | animal RPA1 domain protein | HC | chr3:4384560... 62 1e-09
Medtr6g465570.1 | animal RPA1 domain protein | LC | chr6:2333006... 60 4e-09
Medtr4g046077.1 | replication factor-A carboxy-terminal domain p... 59 8e-09
Medtr7g093810.1 | animal RPA1 domain protein | HC | chr7:3731542... 58 1e-08
Medtr5g085220.1 | animal RPA1 domain protein | LC | chr5:3678902... 57 2e-08
Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268... 56 4e-08
Medtr8g469510.1 | PIF1 DNA helicase/replication A1-like protein,... 56 4e-08
Medtr5g055160.1 | animal RPA1 domain protein | LC | chr5:2272064... 56 5e-08
Medtr4g036240.2 | replication factor-A carboxy-terminal domain p... 55 7e-08
Medtr1788s0010.1 | animal RPA1 domain protein | LC | scaffold178... 55 1e-07
Medtr1g050500.1 | replication factor-A carboxy-terminal domain p... 54 2e-07
Medtr3g055660.1 | plant OB fold protein | LC | chr3:21910372-219... 54 2e-07
Medtr4g014890.1 | DUF223 domain protein | LC | chr4:4267608-4264... 54 2e-07
Medtr0032s0020.1 | PIF1-like helicase | LC | scaffold0032:18195-... 54 3e-07
Medtr4g109580.1 | replication protein A 70 kDa protein | HC | ch... 52 9e-07
Medtr4g109580.2 | replication protein A 70 kDa protein | HC | ch... 52 1e-06
Medtr7g117425.1 | animal RPA1 domain protein | LC | chr7:4855438... 51 2e-06
Medtr2g032570.1 | animal RPA1 domain protein | LC | chr2:1225599... 51 2e-06
Medtr2g041270.1 | replication protein A 70 kDa protein | HC | ch... 50 2e-06
Medtr7g096440.1 | PIF1-like helicase | LC | chr7:38691556-386937... 50 2e-06
Medtr7g051400.1 | replication factor-A carboxy-terminal domain p... 50 3e-06
Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944... 50 4e-06
Medtr5g004860.1 | replication factor-A carboxy-terminal domain p... 50 5e-06
Medtr8g465040.1 | animal RPA1 domain protein | LC | chr8:2310582... 49 5e-06
>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:25901653-25904109 | 20130731
Length = 575
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 130/239 (54%)
Query: 8 DHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRK 67
D D+ P + NW I W +P + + SLEMV +D+ KIQA + K +
Sbjct: 6 DLVNDIVPGRLNWRIRVRVVRMWEVPTFLKPNQANSLEMVLLDQMGVKIQAIVRKQLIYV 65
Query: 68 WADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTP 127
+ + EG VY I +F+V P+ GSYRAA H Y+I+F TKV +IP GLS +
Sbjct: 66 FQKRLREGEVYNISYFSVAPSTGSYRAATHPYKIVFQMTTKVQSCTSATIPLYGLSFTSI 125
Query: 128 LQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVS 187
+ + D+LVDV+G +TAVS R V+ S K+++ E+ D +G + + G+ V+
Sbjct: 126 VDVSNHTVEYDYLVDVMGLVTAVSEEREYVRDGSVTKMIIFEVTDHSGKIECALFGEYVA 185
Query: 188 VVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMNG 246
+ + ++S + P+VVVQ+AK+K F K L + + + +N + E AF+ R+ G
Sbjct: 186 LWNGFVSKGFEGLPVVVVQFAKVKIFRDKATLQNVKGTTRLIVNPDVPEVIAFKDRLIG 244
>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:33436158-33438920 | 20130731
Length = 517
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 120/233 (51%)
Query: 19 NWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVY 78
W I W +P+ D + SLEMV +DE KI AS+ K +F + K EG VY
Sbjct: 17 GWKIKVRVLRLWEVPSFLKPDQTNSLEMVLIDEMGTKIHASVRKQLFYVFQSKLSEGKVY 76
Query: 79 EIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPSD 138
E+ F+V P+ GSYR H Y+I+F TKV E SIP LG+SL + D
Sbjct: 77 EMSCFSVAPSVGSYRTTLHPYKIVFQMTTKVQACEGASIPSLGISLCKIADVCQHTSDHD 136
Query: 139 HLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLSSHSK 198
+LVDV+GF+T +S R V+ K+++ E+ D +G + G V ++ +
Sbjct: 137 YLVDVLGFMTGISVEREYVRDGKVTKMVIFEITDASGKCECALFGQYVDTLNKLMGKSGG 196
Query: 199 EKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMNGHSREI 251
P+++VQ+AK+K F K L ++ + I +N E+A RK + S ++
Sbjct: 197 GMPIILVQFAKVKIFRDKASLQNVMNTTRILINPPIEQADQIRKSVTFGSMDV 249
>Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 |
20130731
Length = 665
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 123/241 (51%), Gaps = 13/241 (5%)
Query: 9 HHQDLCPPKFN---WGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMF 65
H+ D P N W W +P S+EMV +D+ KI A++ K +
Sbjct: 6 HNLDDVVPGRNADAWRFVVRVIRLWEVPLFT------SIEMVLIDQNGVKIHATIPKQLM 59
Query: 66 RKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVP---LECESIPRLGL 122
+ K +EG VY++ F V+ G+YR +H Y+++F KTKV E IP GL
Sbjct: 60 YLFQHKLIEGKVYKLSNFTVLLNSGAYRTTHHTYKLIFQMKTKVEESHDYEISLIPNHGL 119
Query: 123 SLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVL 182
+L Q+ + ++LVDV+G +T +S R V+ KI+++EL D +G +
Sbjct: 120 TLTDISQITSRTQDYEYLVDVIGLMTGISAEREFVRDGKLTKILVIELTDHSGKCECTLF 179
Query: 183 GDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVST-IHLNQEFEEAKAFR 241
G+ V + +S + P++V+Q+AK+K F GK + ++ +T I+LN F EA F+
Sbjct: 180 GNYVDELHKLMSKAVEGSPVIVIQFAKVKIFRGKASIQNVVGSTTRIYLNPSFPEALKFK 239
Query: 242 K 242
+
Sbjct: 240 E 240
>Medtr1g075850.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:33615520-33612872 | 20130731
Length = 528
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 6/235 (2%)
Query: 17 KFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGN 76
K W I W +PA D + S+EM KI A + K + + K EG
Sbjct: 15 KDGWKIKVRVLRLWEVPAFLNPDQTNSVEM------GTKIHAGVRKQLLYVFQSKLSEGK 68
Query: 77 VYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADP 136
VY++ F+V P+ GSYR +H Y+I+F TKV E SIP G+SL + +
Sbjct: 69 VYQMSCFSVAPSVGSYRTTSHPYKIVFQMTTKVQVCEDASIPSFGISLCKIVDVCQHTSD 128
Query: 137 SDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLSSH 196
D+LVDV+GF+T +S R V+ K+++ E+ D +G + G V ++ +
Sbjct: 129 HDYLVDVLGFMTDISAEREYVRDGKVTKMVVFEITDASGKCECALFGQYVDTLNKLMGKS 188
Query: 197 SKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMNGHSREI 251
+ P+++VQ+AK+K F K L +I + I +N E+ RK + S ++
Sbjct: 189 AGGMPIILVQFAKVKIFRDKASLQNVINTTWILINLPIEQDDQVRKSVTFGSTDV 243
>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21416239-21412307 | 20130731
Length = 549
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 111/240 (46%)
Query: 5 PIRDHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAM 64
P D D+ P K NW I W + + + SLEMV MD + +I AS+ + +
Sbjct: 3 PKIDLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRRTL 62
Query: 65 FRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSL 124
K+ + E V+ I F+V GSYR A H Y+I F TK+ + + +P +
Sbjct: 63 IYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQCDDKFVPADIYVI 122
Query: 125 VTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGD 184
++ +D+L+DV+G L AV + + S K++ +EL + + G
Sbjct: 123 GDSREIFQSEYDTDYLIDVMGMLKAVGVEKSYTRNGSQSKMIPIELDYDGFRFKVTLFGP 182
Query: 185 CVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRM 244
V ++ +L+S E +V V KIK F+G+ + I + + N F A +KRM
Sbjct: 183 YVDELNAFLASGETENVVVAVLLTKIKIFQGQATIQNTINATKVLFNPTFTAALLLKKRM 242
>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830642-11833873 | 20130731
Length = 560
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 4/244 (1%)
Query: 1 MKFRPIRDHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASL 60
+ F PI + K W I W + N N S+EMV MD + +I AS+
Sbjct: 3 LTFEPI----SQISSSKPAWNIKARVVRLWKVSDFNRNTLPFSIEMVLMDSEGSRIHASI 58
Query: 61 GKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRL 120
K + K+ + EG VY V GSY+ ++ Y++ F TK +PL +
Sbjct: 59 KKTLLYKFQSEIREGKVYSFENMGVAANGGSYKTTHYPYKLNFQFGTKCLPLCGALVSGS 118
Query: 121 GLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFV 180
V + + D+LVDV+G LT V R + S K+ ++ + + +
Sbjct: 119 DFKFVPISDIVGGSYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGYKLQCT 178
Query: 181 VLGDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAF 240
+ G V ++ +L++ +V +Q AK+K F+ + + + + N E AF
Sbjct: 179 LFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIHIQNCLNCTRLKFNPVCVEGTAF 238
Query: 241 RKRM 244
+ RM
Sbjct: 239 KNRM 242
>Medtr2g054710.1 | animal RPA1 domain protein | LC |
chr2:23363838-23365033 | 20130731
Length = 271
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 12/240 (5%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++C K W + W + N N S+EMV +DE +I ASL K + K+ +
Sbjct: 12 EICTEKTFWNLKGKIIRLWQVSDFNGNMMPFSIEMVILDEAGDRIHASLKKTLIYKFRND 71
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG + V G YR H Y++ F +KV L +I + +P QL
Sbjct: 72 LFEGKCFSFENMGVTNNGGGYRTTKHTYKLNFQFSSKVKYLPALTITK------SPYQLV 125
Query: 132 TIAD------PSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDC 185
I++ +D+LVD++G LT V R + + K+ ++EL + G
Sbjct: 126 PISEFIGGTYDTDYLVDIIGVLTGVGSERERERNGNMTKLNVIELEAGGFKIQCTFFGSY 185
Query: 186 VSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMN 245
V ++ +++S + +V++Q AK K F+ K + I + + + A + R R++
Sbjct: 186 VDDLNSFIASGDIQNAMVIIQLAKAKSFQDKIHIQNCIGCTKVIFKPICDAAVSMRNRLS 245
>Medtr8g479260.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:33777150-33779789 | 20130731
Length = 555
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 12/240 (5%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++C K W + W + N N S+EMV +DE +I ASL K + K+ +
Sbjct: 12 EICTEKTFWNLKGKIIRLWQVSDFNGNRMPFSIEMVILDEAGDRIHASLKKTLIYKFRND 71
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG + V G YR H Y++ F +KV L +I + +P QL
Sbjct: 72 LFEGKCFSFENMGVANNGGGYRTTKHTYKLNFQLSSKVKYLPALTITK------SPYQLV 125
Query: 132 TIAD------PSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDC 185
I++ +D+LVD++G LT V R + + K+ ++EL + + G
Sbjct: 126 PISEVIGGTYDTDYLVDIIGVLTGVGSERELERNGNMTKLNVIELEAGGFKIQCTLFGSY 185
Query: 186 VSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMN 245
V ++ +++S +V++Q AK K F+ K + I + + + A + R R++
Sbjct: 186 VDDLNSFIASGDIPNAIVIIQLAKAKSFQDKIHVQNCIGCTKVIFKPTCDAAVSMRNRLS 245
>Medtr2g008650.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:1569207-1566568 | 20130731
Length = 555
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 12/240 (5%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++C K W + W + N N S+EMV +DE +I ASL K + K+ +
Sbjct: 12 EICTEKTFWNLKGKIIRLWQVSDFNGNRMPFSIEMVILDEAGDRIHASLKKTLIYKFRND 71
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG + V G YR H Y++ F +KV L +I + +P QL
Sbjct: 72 LFEGKCFSFENMGVANNGGGYRTTKHTYKLNFQFSSKVKYLPALTITK------SPYQLV 125
Query: 132 TIAD------PSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDC 185
I++ +D+LVD++G LT V R + + K+ ++EL + + G
Sbjct: 126 PISEVIGGTYDTDYLVDIIGVLTGVGSERELERNGNMTKLNVIELEAGGFKIQCTLFGSY 185
Query: 186 VSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMN 245
V ++ +++S +V++Q AK K F+ K + I + + + A + R R++
Sbjct: 186 VDDLNSFIASGDIPNAIVIIQLAKAKSFQDKIHVQNCIGCTKVIFKPTCDAAVSMRNRLS 245
>Medtr8g059025.1 | animal RPA1 domain protein | LC |
chr8:20549873-20550376 | 20130731
Length = 138
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 8 DHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRK 67
D ++ P + W I W +P L D + SLEMV +D++ KI AS+ K +
Sbjct: 6 DSLSEIVPDRDGWRIKVRILRLWEVPTLLRPDQTNSLEMVLIDDKGAKIHASVRKQLLYV 65
Query: 68 WADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTP 127
+ K EG VY++ FF+V P+ GSYR H Y+++F KTKV E IP G+S
Sbjct: 66 FQPKLSEGKVYKMSFFSVAPSVGSYRTTLHPYKLVFQMKTKVQVSESVLIPTYGVS---- 121
Query: 128 LQLETIADPSDHLVD 142
L IAD H V+
Sbjct: 122 --LSKIADVCGHDVE 134
>Medtr6g039240.1 | animal RPA1 domain protein | LC |
chr6:14180761-14182238 | 20130731
Length = 289
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S+E+V MD + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSF--VVLGDCVSVV 189
+ +++LVDV+G + V R Y+ +G+ F + G+ V +
Sbjct: 130 NESYDNNYLVDVIGVMIGVGVER---------------EYERDGTYRFKCTLFGEYVEEL 174
Query: 190 SDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRK 242
+ +LSS + +V + K+K F+GK L + I N E E K RK
Sbjct: 175 NSFLSSGESQNAVVAIMLTKVKLFQGKPALQNAFSSTRITFNPEIGETKELRK 227
>Medtr1g094230.1 | animal RPA1 domain protein | LC |
chr1:42436471-42437983 | 20130731
Length = 303
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 103/233 (44%), Gaps = 17/233 (7%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S+E+V MD + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSF--VVLGDCVSVV 189
+ +++LVDV+G + V R Y+ +G+ F + G+ V +
Sbjct: 130 NESYDNNYLVDVIGVMIGVGVER---------------EYERDGTYRFKCTLFGEYVEEL 174
Query: 190 SDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRK 242
+ +LSS + +V + K+K F+GK L + I N E E K RK
Sbjct: 175 NSFLSSGESQNAVVAIMLTKVKLFQGKPALRNAFSYTRITFNPEMGETKEIRK 227
>Medtr8g062060.1 | DUF223 domain protein | LC |
chr8:25911934-25914219 | 20130731
Length = 530
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 118/272 (43%), Gaps = 11/272 (4%)
Query: 15 PPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVE 74
P K N I W + + + S E++ MD + ++ A++ K+ VE
Sbjct: 13 PDKTNCSIMVRVLRLWDVESTLMPGRVNSSELLLMDIEGYRMHATVPPFCVEKFRHMLVE 72
Query: 75 GNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIA 134
VY I F+V+P + + + AYRI+F T ++ C +IP LSL+T L
Sbjct: 73 NRVYIITMFSVLPNLDEFMSTSSAYRIVFHQDTDLMATTCSAIPECRLSLITSADLLKKT 132
Query: 135 DPSDHLVDVVGFLTAVSPVRIDVKGSSHV-KIMMMELYDENGSMSFVVLGDCVSVVSDYL 193
+ VDV+G LTA+ + ++H+ ++ EL DE + G + + + L
Sbjct: 133 RGCSYAVDVIGLLTAMHHEYF-LDSTNHLSSVLKFELTDERTKFECALTGKYIGIFHELL 191
Query: 194 SSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMNGHSREIEG 253
P+VV+Q+A++ G ++ ++ + N E F+ R+ I G
Sbjct: 192 KKVQLRLPIVVIQFARVIAENGTPVVCAEKDITKVSFNPTIPEVTQFQDRL-----LIAG 246
Query: 254 HVGDIDFFDFAYPMIDDVKI----VYPSVDLK 281
I F+ + M DV + +YP +K
Sbjct: 247 PKSSIVKFNPNFRMSVDVSLSFSKMYPKKSIK 278
>Medtr8g463820.1 | animal RPA1 domain protein | LC |
chr8:22514633-22516142 | 20130731
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 17/237 (7%)
Query: 8 DHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRK 67
D ++ P K +W + W S+E+V MD + +I AS+ + + K
Sbjct: 6 DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65
Query: 68 WADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTP 127
+ ++ EG V+ I F+V GSYR + + Y++ F+ TKV + +P S
Sbjct: 66 FKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPA 125
Query: 128 LQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSF--VVLGDC 185
+ + +++LVDV+G + V R Y+ +G+ F + G+
Sbjct: 126 PDVFNESYDNNYLVDVIGVMIGVGVER---------------EYERDGTYRFKCTLFGEY 170
Query: 186 VSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRK 242
V ++ +LSS + +V + K+K F+GK L + I N E E K RK
Sbjct: 171 VEELNSFLSSGESQNAVVAIMLTKVKLFQGKPALQNAFSSTRITFNPEIGETKELRK 227
>Medtr3g056240.1 | DUF223 domain protein | HC |
chr3:22396065-22393475 | 20130731
Length = 323
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%)
Query: 30 WILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAK 89
W L N N S+EMV MD + +I AS+ K ++ K+ + EG VY V
Sbjct: 28 WKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLWYKFQSEIREGKVYSFENMGVAANG 87
Query: 90 GSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTA 149
GSY+ +H Y++ F TK +PL + V + + D+LVDV+G LT
Sbjct: 88 GSYKTTHHPYKLNFQFGTKCLPLCGALVSGSDFKFVPISDIVGGSYDCDYLVDVIGMLTG 147
Query: 150 VSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAK 209
V R + S K+ ++ + + + + G V ++ +L++ +V +Q AK
Sbjct: 148 VGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAK 207
Query: 210 IKKF 213
+K+F
Sbjct: 208 VKRF 211
>Medtr6g051890.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:18071124-18068908 | 20130731
Length = 399
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 4/142 (2%)
Query: 20 WGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYE 79
W I W + D S+EMV +D++ GKI ++ K + + V+G VY+
Sbjct: 22 WRIEMRTARLWTIHTFVKPDQINSVEMVLIDDKGGKIHVTVRKQLLYLFQHLLVKGKVYK 81
Query: 80 IFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECES--IPRLGLSLVTPLQLETIADPS 137
I +F+V P+ GSYR+ H ++I+F TKV LECE+ I GL+ ++ + D
Sbjct: 82 IAYFSVAPSVGSYRSTLHPHKIVFQMNTKV--LECENSLISPCGLTFSNISKICSHTDEY 139
Query: 138 DHLVDVVGFLTAVSPVRIDVKG 159
D+L DV+G +T +S RI V G
Sbjct: 140 DYLFDVMGVMTDISVERIFVHG 161
>Medtr3g056270.1 | replication factor-A carboxy-terminal domain
protein | HC | chr3:22409504-22413525 | 20130731
Length = 719
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%)
Query: 30 WILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAK 89
W L N N S+EMV MD + +I AS+ K ++ K+ + EG VY V
Sbjct: 28 WKLSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTLWYKFQSEIREGKVYSFENMGVAANG 87
Query: 90 GSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTA 149
GSY+ +H Y++ F TK +PL + V + + D+LVDV+G LT
Sbjct: 88 GSYKTTHHPYKLNFQFGTKCLPLFGALVSGSDFKFVPISDIVGGSYDCDYLVDVIGMLTG 147
Query: 150 VSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAK 209
V R + S K+ ++ + + + + G V ++ +L++ +V +Q AK
Sbjct: 148 VGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYVDKLNTFLATGETANVVVSIQLAK 207
Query: 210 IK 211
+K
Sbjct: 208 VK 209
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%)
Query: 40 ASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAY 99
A++ + + + KI AS+ K ++ K+ + EG VY V GSY+ +H Y
Sbjct: 197 ANVVVSIQLAKVKGSKIHASIKKTLWYKFQSEIREGKVYSFENMGVAANGGSYKTTHHPY 256
Query: 100 RILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKG 159
++ TK +PL + V + + D+LVDV+G LT V R +
Sbjct: 257 KLNVQFGTKCLPLCGALVSGSDFKFVPIFDIVGGSYDCDYLVDVIGMLTGVGTEREYERN 316
Query: 160 SSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLL 219
S K+ ++ + + + + G V ++ +L++ +V +Q AK+K F+ +
Sbjct: 317 GSATKLNVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIHI 376
Query: 220 HTLIPVSTIHLNQEFEEAKAFRKRM 244
+ + + N E AF+ RM
Sbjct: 377 QNCLNCTRLKFNPVCAEGTAFKNRM 401
>Medtr8g088810.1 | DUF223 domain protein | LC |
chr8:36895897-36893498 | 20130731
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 116/255 (45%), Gaps = 25/255 (9%)
Query: 8 DHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRK 67
D ++ P K +W + W S+E V +D + +I AS+ + + K
Sbjct: 6 DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLIDRKGDQIGASIRRTLIYK 65
Query: 68 WADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTP 127
+ ++ EG V+ I F+V GSYR +++ Y++ F+ TKV +L +++ P
Sbjct: 66 FKEQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKV---------KLSKTILVP 116
Query: 128 LQLETIADPSD---------HLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENG-SM 177
+ + + D +LVDV+G + V R + + K+ ++EL D NG
Sbjct: 117 INVYSFTPAPDVFNESYDNNYLVDVIGVIIGVGVEREYEREGTKTKMNVIEL-DSNGYRF 175
Query: 178 SFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEA 237
+ G+ V ++ LSS + +V + K+K F+GK L + + I N E E
Sbjct: 176 KCTLFGEYVEELNSLLSSDESQNVVVAIMLTKVKLFQGKPALQNALSSTRITFNPEIGET 235
Query: 238 KAFRKRMNGHSREIE 252
K RKR REI+
Sbjct: 236 KELRKR-----REID 245
>Medtr3g037500.1 | transmembrane protein, putative | LC |
chr3:13783344-13781841 | 20130731
Length = 290
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 75/163 (46%)
Query: 52 QEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVP 111
Q KIQA L E VY + F ++P GS R +H Y+I T VVP
Sbjct: 2 QGNKIQAYLPTLCMECLGRVVHENCVYVVPNFCLVPNVGSTRVTSHRYKIKILITTTVVP 61
Query: 112 LECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELY 171
+ +I R G+SL++ ++ HL+DV+G LT++ + S ++ +EL
Sbjct: 62 CDIYTIQRYGVSLMSSAEINERRHGCAHLIDVMGLLTSLHYDYVVDVAESLATVVRLELT 121
Query: 172 DENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFE 214
DE G + G V V D LS P V+QY KI + E
Sbjct: 122 DERGKFECALYGPYVGVFKDLLSGVGSVLPFAVLQYVKICREE 164
>Medtr3g044760.1 | DUF223 domain protein | LC |
chr3:14435139-14437639 | 20130731
Length = 444
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Query: 15 PPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVE 74
PP+ W I W + + + I +EMV +D+ +IQA++ ++ + F E
Sbjct: 13 PPRMAWNIRVRVVRLWRIMSSLVRGRVIFMEMVLLDQDGNRIQATIPPDCVDRFQNTFHE 72
Query: 75 GNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIA 134
VY F V+P S R +H +R+ +T VV + I R G S + Q+
Sbjct: 73 NRVYMFSNFKVLPNDRSTRVTSHNHRLKLWEETVVVNHDGYIIQRFGFSFFSSAQILEHQ 132
Query: 135 DPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLS 194
HL+DV G LT+ + D + + + G++ V+ G + LS
Sbjct: 133 HGCGHLIDVFGLLTS---LHYDFVVDARQNLATI----ARGTIECVLYGRFIGFFKGLLS 185
Query: 195 SHSKEKPLVVVQYAKIKK 212
P+VV+Q+AKI K
Sbjct: 186 RFGSALPVVVIQFAKICK 203
>Medtr8g467450.1 | animal RPA1 domain protein | LC |
chr8:24241111-24240561 | 20130731
Length = 142
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 13 LCPPKFNWGIXXXXXXXWILPA-LNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
+ P + W W +PA LNL+ + SLEMV +DE+ KI A++ K + + K
Sbjct: 11 VVPWREGWRFKVKILRMWEVPAFLNLDQPN-SLEMVLIDEKGDKIHATVRKQLLYVFQKK 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
E + Y++F+F++ P G Y ++++F KTKV +E +IP GLS +
Sbjct: 70 LAEEDAYKMFYFSIAPNVGYYHTTTQEFKLIFQMKTKVQKIESSAIPDNGLS------VS 123
Query: 132 TIADPSDHLVD 142
I D S H VD
Sbjct: 124 KIEDLSKHTVD 134
>Medtr6g069230.1 | animal RPA1 domain protein | LC |
chr6:24915605-24909459 | 20130731
Length = 356
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 2/227 (0%)
Query: 17 KFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGN 76
+ NW + W + + + SLE++ +D + KIQAS+ + E
Sbjct: 111 RMNWSVKVRLLRMWNVESSIVAGKVNSLELILLDREGNKIQASVPLQCIEVFNHILEENR 170
Query: 77 VYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADP 136
Y F+V+ ++++R++F T+V+ + +I + GLS+ +
Sbjct: 171 GYVFSDFHVVSNIADMMTTHNSHRLIFHSNTEVIFTDIPAIDKFGLSIHGSEAISKHVFG 230
Query: 137 SDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLSSH 196
+LVDV+GFLT V P +D ++ EL N + G V
Sbjct: 231 YSYLVDVIGFLTDVHPEYVDDPFGRLSTVLRFEL--TNLRFQCALYGKVVRSFQLMFDKV 288
Query: 197 SKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKR 243
S+ P+VV+Q A+I + G ++ ++ ++ + +N +FEEA R R
Sbjct: 289 SEGLPVVVLQLARIVRDGGSIIVQSVKNITRVFVNPDFEEASRSRMR 335
>Medtr2g062200.1 | DUF223 domain protein | LC |
chr2:26248587-26247742 | 20130731
Length = 185
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 80/170 (47%)
Query: 46 MVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSG 105
MV MD KI A++ + + K+ EG VY + F V GSYR H Y++ F
Sbjct: 1 MVLMDASGNKIHATVRRTLIYKFEKDLQEGKVYSMSGFGVAANLGSYRTTKHEYKLNFQF 60
Query: 106 KTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKI 165
TKV S+P + + + +D+LVDV+G LT V R + + K+
Sbjct: 61 NTKVKLCGKNSVPDDIYPISNSIVVFNSEYDTDYLVDVMGMLTGVGMQREYERNGAKTKM 120
Query: 166 MMMELYDENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEG 215
+ M+L + + G ++ ++++ K +VVV AK+K ++G
Sbjct: 121 VAMKLNYDGFKFKVTLFGQYADELNAFVAAGETNKVIVVVLLAKVKIWQG 170
>Medtr2g048550.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21410361-21406613 | 20130731
Length = 495
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%)
Query: 30 WILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAK 89
W + +D S S+EMV MD KI AS+ +++ K+ D E N+Y + V
Sbjct: 28 WFDAEVIQDDTSQSMEMVLMDSYGEKIHASVHSSLYWKFHDLIKENNIYIVSNVKVDRNV 87
Query: 90 GSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTA 149
G R H Y +LF T+V + P A D L DV+G LT
Sbjct: 88 GIMRTTPHPYVLLFQMNTRVKKAYFADVGPEFYRFNDPQMYFDTAYDRDCLGDVIGMLTD 147
Query: 150 VSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAK 209
V +ID +G++ K+ ++E+ E + + G V ++++++ +V V +AK
Sbjct: 148 VRVKKIDAEGAACDKLAIIEMNHEGCFIQCSLFGTFVDQLNNFVAKGDISNVIVAVLFAK 207
Query: 210 IKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRM 244
++ L+ + + S + N F A + M
Sbjct: 208 VEYVIAGKLVISTVTGSKLVFNPLFTTAIDLKGSM 242
>Medtr7g089660.1 | animal RPA1 domain protein | LC |
chr7:35114160-35121568 | 20130731
Length = 236
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S+E+V +D + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQNYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKNQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPNVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSF--VVLGDCVSVV 189
+ +++LVDV+G + V + + Y+ +G+ F + G+ V +
Sbjct: 130 NESYDNNYLVDVIGVMIGVG---------------VEKEYERDGTYRFKCTLFGEYVEEL 174
Query: 190 SDYLSSHSKEKPLVVVQYAKIKKFEG 215
+ +LSS + +V + K+K F+
Sbjct: 175 NSFLSSGESQNVVVAIMLTKVKLFQA 200
>Medtr8g036090.1 | animal RPA1 domain protein | HC |
chr8:13279086-13278300 | 20130731
Length = 172
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S+E+V MD + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENG 175
+ +++LVDV+G + V R + K+ ++EL D NG
Sbjct: 130 NESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL-DSNG 172
>Medtr4g471610.1 | animal RPA1 domain protein | HC |
chr4:27071837-27072623 | 20130731
Length = 172
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S+E+V MD + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENG 175
+ +++LVDV+G + V R + K+ ++EL D NG
Sbjct: 130 NESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL-DSNG 172
>Medtr3g078440.1 | animal RPA1 domain protein | HC |
chr3:35350146-35349360 | 20130731
Length = 172
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S+E+V MD + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYKFKEQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENG 175
+ +++LVDV+G + V R + K+ ++EL D NG
Sbjct: 130 NESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL-DSNG 172
>Medtr1g052715.1 | DUF223 domain protein | LC |
chr1:21677037-21675057 | 20130731
Length = 334
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 4/211 (1%)
Query: 44 LEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILF 103
+ M+ +D Q I AS+ K + ++ D+F +G++Y I V +++ H Y++
Sbjct: 1 MHMILLDNQGVTIHASVRKHLLPQFKDQFEKGSIYVIEKLMVAQNDPTFKTTPHKYKLNL 60
Query: 104 SGKTKVVPL-ECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSH 162
G T + L + IP+ +T + + D L+DV+G + +++ K
Sbjct: 61 MGGTTIFKLKDSNEIPKRHFQFMTFVDIMN-CHKEDRLIDVIGHVVEKDELKVTEKNGKT 119
Query: 163 VKIMMMELYDENGSMSFVVL-GDCVSVVSDYLSSHSKEKPLVV-VQYAKIKKFEGKNLLH 220
K+M L D +G+ L D + +L SH P V+ +Q K+KK+ G +
Sbjct: 120 NKVMDATLEDLDGNRIHCTLWDDYAEQLKRFLESHDPNLPAVILIQMCKLKKYFGAMGIS 179
Query: 221 TLIPVSTIHLNQEFEEAKAFRKRMNGHSREI 251
+ + + E E ++ +RMN + E+
Sbjct: 180 NAFYGTKLLFDVELPEVASYLERMNEANVEL 210
>Medtr7g110100.1 | replication factor-A carboxy-terminal domain
protein | HC | chr7:45127464-45130150 | 20130731
Length = 526
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 3/244 (1%)
Query: 17 KFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGN 76
K N + W +P + + ++ MDE+ GKIQA+ K + K +G
Sbjct: 15 KINIKLRVRVINLWTVPDFSRPTEDNFIHLLLMDEKLGKIQATAKKTLIPKIRSLVQDGA 74
Query: 77 VYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADP 136
YEI V + YR H +++ +TK ++C +IP V P + +
Sbjct: 75 AYEIQNVLVAHNEIRYRCTGHRWKLNLIDQTKFTKIDCNTIPEYHFEFV-PFKEILESTK 133
Query: 137 SDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSD-YLSS 195
D VDV+G + ++ ++ + L D G+ L D ++ D YL+
Sbjct: 134 EDRHVDVIGRVVERDSLKEKEVLGKKSMVLDITLEDTEGNRIHCSLWDTYAIRMDAYLTV 193
Query: 196 HSKEKP-LVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMNGHSREIEGH 254
H P +VV+ K+KK+ + + + L+ + K F +++G E+
Sbjct: 194 HDPNSPVIVVIHLCKLKKYYATMGISNAFYGTKLILDDDHPVVKEFLSKIDGADVEVTQG 253
Query: 255 VGDI 258
V I
Sbjct: 254 VSQI 257
>Medtr8g096680.1 | animal RPA1 domain protein | HC |
chr8:40558216-40559002 | 20130731
Length = 172
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 8 DHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRK 67
D ++ P K +W + W S+E+V MD + +I AS+ + + K
Sbjct: 6 DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65
Query: 68 WADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTP 127
+ ++ EG V+ I F+V GSYR + + Y++ F+ TKV + +P S
Sbjct: 66 FKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPA 125
Query: 128 LQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENG 175
+ + +++LVDV+G + V R + K+ ++EL D NG
Sbjct: 126 PDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL-DSNG 172
>Medtr1g036740.1 | animal RPA1 domain protein | HC |
chr1:13497342-13498128 | 20130731
Length = 172
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 78/168 (46%), Gaps = 1/168 (0%)
Query: 8 DHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRK 67
D ++ P K +W + W S+E+V MD + +I AS+ + + K
Sbjct: 6 DFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65
Query: 68 WADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTP 127
+ ++ EG V+ I F+V GSYR + + Y++ F+ TKV + +P S
Sbjct: 66 FKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPA 125
Query: 128 LQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENG 175
+ + +++LVDV+G + V R + K+ ++EL D NG
Sbjct: 126 PDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL-DSNG 172
>Medtr4g028320.1 | animal RPA1 domain protein | LC |
chr4:9767872-9767142 | 20130731
Length = 153
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
Query: 30 WILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAK 89
W + S S+E+V MD + +I AS+ + + K ++ EG V+ I F+V
Sbjct: 9 WFVQDYKNKKLSFSMELVLMDRKGDRIGASIRRTLIYKSKEQLQEGMVFTISSFDVASNS 68
Query: 90 GSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTA 149
GSYR + + Y++ F+ TKV + +P S + + + ++ LVDV+G +T
Sbjct: 69 GSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTSAYDVFNESYDNNFLVDVIGVMTG 128
Query: 150 VSPVRIDVKGSSHVKIMMMELYDENG 175
V R + K+ ++EL D NG
Sbjct: 129 VGVEREYERDGVKTKMNVIEL-DSNG 153
>Medtr3g452170.1 | DUF223 domain protein | HC |
chr3:18995882-18993791 | 20130731
Length = 453
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 100/244 (40%), Gaps = 3/244 (1%)
Query: 17 KFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGN 76
K N + W +P + + ++ +DE+ GKIQA+ K + K +G
Sbjct: 15 KINIKLHVRVINLWTVPDFSRPTEDNFIHLLLIDEKLGKIQATAKKTLIPKIRSLVQDGE 74
Query: 77 VYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADP 136
YEI V + YR H +++ +TK ++C +IP V P + +
Sbjct: 75 AYEIQNVLVAHNEIRYRCTGHRWKLNMIDQTKFTKIDCNTIPVYHFEFV-PFKEILESTK 133
Query: 137 SDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSD-YLSS 195
D VDV+G + ++ ++ + L D G+ L D ++ D YL+
Sbjct: 134 EDRHVDVIGRVVERDSLKEKEVLGKKSMVLDITLEDSEGNRIHCSLWDTYAIRMDAYLTV 193
Query: 196 HSKEKP-LVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMNGHSREIEGH 254
H P +VV+ K+KK+ + + + L+ + K F +++G E+
Sbjct: 194 HDPNSPVIVVIHLCKLKKYYSTMGISNAFYGTKLILDDDHPVVKEFLSKIDGADVEVTQG 253
Query: 255 VGDI 258
V I
Sbjct: 254 VSQI 257
>Medtr1g105785.1 | replication factor-A carboxy-terminal domain
protein | HC | chr1:47732917-47735741 | 20130731
Length = 566
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Query: 17 KFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGN 76
K N + W + N + S+ M+ +D++ GKIQAS K + + EG+
Sbjct: 15 KINIKLRVRVVHVWTVSEFNNPNEDNSIHMLLLDDKLGKIQASAKKHLVPRIRSNVEEGS 74
Query: 77 VYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADP 136
Y+I V Y+ H +++ TK ++ +IP + P A+
Sbjct: 75 TYDIENVLVTKNDPKYQVTQHRFKLNLIDNTKFFKIDAATIPLNHFDFM-PFNEILEAER 133
Query: 137 SDHLVDVVGFLTAVSPVR-IDVKGSSHVKIMMMELYD-ENGSMSFVVLGDCVSVVSDYLS 194
+ +VDV+G + ++ DV G KIM + L D E+ + + + ++ +L+
Sbjct: 134 EEKVVDVIGQVVERDELKERDVNG-RRSKIMDLTLQDSESRRVHCTLWANYAERMNSFLA 192
Query: 195 SHSKEKPLVV-VQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRMNG 246
+H P++V +Q K+KK++G + + + L + EA F+ +++G
Sbjct: 193 AHDPSSPVIVLIQQCKLKKYQGIMGVSNAFFGTKLLLEGDLPEAIEFKSKIDG 245
>Medtr3g116750.1 | animal RPA1 domain protein | HC |
chr3:54610965-54611750 | 20130731
Length = 172
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S+E+V +D + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVARAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKNQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENG 175
+ +++LVDV+G + V + + K+ ++EL D NG
Sbjct: 130 NESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL-DSNG 172
>Medtr3g095950.1 | animal RPA1 domain protein | HC |
chr3:43845609-43846394 | 20130731
Length = 172
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 1/164 (0%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S+E+V +D + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKNQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENG 175
+ +++LVDV+G + V + + K+ ++EL D NG
Sbjct: 130 NESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL-DSNG 172
>Medtr6g465570.1 | animal RPA1 domain protein | LC |
chr6:23330063-23328693 | 20130731
Length = 172
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 30 WILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAK 89
W +P SL M+ +DE+ GKI AS+ K + + D+ EG+ Y I F V
Sbjct: 24 WSVPDRTNPVVDGSLHMLLLDEKCGKIHASVRKNLIHLFKDQIDEGSAYVIESFMVGSND 83
Query: 90 GSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTA 149
+Y+ H Y++ F G T V + +IP + + +Q+ + A D L+DV+G +
Sbjct: 84 HAYKTTGHKYKLNFMGGTNVFRVSSVNIPAHHFTFMPFMQIVS-ATREDKLLDVIGHVVE 142
Query: 150 VSPVRIDVKGSSHVKIM--MMELYDENGSM 177
++ K K++ M+E + GS+
Sbjct: 143 KDVIKETEKNGKKRKVLDIMLEDLESYGSI 172
>Medtr4g046077.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:16158485-16160769 | 20130731
Length = 405
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 107 TKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIM 166
TKV E +IP+ G+SL + + D+LVDVVG +T +S R ++ K++
Sbjct: 3 TKVQVSESFTIPKYGVSLTKLVDVCAHTYDYDYLVDVVGLMTGISNEREYIRDGKVTKMV 62
Query: 167 MMELYDENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNL 218
+ +L D++GS + G V ++ + P+V+VQ+AK+K F+G +L
Sbjct: 63 VFQLTDDSGSCECALFGKYVDALNKLMRKAVDGMPVVLVQFAKVKIFKGISL 114
>Medtr7g093810.1 | animal RPA1 domain protein | HC |
chr7:37315424-37314639 | 20130731
Length = 172
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S+E+V +D + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFKNQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
E V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQERMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENG 175
+ +++LVDV+G + V + + K+ ++EL D NG
Sbjct: 130 NESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL-DSNG 172
>Medtr5g085220.1 | animal RPA1 domain protein | LC |
chr5:36789021-36788235 | 20130731
Length = 172
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 74/159 (46%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W S S+++V +D + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVPAWFGKDYKNKKLSFSMDLVLIDRKGDRIGASIRRILIYKFKEQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I F V GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFIVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTPAPDVF 129
Query: 132 TIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMEL 170
+ ++ LVDV+G + V R + S K+ ++EL
Sbjct: 130 NESYDNNCLVDVIGVMIGVGVEREYERDSVKTKMNVIEL 168
>Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268124
| 20130731
Length = 272
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 48/240 (20%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W + + + M D+ I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVKVVRAWF--GQDYKNKKLPFSMELGDQ----IGASIRRTLIYKFKNQ 63
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV YR + Y++ F+ TKV +L ++++ P +
Sbjct: 64 LQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKV---------KLSITVLVPTNVY 114
Query: 132 TIADPSD---------HLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYDENGSMSFVVL 182
+ D +LVDV+G + V R Y+ +
Sbjct: 115 SFTPAPDVFNEFYDNNYLVDVIGVMIGVGVER---------------EYERD-------- 151
Query: 183 GDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRK 242
+ V ++ +LSS + +V + K+K F+GK L + I N E E K RK
Sbjct: 152 -EYVEELNSFLSSGESQNAVVAIMLTKVKLFQGKPALQNAFSSTRITFNPEIGETKELRK 210
>Medtr8g469510.1 | PIF1 DNA helicase/replication A1-like protein,
putative | LC | chr8:25279627-25279236 | 20130731
Length = 93
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%)
Query: 30 WILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAK 89
W P +D + SLEMV +DE+ KI A++ K + K +EG +Y++ FF+V +
Sbjct: 11 WEAPTFLKHDQTNSLEMVLVDEKGCKIHATIQKQLLYLIQAKLIEGKIYKMSFFSVAHSS 70
Query: 90 GSYRAANHAYRILF 103
GSY H Y+ +F
Sbjct: 71 GSYCTTLHLYKPVF 84
>Medtr5g055160.1 | animal RPA1 domain protein | LC |
chr5:22720640-22718177 | 20130731
Length = 270
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W +E+V M+ + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFFMELVLMNRKGDRIGASIRRTLIYKFKEQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLE 131
EG V+ I FNV GSYR + + Y++ F+ TKV + +P S +
Sbjct: 70 LQEGMVFTISSFNVASNNGSYRPSCNEYKLDFTINTKVKLSKTVLVPTNVYSFTPAPHVF 129
Query: 132 TIADPSDHLVDVVGFLTAV 150
+ +++LVDV+G + V
Sbjct: 130 NESYDNNYLVDVIGVMIGV 148
>Medtr4g036240.2 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 480
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%)
Query: 90 GSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTA 149
GSY+ ++ Y++ F TK +PL + V + + D+LVDV+G LT
Sbjct: 8 GSYKTTHYPYKLNFQFGTKCLPLCGALVSGSDFKFVPISDIVGGSYDCDYLVDVIGMLTG 67
Query: 150 VSPVRIDVKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQYAK 209
V R + S K+ ++ + + + + G V ++ +L++ +V +Q AK
Sbjct: 68 VGTEREYERNGSATKLNVIAMEADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAK 127
Query: 210 IKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRKRM 244
+K F+ + + + + N E AF+ RM
Sbjct: 128 VKVFQDNIHIQNCLNCTRLKFNPVCVEGTAFKNRM 162
>Medtr1788s0010.1 | animal RPA1 domain protein | LC |
scaffold1788:754-253 | 20130731
Length = 139
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 8 DHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRK 67
D + ++ P K +W + W S+E+V MD + +I AS+ + + K
Sbjct: 6 DFNSNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIYK 65
Query: 68 WADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKV 109
++ EG V+ I F+V GSYR + + Y++ F+ TKV
Sbjct: 66 SKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKV 107
>Medtr1g050500.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:19683996-19681538 | 20130731
Length = 543
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 82 FFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPS---D 138
FF+V+ +AA + +R++ +T V + GL TPL +A PS
Sbjct: 4 FFHVLCDTARLKAAYNDHRMVIHPQTVVRKTYDFLVHGNGL---TPLSSHILARPSLGVG 60
Query: 139 HLVDVVGFLTAVSPVRID--VKGSSHVKIMMMELYDENGSMSFVVLGDCVSVVSDYLSSH 196
HL+DV+G LTA+S ++ V+ VKI G V+ G V + + +++
Sbjct: 61 HLIDVIGLLTAISYHNVEDVVRVEICVKIC-------RGRFDCVLYGAYVGLFQEMVNNS 113
Query: 197 SKEKPLVVVQYAKIKKFEGKNLLHTLIPVSTIHLNQEFEEAKAFRK 242
S P+VV+Q+AKI + G L + V+ + LN EA FR
Sbjct: 114 SPGLPVVVLQFAKINRETGAFYLESFKDVTRLLLNPHIGEALQFRN 159
>Medtr3g055660.1 | plant OB fold protein | LC |
chr3:21910372-21907746 | 20130731
Length = 548
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 44 LEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILF 103
LEMV D++ IQ ++ KW + E N Y + F V+ + +A+ H +R+
Sbjct: 67 LEMVIADKENDMIQLTVPYEELAKWKEILKENNTYTMLNFKVLKNDVAVKASTHPFRLAV 126
Query: 104 SGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHV 163
SG T + P++ +IP ++ +D L+DV+G ++ K + +
Sbjct: 127 SGATIIKPVDFPTIPLASFRFKDFGEILAGNYRNDLLIDVIGAFQDITNTN---KKGTII 183
Query: 164 KIMMMELYDENGSMSFVVLGD--CVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHT 221
+ + L D +G M L D + ++ E +V+++ + ++ +G ++
Sbjct: 184 RSVTFLLKDASGLMIHATLWDEFAKQFFDAFNQANGPETIFIVLKHVRAREAQG---IYP 240
Query: 222 LIPVST-----IHLNQEFEEAKAFRKR 243
L +T + +N E E F+ R
Sbjct: 241 LCVTNTWSGTKVIINAEIPEIAEFKTR 267
>Medtr4g014890.1 | DUF223 domain protein | LC | chr4:4267608-4264883
| 20130731
Length = 519
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 44 LEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILF 103
LEMV D++ IQ ++ KW + E N Y + F V+ + +A+ H +R+
Sbjct: 67 LEMVIADKENDMIQLTVPYEELAKWKEILKENNTYTMLNFKVLKNDVAVKASTHPFRLAV 126
Query: 104 SGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHV 163
SG T + P++ +IP ++ +D L+DV+G ++ K + +
Sbjct: 127 SGATIIKPVDFPAIPLASFRFKDFGEILAGNYRNDLLIDVIGAFQDITNTN---KKGTII 183
Query: 164 KIMMMELYDENGSMSFVVLGD--CVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHT 221
+ + L D +G M L D + ++ E +V+++ + ++ +G ++
Sbjct: 184 RSVTFLLKDASGLMIHATLWDEFAKQFFDAFNQANGPETIFIVLKHMRAREAQG---IYP 240
Query: 222 LIPVST-----IHLNQEFEEAKAFRKR 243
L +T + +N E E F+ R
Sbjct: 241 LCVTNTWSGTKVIINAEIPEIAEFKTR 267
>Medtr0032s0020.1 | PIF1-like helicase | LC |
scaffold0032:18195-20915 | 20130731
Length = 586
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 15 PPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVE 74
P K N I W + + + S E++ MD + ++ A++ K+ VE
Sbjct: 13 PDKTNCSIMVRVLRLWDVESTLMPGRVNSSELLLMDIEGYRMHATVPPFCVEKFRHMLVE 72
Query: 75 GNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIA 134
VY I F V+P + + + AY I+F T ++ C +IP+ LSL+T I
Sbjct: 73 NRVYIITMFFVLPNFDEFMSTSSAYHIVFHQDTDLMATTCSAIPKCRLSLIT----SAIP 128
Query: 135 DPSDHLVDVVGF 146
D ++ L V+ F
Sbjct: 129 DSTNRLSSVLKF 140
>Medtr4g109580.1 | replication protein A 70 kDa protein | HC |
chr4:45544168-45547694 | 20130731
Length = 618
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 48 FMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKT 107
DE +IQA++ RK+ DKF G VY I ++ A +++ + Y + + +
Sbjct: 213 LTDEDGTQIQATMFNDAARKFYDKFAMGKVYYISKGSLKVANKNFKTVVNDYEMTLNENS 272
Query: 108 KV--VPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKI 165
+V V E +P + V QL + S+ LVD+VG + VS + S++ +
Sbjct: 273 EVEEVANEAAFVPETKFNFVPIDQLGPYVNKSE-LVDLVGVVKNVSSTMSIRRKSNNETV 331
Query: 166 MMMELY--DENGSMSFVVL-GDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTL 222
++ DE V L GD + + L + + P+V ++ K+ F+G +L +
Sbjct: 332 PKRDITIADETKKTVVVSLWGDLATNIGQELLDMADKSPVVAIKSLKVGDFQGISL--SA 389
Query: 223 IPVSTIHLNQEFEEAKAFR 241
I S + +N E EA+ R
Sbjct: 390 ISRSLVLVNPEVPEAQKLR 408
>Medtr4g109580.2 | replication protein A 70 kDa protein | HC |
chr4:45544168-45547694 | 20130731
Length = 560
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 92/199 (46%), Gaps = 8/199 (4%)
Query: 48 FMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKT 107
DE +IQA++ RK+ DKF G VY I ++ A +++ + Y + + +
Sbjct: 213 LTDEDGTQIQATMFNDAARKFYDKFAMGKVYYISKGSLKVANKNFKTVVNDYEMTLNENS 272
Query: 108 KV--VPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKI 165
+V V E +P + V QL + S+ LVD+VG + VS + S++ +
Sbjct: 273 EVEEVANEAAFVPETKFNFVPIDQLGPYVNKSE-LVDLVGVVKNVSSTMSIRRKSNNETV 331
Query: 166 MM--MELYDENGSMSFVVL-GDCVSVVSDYLSSHSKEKPLVVVQYAKIKKFEGKNLLHTL 222
+ + DE V L GD + + L + + P+V ++ K+ F+G +L +
Sbjct: 332 PKRDITIADETKKTVVVSLWGDLATNIGQELLDMADKSPVVAIKSLKVGDFQGISL--SA 389
Query: 223 IPVSTIHLNQEFEEAKAFR 241
I S + +N E EA+ R
Sbjct: 390 ISRSLVLVNPEVPEAQKLR 408
>Medtr7g117425.1 | animal RPA1 domain protein | LC |
chr7:48554380-48555674 | 20130731
Length = 258
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 5 PIRDHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAM 64
P D+ ++ P K +W I W + +N + SL+M KI A++ + +
Sbjct: 3 PRSDNISEISPVKESWSIVVRIVCAWFVRDVNRDAHPFSLDM------GNKIHATVRRTL 56
Query: 65 FRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKV 109
K+ EG VY + F V GSYR H Y++ F TKV
Sbjct: 57 IYKFEKDLQEGKVYSMSCFGVAANLGSYRTTKHEYKLNFQFNTKV 101
>Medtr2g032570.1 | animal RPA1 domain protein | LC |
chr2:12255994-12255202 | 20130731
Length = 174
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 12 DLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADK 71
++ P K +W + W +E+V M+ + +I AS+ + + K+ ++
Sbjct: 10 NVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFFMELVLMNRKGDRIGASIRRTLIYKFKEQ 69
Query: 72 FVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKV 109
EG V+ I FNV GSYR + + Y++ F+ TKV
Sbjct: 70 LQEGMVFTISSFNVASNSGSYRPSCNEYKLDFTINTKV 107
>Medtr2g041270.1 | replication protein A 70 kDa protein | HC |
chr2:18105202-18100698 | 20130731
Length = 627
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
Query: 48 FMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRIL--FSG 105
+D G+I+ + A+ ++ + G VY I ++ PA+ ++ + + I+ +
Sbjct: 223 LLDSDGGEIRVTCFNAVVDRFYEAIEVGKVYLISKGSLKPAQKNFNHLKNEWEIMLDLNS 282
Query: 106 KTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSP-VRIDVKGSSHVK 164
++ P E SIPR S +E + + + ++DV+G +T+V+P V I K
Sbjct: 283 TIELCPDEDGSIPRQQFSFRPISDIEIVEN--NAILDVIGVVTSVNPSVPILRKNGMETL 340
Query: 165 IMMMELYDENG-SMSFVVLGDCVSVVSDYLSSHSKEK--PLVVVQYAKIKKFEGKNLLHT 221
++ L D +G S+ + G+ + L P++ V+ K+ +F GK++
Sbjct: 341 RRVLNLKDNSGKSVELTLWGEFCNREGQKLQEMVDAGVFPVLAVKAGKVNEFSGKSIGS- 399
Query: 222 LIPVSTIHLNQEFEEAKAFR 241
I + + +N +F EA+ R
Sbjct: 400 -ISTTQLFINPDFPEAQTLR 418
>Medtr7g096440.1 | PIF1-like helicase | LC | chr7:38691556-38693789
| 20130731
Length = 264
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 9/166 (5%)
Query: 55 KIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLEC 114
KIQAS+ F++ D EG Y I F V K ++ NH Y++ G T +
Sbjct: 6 KIQASIKSKDFKQLGDSIEEGASYTIEKFLVQFNKEKFKPTNHKYKLTLIGSTIITKTSY 65
Query: 115 ESIPRLGLSLVTPLQLETIADPSDH--LVDVVGFLTAVSPVR-IDVKGSSHVKIMMMEL- 170
+ IP +L + + I +D+ L+DV+G + ++ ++ + VKG KI+ +
Sbjct: 66 DKIPA---NLFNFTKFQHIIGGTDNGVLMDVIGHVVGMTDIKDVQVKG-KMTKILDLTFE 121
Query: 171 YDENGSMSFVVLGDCVSVVSDYLSSHSKEKPLVVVQY-AKIKKFEG 215
Y E+ ++ + G ++ Y+S++ +VVV + ++ F G
Sbjct: 122 YLESNTIICTLWGHFAEQMNSYMSTNGNTFSIVVVMHLCRLNVFGG 167
>Medtr7g051400.1 | replication factor-A carboxy-terminal domain
protein | LC | chr7:18001910-18004476 | 20130731
Length = 542
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 8/201 (3%)
Query: 17 KFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGN 76
K N + W + N + S+ M+ +D++ GKIQAS K + + EG+
Sbjct: 15 KINIKLRVRVIHVWTVSEFNNPNEDNSIHMLLLDDKFGKIQASAKKHLVSRIRSNVEEGS 74
Query: 77 VYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADP 136
Y+I V Y+ H +++ KTK ++ +IP + ++
Sbjct: 75 TYDIENVLVTKNDPKYQVTQHRFKLNLIDKTKFFKIDATTIPLNHFDFMPFNEILEAERE 134
Query: 137 SDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMELYD-ENGSMSFVVLGDCVSVVSDYLSS 195
+V L DV G KIM + L D E+ + + + ++ +L++
Sbjct: 135 EKVVVVERDELK-----EKDVNG-RRSKIMDLTLQDSESRRVHCTLWANYAERMNSFLAA 188
Query: 196 HSKEKPLVV-VQYAKIKKFEG 215
H P+VV +Q K+KK++G
Sbjct: 189 HDPSSPVVVLIQQCKLKKYQG 209
>Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944777
| 20130731
Length = 163
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 51 EQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVV 110
+Q +I AS+ + + K+ ++ EG V+ I FNV GSYR + + Y++ F+ TKV
Sbjct: 40 KQGDRIGASIRRTLIYKFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVK 99
Query: 111 PLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTAVSPVRIDVKGSSHVKIMMMEL 170
+ +P S + + +++LVDV+G + V + + K+ ++EL
Sbjct: 100 LSKTVLVPTNVYSFTPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL 159
Query: 171 YDENG 175
D NG
Sbjct: 160 -DSNG 163
>Medtr5g004860.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:159787-157165 | 20130731
Length = 540
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 21/251 (8%)
Query: 3 FRPIRDHHQDLCPPKFNWGIXXXXXXXWILPALNLNDASISLEMVFMDEQEGKIQASLGK 62
RP+ +D+ K W + W + + D +EMV +D + IQ +
Sbjct: 2 LRPVA-FLRDINEKKDFWKVAVKVTDKWSV----VKDGMEHMEMVIVDAKGTDIQVIIPT 56
Query: 63 AMFRKWADKFVEGN-VYEIFFFNVMPAKGSYRAANHAYRILFSGKTKVVPLECESIPRLG 121
A +R +K ++ N Y + F V P ++A+++ Y++ ++G T V IP
Sbjct: 57 A-YRAEYEKLIKVNSTYTLSNFQVFPNDLVFKASDNKYKLKWTGGTTAVDANVHDIPLPN 115
Query: 122 LSLVTPLQLETIADP--SDHLVDVVGFLTAVSPVRIDVKGSS---HVKIMMMELYDENGS 176
+ PL E IA +D LV V+G++ + ++ + G+ V +M +L D S
Sbjct: 116 MKF-KPLA-EIIAGKWRADLLVHVIGYVHEIGYCQV-MAGTGKKLQVNFLMKDLSD--IS 170
Query: 177 MSFVVLGDCVSVVSDYLSSHSKEKPLVV-VQYAKIKKFEGKNLLHTLIPVSTIHL--NQE 233
++ + D + + + + + P++V ++Y KIK+ EGK L S L N++
Sbjct: 171 LNCTLWEDYAAKFIKFNNENKETGPIIVMLKYGKIKE-EGKYPLSVTNTYSATKLLINED 229
Query: 234 FEEAKAFRKRM 244
E K FR+ +
Sbjct: 230 IAEIKRFRESL 240
>Medtr8g465040.1 | animal RPA1 domain protein | LC |
chr8:23105820-23106515 | 20130731
Length = 171
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 1/143 (0%)
Query: 30 WILPALNLNDASISLEMVFMDEQEGKIQASLGKAMFRKWADKFVEGNVYEIFFFNVMPAK 89
W + N + + M+ +D++ GKIQA K + K EG+ YEI V +
Sbjct: 28 WTVSEFNNPNEITGIHMLLLDDKMGKIQAFGKKILVPKIKSLVEEGSCYEIENVLVTRNE 87
Query: 90 GSYRAANHAYRILFSGKTKVVPLECESIPRLGLSLVTPLQLETIADPSDHLVDVVGFLTA 149
+R H +R+ T+ ++C IP+ + P + + D DV+G +
Sbjct: 88 TKFRCTGHWFRLNLIDITRFTKIDCSDIPKYHYDFI-PFKEVLESTKEDKYTDVIGHVVE 146
Query: 150 VSPVRIDVKGSSHVKIMMMELYD 172
+R V K++ + L D
Sbjct: 147 RDVLREKVVNGKKSKLIDLTLED 169