Miyakogusa Predicted Gene
- Lj0g3v0101129.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0101129.2 tr|G7LDT6|G7LDT6_MEDTR Replication factor A
protein OS=Medicago truncatula GN=MTR_8g062030 PE=4
SV=1,41.41,6e-18,DUF223,Domain of unknown function DUF223,CUFF.5668.2
(113 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g062030.1 | replication factor-A carboxy-terminal domain p... 95 1e-20
Medtr1g075850.1 | replication factor-A carboxy-terminal domain p... 90 5e-19
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p... 90 5e-19
Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 | 20... 86 9e-18
Medtr4g028320.1 | animal RPA1 domain protein | LC | chr4:9767872... 75 2e-14
Medtr4g022520.1 | DUF223 domain protein | HC | chr4:7510297-7517... 72 9e-14
Medtr8g036090.1 | animal RPA1 domain protein | HC | chr8:1327908... 72 1e-13
Medtr4g471610.1 | animal RPA1 domain protein | HC | chr4:2707183... 72 1e-13
Medtr3g078440.1 | animal RPA1 domain protein | HC | chr3:3535014... 72 1e-13
Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944... 71 2e-13
Medtr8g096680.1 | animal RPA1 domain protein | HC | chr8:4055821... 71 2e-13
Medtr1g036740.1 | animal RPA1 domain protein | HC | chr1:1349734... 71 2e-13
Medtr3g116750.1 | animal RPA1 domain protein | HC | chr3:5461096... 71 2e-13
Medtr3g095950.1 | animal RPA1 domain protein | HC | chr3:4384560... 71 2e-13
Medtr6g051890.1 | replication factor-A carboxy-terminal domain p... 69 8e-13
Medtr7g093810.1 | animal RPA1 domain protein | HC | chr7:3731542... 68 2e-12
Medtr7g032985.1 | hypothetical protein | HC | chr7:11639908-1163... 67 3e-12
Medtr8g078450.1 | DUF223 domain protein | LC | chr8:33442410-334... 67 5e-12
Medtr5g085220.1 | animal RPA1 domain protein | LC | chr5:3678902... 66 6e-12
Medtr1g094230.1 | animal RPA1 domain protein | LC | chr1:4243647... 65 2e-11
Medtr6g039240.1 | animal RPA1 domain protein | LC | chr6:1418076... 65 2e-11
Medtr3g084550.1 | DUF223 domain protein | LC | chr3:38189762-381... 64 2e-11
Medtr8g463820.1 | animal RPA1 domain protein | LC | chr8:2251463... 64 3e-11
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p... 64 4e-11
Medtr7g089660.1 | animal RPA1 domain protein | LC | chr7:3511416... 63 6e-11
Medtr1g072220.1 | DUF223 domain protein | LC | chr1:32050688-320... 63 6e-11
Medtr2g062200.1 | DUF223 domain protein | LC | chr2:26248587-262... 62 9e-11
Medtr8g059025.1 | animal RPA1 domain protein | LC | chr8:2054987... 62 1e-10
Medtr5g055160.1 | animal RPA1 domain protein | LC | chr5:2272064... 62 1e-10
Medtr3g037500.1 | transmembrane protein, putative | LC | chr3:13... 61 3e-10
Medtr8g088810.1 | DUF223 domain protein | LC | chr8:36895897-368... 61 3e-10
Medtr1g060700.1 | helix loop helix DNA-binding domain protein | ... 60 3e-10
Medtr3g056240.1 | DUF223 domain protein | HC | chr3:22396065-223... 59 1e-09
Medtr3g056270.1 | replication factor-A carboxy-terminal domain p... 59 1e-09
Medtr8g461360.1 | DUF223 domain protein | LC | chr8:21582245-215... 59 1e-09
Medtr2g099880.1 | DUF223 domain protein | LC | chr2:42842228-428... 59 1e-09
Medtr2g032570.1 | animal RPA1 domain protein | LC | chr2:1225599... 58 2e-09
Medtr8g062060.1 | DUF223 domain protein | LC | chr8:25911934-259... 57 4e-09
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p... 56 6e-09
Medtr4g046077.1 | replication factor-A carboxy-terminal domain p... 56 9e-09
Medtr3g067530.1 | DUF223 domain protein | LC | chr3:30107700-301... 54 2e-08
Medtr5g007120.1 | transmembrane protein, putative | HC | chr5:12... 54 4e-08
Medtr5g056060.1 | transmembrane protein, putative | HC | chr5:23... 53 6e-08
Medtr7g104000.1 | animal RPA1 domain protein | HC | chr7:4204740... 52 1e-07
Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268... 52 1e-07
Medtr4g036240.2 | replication factor-A carboxy-terminal domain p... 50 4e-07
Medtr8g479260.1 | replication factor-A carboxy-terminal domain p... 49 1e-06
Medtr3g055660.1 | plant OB fold protein | LC | chr3:21910372-219... 49 1e-06
Medtr2g048550.1 | replication factor-A carboxy-terminal domain p... 49 1e-06
Medtr4g014890.1 | DUF223 domain protein | LC | chr4:4267608-4264... 48 2e-06
Medtr8g467450.1 | animal RPA1 domain protein | LC | chr8:2424111... 48 2e-06
Medtr2g008650.1 | replication factor-A carboxy-terminal domain p... 48 2e-06
Medtr2g054710.1 | animal RPA1 domain protein | LC | chr2:2336383... 48 2e-06
Medtr1g085690.1 | DUF223 domain protein | HC | chr1:38294818-382... 47 3e-06
Medtr5g068430.1 | DUF223 domain protein | LC | chr5:28968884-289... 47 4e-06
Medtr1788s0010.1 | animal RPA1 domain protein | LC | scaffold178... 47 4e-06
Medtr6g069230.1 | animal RPA1 domain protein | LC | chr6:2491560... 46 6e-06
>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:25901653-25904109 | 20130731
Length = 575
Score = 94.7 bits (234), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 67/99 (67%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG VY IS+F + + GSYR HP++I+F T V S+ IP +G S + ++++
Sbjct: 72 EGEVYNISYFSVAPSTGSYRAATHPYKIVFQMTTKVQSCTSATIPLYGLSFTSIVDVSNH 131
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISD 109
+ ++LVD++G++TA SEER YV+DG VTK+++ E++D
Sbjct: 132 TVEYDYLVDVMGLVTAVSEEREYVRDGSVTKMIIFEVTD 170
>Medtr1g075850.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:33615520-33612872 | 20130731
Length = 528
Score = 89.7 bits (221), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 63/99 (63%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG VY +S F + ++GSYR T HP++I+F T V E + IP +G SL ++
Sbjct: 66 EGKVYQMSCFSVAPSVGSYRTTSHPYKIVFQMTTKVQVCEDASIPSFGISLCKIVDVCQH 125
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISD 109
+ ++LVD+LG +T S ER YV+DG VTK+++ EI+D
Sbjct: 126 TSDHDYLVDVLGFMTDISAEREYVRDGKVTKMVVFEITD 164
>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:33436158-33438920 | 20130731
Length = 517
Score = 89.7 bits (221), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/109 (39%), Positives = 65/109 (59%)
Query: 1 MFRKWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFS 60
+F + EG VY +S F + ++GSYR T HP++I+F T V E + IP G S
Sbjct: 62 LFYVFQSKLSEGKVYEMSCFSVAPSVGSYRTTLHPYKIVFQMTTKVQACEGASIPSLGIS 121
Query: 61 LKNAEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISD 109
L ++ + ++LVD+LG +T S ER YV+DG VTK+++ EI+D
Sbjct: 122 LCKIADVCQHTSDHDYLVDVLGFMTGISVEREYVRDGKVTKMVIFEITD 170
>Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 |
20130731
Length = 665
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 67/104 (64%), Gaps = 3/104 (2%)
Query: 9 FVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNV---HPAESSLIPRWGFSLKNAE 65
+EG VY +S F ++ N G+YR T H ++++F KT V H E SLIP G +L +
Sbjct: 66 LIEGKVYKLSNFTVLLNSGAYRTTHHTYKLIFQMKTKVEESHDYEISLIPNHGLTLTDIS 125
Query: 66 ELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISD 109
++ E+LVD++G++T S ER +V+DG +TK++++E++D
Sbjct: 126 QITSRTQDYEYLVDVIGLMTGISAEREFVRDGKLTKILVIELTD 169
>Medtr4g028320.1 | animal RPA1 domain protein | LC |
chr4:9767872-9767142 | 20130731
Length = 153
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 64/104 (61%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K E EG V+ IS F + N GSYRP+++ +++ F T V +++ L+P +S +
Sbjct: 46 KSKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTS 105
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + FLVD++G++T ER Y +DG+ TK+ ++E+
Sbjct: 106 AYDVFNESYDNNFLVDVIGVMTGVGVEREYERDGVKTKMNVIEL 149
>Medtr4g022520.1 | DUF223 domain protein | HC | chr4:7510297-7517059
| 20130731
Length = 206
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 62/104 (59%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K E EG V+ IS F + N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 25 KSKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 84
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + FLVD++G++T ER Y DG+ TK+ ++E+
Sbjct: 85 ASDVFNESYDNNFLVDVIGVMTGVGVEREYESDGVKTKMNVIEL 128
>Medtr8g036090.1 | animal RPA1 domain protein | HC |
chr8:13279086-13278300 | 20130731
Length = 172
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 64/104 (61%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F++ N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ ER Y +DG+ TK+ ++E+
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr4g471610.1 | animal RPA1 domain protein | HC |
chr4:27071837-27072623 | 20130731
Length = 172
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 64/104 (61%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F++ N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ ER Y +DG+ TK+ ++E+
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr3g078440.1 | animal RPA1 domain protein | HC |
chr3:35350146-35349360 | 20130731
Length = 172
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 64/104 (61%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F++ N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ ER Y +DG+ TK+ ++E+
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr4g016120.1 | DUF223 domain protein | HC | chr4:4940745-4944777
| 20130731
Length = 163
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 64/104 (61%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ EG V+ IS F++ NIGSYRP+++ +++ F T V +++ L+P +S
Sbjct: 56 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 115
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ E+ Y +DG+ TK+ ++E+
Sbjct: 116 APDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL 159
>Medtr8g096680.1 | animal RPA1 domain protein | HC |
chr8:40558216-40559002 | 20130731
Length = 172
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 63/104 (60%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F + N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ ER Y +DG+ TK+ ++E+
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr1g036740.1 | animal RPA1 domain protein | HC |
chr1:13497342-13498128 | 20130731
Length = 172
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 63/104 (60%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F + N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ ER Y +DG+ TK+ ++E+
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL 168
>Medtr3g116750.1 | animal RPA1 domain protein | HC |
chr3:54610965-54611750 | 20130731
Length = 172
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 64/104 (61%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ EG V+ IS F++ NIGSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ E+ Y +DG+ TK+ ++E+
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL 168
>Medtr3g095950.1 | animal RPA1 domain protein | HC |
chr3:43845609-43846394 | 20130731
Length = 172
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 64/104 (61%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ EG V+ IS F++ NIGSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ E+ Y +DG+ TK+ ++E+
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL 168
>Medtr6g051890.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:18071124-18068908 | 20130731
Length = 399
Score = 69.3 bits (168), Expect = 8e-13, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 52/87 (59%)
Query: 8 LFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEEL 67
L V+G VY I++F + ++GSYR T HP +I+F T V E+SLI G + N ++
Sbjct: 73 LLVKGKVYKIAYFSVAPSVGSYRSTLHPHKIVFQMNTKVLECENSLISPCGLTFSNISKI 132
Query: 68 NDDGAQSEFLVDMLGILTATSEERTYV 94
+ ++L D++G++T S ER +V
Sbjct: 133 CSHTDEYDYLFDVMGVMTDISVERIFV 159
>Medtr7g093810.1 | animal RPA1 domain protein | HC |
chr7:37315424-37314639 | 20130731
Length = 172
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 63/104 (60%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E V+ IS F++ NIGSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKNQLQERMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ E+ Y +DG+ TK+ ++E+
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEKEYERDGVKTKMNVIEL 168
>Medtr7g032985.1 | hypothetical protein | HC |
chr7:11639908-11639480 | 20130731
Length = 73
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 39 LFNTKTNVHPAESSLIPRWGFSLKNAEELNDDGAQSEFLVDMLGILTATSEERTYVKDGI 98
+F KT V SSLIP GFS E+ FLVD++G+L+ S ER YV+DG
Sbjct: 1 MFQVKTKVQAHASSLIPVHGFSFTKISEITSSTKDYNFLVDVIGVLSGMSTEREYVRDGK 60
Query: 99 VTKLMLLEISDEK 111
VT+++++E++D +
Sbjct: 61 VTRMIVIELTDHR 73
>Medtr8g078450.1 | DUF223 domain protein | LC |
chr8:33442410-33443580 | 20130731
Length = 157
Score = 66.6 bits (161), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 59/100 (59%)
Query: 14 VYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDDGAQ 73
V+ IS F + N GSYRP+ + +++ F T V ++ L+P +S A ++ ++
Sbjct: 2 VFTISSFDVASNNGSYRPSHNEYKLNFTINTKVKLSKIVLVPTNVYSFTPAPDVFNESYD 61
Query: 74 SEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISDEKYL 113
+ +LVD++G++T ER Y +DG+ TK+ ++E+ +L
Sbjct: 62 NNYLVDVIGVMTGVGVEREYERDGVKTKMNVIELDSNGFL 101
>Medtr5g085220.1 | animal RPA1 domain protein | LC |
chr5:36789021-36788235 | 20130731
Length = 172
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 61/104 (58%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F + N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFIVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + LVD++G++ ER Y +D + TK+ ++E+
Sbjct: 125 APDVFNESYDNNCLVDVIGVMIGVGVEREYERDSVKTKMNVIEL 168
>Medtr1g094230.1 | animal RPA1 domain protein | LC |
chr1:42436471-42437983 | 20130731
Length = 303
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F++ N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDG 97
A ++ ++ + +LVD++G++ ER Y +DG
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEREYERDG 158
>Medtr6g039240.1 | animal RPA1 domain protein | LC |
chr6:14180761-14182238 | 20130731
Length = 289
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 56/94 (59%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F++ N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDG 97
A ++ ++ + +LVD++G++ ER Y +DG
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEREYERDG 158
>Medtr3g084550.1 | DUF223 domain protein | LC |
chr3:38189762-38189098 | 20130731
Length = 131
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 60/104 (57%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS + N G YRP+++ +++ F T V +++ L+P +S
Sbjct: 24 KFKEQLQEGMVFTISSSDVASNSGLYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 83
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ ER Y DG+ TK+ ++E+
Sbjct: 84 APDVFNESYDNNYLVDVIGVMIGVGVEREYETDGVKTKMNVIEL 127
>Medtr8g463820.1 | animal RPA1 domain protein | LC |
chr8:22514633-22516142 | 20130731
Length = 283
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F + N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDG 97
A ++ ++ + +LVD++G++ ER Y +DG
Sbjct: 125 APDVFNESYDNNYLVDVIGVMIGVGVEREYERDG 158
>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21416239-21412307 | 20130731
Length = 549
Score = 63.5 bits (153), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 60/107 (56%)
Query: 1 MFRKWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFS 60
+ K+ + E V+ I F + N+GSYR +HP++I F T + + +P +
Sbjct: 62 LIYKYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQCDDKFVPADIYV 121
Query: 61 LKNAEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
+ ++ E+ +++L+D++G+L A E++Y ++G +K++ +E+
Sbjct: 122 IGDSREIFQSEYDTDYLIDVMGMLKAVGVEKSYTRNGSQSKMIPIEL 168
>Medtr7g089660.1 | animal RPA1 domain protein | LC |
chr7:35114160-35121568 | 20130731
Length = 236
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ EG V+ IS F++ NIGSYRP+++ +++ F T V +++ L+P +S
Sbjct: 65 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDG 97
A + ++ + +LVD++G++ E+ Y +DG
Sbjct: 125 APNVFNESYDNNYLVDVIGVMIGVGVEKEYERDG 158
>Medtr1g072220.1 | DUF223 domain protein | LC |
chr1:32050688-32051353 | 20130731
Length = 131
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 60/104 (57%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS + N YRP+++ +++ F T V +++ L+P +S
Sbjct: 24 KFKEQLQEGMVFTISSSDVASNSDLYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 83
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ ER Y +DG+ TK+ ++E+
Sbjct: 84 APDIFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL 127
>Medtr2g062200.1 | DUF223 domain protein | LC |
chr2:26248587-26247742 | 20130731
Length = 185
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 58/98 (59%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG VY +S F + N+GSYR T+H +++ F T V + +P + + N+ + +
Sbjct: 29 EGKVYSMSGFGVAANLGSYRTTKHEYKLNFQFNTKVKLCGKNSVPDDIYPISNSIVVFNS 88
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEIS 108
+++LVD++G+LT +R Y ++G TK++ ++++
Sbjct: 89 EYDTDYLVDVMGMLTGVGMQREYERNGAKTKMVAMKLN 126
>Medtr8g059025.1 | animal RPA1 domain protein | LC |
chr8:20549873-20550376 | 20130731
Length = 138
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG VY +SFF + ++GSYR T HP++++F KT V +ES LIP +G SL ++
Sbjct: 72 EGKVYKMSFFSVAPSVGSYRTTLHPYKLVFQMKTKVQVSESVLIPTYGVSLSKIADVCGH 131
Query: 71 GAQSEFL 77
+ ++L
Sbjct: 132 DVEYDYL 138
>Medtr5g055160.1 | animal RPA1 domain protein | LC |
chr5:22720640-22718177 | 20130731
Length = 270
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F++ N GSYRP+ + +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNNGSYRPSCNEYKLDFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDG 97
A + ++ + +LVD++G++ ER Y +DG
Sbjct: 125 APHVFNESYDNNYLVDVIGVMIGVGVEREYERDG 158
>Medtr3g037500.1 | transmembrane protein, putative | LC |
chr3:13783344-13781841 | 20130731
Length = 290
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
E VYV+ F L+ N+GS R T H ++I T V P + I R+G SL ++ E+N+
Sbjct: 24 ENCVYVVPNFCLVPNVGSTRVTSHRYKIKILITTTVVPCDIYTIQRYGVSLMSSAEINER 83
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGI--VTKLMLLEISDEK 111
L+D++G+LT+ + YV D + ++ LE++DE+
Sbjct: 84 RHGCAHLIDVMGLLTSLHYD--YVVDVAESLATVVRLELTDER 124
>Medtr8g088810.1 | DUF223 domain protein | LC |
chr8:36895897-36893498 | 20130731
Length = 306
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 62/109 (56%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F + N GSYRP+ + +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKVKLSKTILVPINVYSFTP 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISDEKY 112
A ++ ++ + +LVD++G++ ER Y ++G TK+ ++E+ Y
Sbjct: 125 APDVFNESYDNNYLVDVIGVIIGVGVEREYEREGTKTKMNVIELDSNGY 173
>Medtr1g060700.1 | helix loop helix DNA-binding domain protein | LC
| chr1:26430689-26426169 | 20130731
Length = 487
Score = 60.5 bits (145), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 43 KTNVHPAESSLIPRWGFSLKNAEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKL 102
+T V E L+P +G +L N E+N +++L+D +G++T SE R Y+KDG +TK+
Sbjct: 2 RTKVSVVEGPLLPMFGLTLTNIVEVNHQTVDNDYLIDGIGLMTVISEVREYIKDGKITKM 61
Query: 103 MLLEISD 109
+LL+++D
Sbjct: 62 ILLQLTD 68
>Medtr3g056240.1 | DUF223 domain protein | HC |
chr3:22396065-22393475 | 20130731
Length = 323
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG VY + N GSY+ T HP+++ F T P +L+ F ++
Sbjct: 72 EGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTKCLPLCGALVSGSDFKFVPISDIVGG 131
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISDEKY 112
++LVD++G+LT ER Y ++G TKL ++ + + Y
Sbjct: 132 SYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGY 173
>Medtr3g056270.1 | replication factor-A carboxy-terminal domain
protein | HC | chr3:22409504-22413525 | 20130731
Length = 719
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG VY + N GSY+ T HP+++ F T P +L+ F ++
Sbjct: 72 EGKVYSFENMGVAANGGSYKTTHHPYKLNFQFGTKCLPLFGALVSGSDFKFVPISDIVGG 131
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISDEKY 112
++LVD++G+LT ER Y ++G TKL ++ + + Y
Sbjct: 132 SYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGY 173
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG VY + N GSY+ T HP+++ T P +L+ F ++
Sbjct: 231 EGKVYSFENMGVAANGGSYKTTHHPYKLNVQFGTKCLPLCGALVSGSDFKFVPIFDIVGG 290
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISDEKY 112
++LVD++G+LT ER Y ++G TKL ++ + + Y
Sbjct: 291 SYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGY 332
>Medtr8g461360.1 | DUF223 domain protein | LC |
chr8:21582245-21584205 | 20130731
Length = 222
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 57/98 (58%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG VY +S F + N+GSYR T+H +++ F T V + + +P + + N ++ +
Sbjct: 15 EGKVYSMSNFGVAVNLGSYRTTKHEYKLNFQFNTKVKLCDKNGVPSDIYLIANLIDVFNS 74
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEIS 108
+++LV+++ +LT +R Y ++G TK++ +E+
Sbjct: 75 EYDTDYLVNVMSMLTGVGMQREYERNGAKTKMVAMELD 112
>Medtr2g099880.1 | DUF223 domain protein | LC |
chr2:42842228-42841554 | 20130731
Length = 137
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 63/104 (60%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS +++ N GSYRP+ + +++ F T V +++ L+P +S
Sbjct: 30 KFKEQLQEGMVFTISSSNVVSNSGSYRPSHNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 89
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
A ++ ++ + +LVD++G++ ER Y +DG+ TK+ ++E+
Sbjct: 90 APDVFNESYDNNYLVDVIGVMIGVGVEREYERDGVKTKMNVIEL 133
>Medtr2g032570.1 | animal RPA1 domain protein | LC |
chr2:12255994-12255202 | 20130731
Length = 174
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F++ N GSYRP+ + +++ F T V +++ L+P +S
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSCNEYKLDFTINTKVKLSKTVLVPTNVYSFTP 124
Query: 64 AEELNDDGAQSEFLVD--MLGILTATSEERTYVKDGIVTKLMLLEI 107
A + ++ + +LVD + I ER Y +DG+ TK+ ++E+
Sbjct: 125 APHVFNESYDNNYLVDVIGVMIGVGVGVEREYERDGVKTKMNVIEL 170
>Medtr8g062060.1 | DUF223 domain protein | LC |
chr8:25911934-25914219 | 20130731
Length = 530
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ + VE VY+I+ F ++ N+ + T +RI+F+ T++ S IP SL
Sbjct: 65 KFRHMLVENRVYIITMFSVLPNLDEFMSTSSAYRIVFHQDTDLMATTCSAIPECRLSLIT 124
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISDEK 111
+ +L + VD++G+LTA E ++ ++ E++DE+
Sbjct: 125 SADLLKKTRGCSYAVDVIGLLTAMHHEYFLDSTNHLSSVLKFELTDER 172
>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830642-11833873 | 20130731
Length = 560
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG VY + N GSY+ T +P+++ F T P +L+ F ++
Sbjct: 72 EGKVYSFENMGVAANGGSYKTTHYPYKLNFQFGTKCLPLCGALVSGSDFKFVPISDIVGG 131
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISDEKY 112
++LVD++G+LT ER Y ++G TKL ++ + + Y
Sbjct: 132 SYDCDYLVDVIGMLTGVGTEREYERNGSATKLNVIAMEADGY 173
>Medtr4g046077.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:16158485-16160769 | 20130731
Length = 405
Score = 55.8 bits (133), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 44/67 (65%)
Query: 44 TNVHPAESSLIPRWGFSLKNAEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLM 103
T V +ES IP++G SL ++ ++LVD++G++T S ER Y++DG VTK++
Sbjct: 3 TKVQVSESFTIPKYGVSLTKLVDVCAHTYDYDYLVDVVGLMTGISNEREYIRDGKVTKMV 62
Query: 104 LLEISDE 110
+ +++D+
Sbjct: 63 VFQLTDD 69
>Medtr3g067530.1 | DUF223 domain protein | LC |
chr3:30107700-30116637 | 20130731
Length = 127
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 14 VYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDDGAQ 73
V+ IS F + N G RP+++ +++ F T V ++ L+P +S A ++ ++
Sbjct: 2 VFTISSFDVASNSGLPRPSRNEYKLNFTINTKVKQSKIVLVPTNVYSFTPAPDVFNESYN 61
Query: 74 SEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISDEKYL 113
+ +LVD++G++T ER DG+ TK+ ++E+ +L
Sbjct: 62 NNYLVDVIGVMTGVGVER----DGVKTKMNVIELDSNGFL 97
>Medtr5g007120.1 | transmembrane protein, putative | HC |
chr5:1213024-1210695 | 20130731
Length = 227
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ EG V+ IS F++ N YRP++ +++ F T V + + L+P +S
Sbjct: 34 KFKNQLQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKLSITVLVPTNVYSFTP 93
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDG 97
A ++ ++ + +LVD++G++ ER Y +DG
Sbjct: 94 APDVFNEFYDNNYLVDVIGVMIGVGVEREYERDG 127
>Medtr5g056060.1 | transmembrane protein, putative | HC |
chr5:23106867-23105553 | 20130731
Length = 251
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ EG V+ IS F++ N YRP++ +++ F T V + + L+P +S
Sbjct: 59 KFKNQLQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKLSITILVPTNVYSFTP 118
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDG 97
A ++ ++ + +LVD++G++ ER Y +DG
Sbjct: 119 APDVFNEFYDNNYLVDVIGVMIGVGVEREYERDG 152
>Medtr7g104000.1 | animal RPA1 domain protein | HC |
chr7:42047405-42048721 | 20130731
Length = 242
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ EG V+ IS F++ N YRP++ +++ F T V + + L+P +S
Sbjct: 59 KFKNQLQEGMVFTISSFNVASNNDLYRPSRKEYKLNFTINTKVKLSITVLVPTNVYSFTP 118
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDG 97
A ++ ++ + +LVD++G++ ER Y +DG
Sbjct: 119 ALDVFNEFYDNNYLVDVIGVMIGVGVEREYERDG 152
>Medtr6g013455.1 | DUF223 domain protein | HC | chr6:4270954-4268124
| 20130731
Length = 272
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ EG V+ IS F++ N YRP++ +++ F T V + + L+P +S
Sbjct: 59 KFKNQLQEGMVFTISSFNVASNSDLYRPSRKEYKLNFTINTKVKLSITVLVPTNVYSFTP 118
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKL 102
A ++ ++ + +LVD++G++ ER Y +D V +L
Sbjct: 119 APDVFNEFYDNNYLVDVIGVMIGVGVEREYERDEYVEEL 157
>Medtr4g036240.2 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 480
Score = 50.4 bits (119), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 45/89 (50%)
Query: 24 GNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDDGAQSEFLVDMLGI 83
N GSY+ T +P+++ F T P +L+ F ++ ++LVD++G+
Sbjct: 5 ANGGSYKTTHYPYKLNFQFGTKCLPLCGALVSGSDFKFVPISDIVGGSYDCDYLVDVIGM 64
Query: 84 LTATSEERTYVKDGIVTKLMLLEISDEKY 112
LT ER Y ++G TKL ++ + + Y
Sbjct: 65 LTGVGTEREYERNGSATKLNVIAMEADGY 93
>Medtr8g479260.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:33777150-33779789 | 20130731
Length = 555
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG + + N G YR T+H +++ F + V + I + + L E+
Sbjct: 74 EGKCFSFENMGVANNGGGYRTTKHTYKLNFQLSSKVKYLPALTITKSPYQLVPISEVIGG 133
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
+++LVD++G+LT ER ++G +TKL ++E+
Sbjct: 134 TYDTDYLVDIIGVLTGVGSERELERNGNMTKLNVIEL 170
>Medtr3g055660.1 | plant OB fold protein | LC |
chr3:21910372-21907746 | 20130731
Length = 548
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
KW E+ E N Y + F ++ N + + + HPFR+ + T + P + IP F K+
Sbjct: 90 KWKEILKENNTYTMLNFKVLKNDVAVKASTHPFRLAVSGATIIKPVDFPTIPLASFRFKD 149
Query: 64 AEELNDDGAQSEFLVDMLGI---LTATSEERTYVK 95
E+ +++ L+D++G +T T+++ T ++
Sbjct: 150 FGEILAGNYRNDLLIDVIGAFQDITNTNKKGTIIR 184
>Medtr2g048550.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21410361-21406613 | 20130731
Length = 495
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%)
Query: 1 MFRKWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFS 60
++ K+ +L E N+Y++S + N+G R T HP+ +LF T V A + + +
Sbjct: 62 LYWKFHDLIKENNIYIVSNVKVDRNVGIMRTTPHPYVLLFQMNTRVKKAYFADVGPEFYR 121
Query: 61 LKNAEELNDDGAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEISDE 110
+ + D + L D++G+LT ++ + KL ++E++ E
Sbjct: 122 FNDPQMYFDTAYDRDCLGDVIGMLTDVRVKKIDAEGAACDKLAIIEMNHE 171
>Medtr4g014890.1 | DUF223 domain protein | LC | chr4:4267608-4264883
| 20130731
Length = 519
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
KW E+ E N Y + F ++ N + + + HPFR+ + T + P + IP F K+
Sbjct: 90 KWKEILKENNTYTMLNFKVLKNDVAVKASTHPFRLAVSGATIIKPVDFPAIPLASFRFKD 149
Query: 64 AEELNDDGAQSEFLVDMLGI---LTATSEERTYVK 95
E+ +++ L+D++G +T T+++ T ++
Sbjct: 150 FGEILAGNYRNDLLIDVIGAFQDITNTNKKGTIIR 184
>Medtr8g467450.1 | animal RPA1 domain protein | LC |
chr8:24241111-24240561 | 20130731
Length = 142
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
E + Y + +F + N+G Y T F+++F KT V ESS IP G S+ E+L+
Sbjct: 72 EEDAYKMFYFSIAPNVGYYHTTTQEFKLIFQMKTKVQKIESSAIPDNGLSVSKIEDLSKH 131
Query: 71 GAQSEFLV 78
FLV
Sbjct: 132 TVDYPFLV 139
>Medtr2g008650.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:1569207-1566568 | 20130731
Length = 555
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 49/97 (50%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG + + N G YR T+H +++ F + V + I + + L E+
Sbjct: 74 EGKCFSFENMGVANNGGGYRTTKHTYKLNFQFSSKVKYLPALTITKSPYQLVPISEVIGG 133
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
+++LVD++G+LT ER ++G +TKL ++E+
Sbjct: 134 TYDTDYLVDIIGVLTGVGSERELERNGNMTKLNVIEL 170
>Medtr2g054710.1 | animal RPA1 domain protein | LC |
chr2:23363838-23365033 | 20130731
Length = 271
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 48/97 (49%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
EG + + N G YR T+H +++ F + V + I + + L E
Sbjct: 74 EGKCFSFENMGVTNNGGGYRTTKHTYKLNFQFSSKVKYLPALTITKSPYQLVPISEFIGG 133
Query: 71 GAQSEFLVDMLGILTATSEERTYVKDGIVTKLMLLEI 107
+++LVD++G+LT ER ++G +TKL ++E+
Sbjct: 134 TYDTDYLVDIIGVLTGVGSERERERNGNMTKLNVIEL 170
>Medtr1g085690.1 | DUF223 domain protein | HC |
chr1:38294818-38296141 | 20130731
Length = 233
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ E EG V+ IS F++ N GSYRP+++ +++ F T V +++ L+P +S
Sbjct: 24 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTP 83
Query: 64 AEELNDDGAQSEFLV 78
A ++ ++ + +LV
Sbjct: 84 APDVFNESYDNNYLV 98
>Medtr5g068430.1 | DUF223 domain protein | LC |
chr5:28968884-28968008 | 20130731
Length = 195
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 47/91 (51%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K+ EG ++ IS F++ N YRP+ +++ F T V + + L+P +S
Sbjct: 58 KFKNQLQEGMMFTISSFNVASNSDLYRPSHKEYKLNFTINTKVKLSITVLVPTNVYSFTP 117
Query: 64 AEELNDDGAQSEFLVDMLGILTATSEERTYV 94
A ++ ++ + +LVD++G++ ER Y
Sbjct: 118 APDVFNEFYDNNYLVDVIGVMIGVGVEREYC 148
>Medtr1788s0010.1 | animal RPA1 domain protein | LC |
scaffold1788:754-253 | 20130731
Length = 139
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%)
Query: 4 KWAELFVEGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKN 63
K E EG V+ IS F + N GSYRP+++ +++ F T V +++ L+P +S +
Sbjct: 65 KSKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLSKTVLVPTNVYSFTS 124
Query: 64 AEELNDDGAQSEFLV 78
A ++ ++ + FLV
Sbjct: 125 AYDVFNESYDNNFLV 139
>Medtr6g069230.1 | animal RPA1 domain protein | LC |
chr6:24915605-24909459 | 20130731
Length = 356
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 11 EGNVYVISFFHLIGNIGSYRPTQHPFRILFNTKTNVHPAESSLIPRWGFSLKNAEELNDD 70
E YV S FH++ NI T + R++F++ T V + I ++G S+ +E ++
Sbjct: 168 ENRGYVFSDFHVVSNIADMMTTHNSHRLIFHSNTEVIFTDIPAIDKFGLSIHGSEAISKH 227
Query: 71 GAQSEFLVDMLGILTATSEERTYVKD--GIVTKLMLLEISDEKY 112
+LVD++G LT E YV D G ++ ++ E+++ ++
Sbjct: 228 VFGYSYLVDVIGFLTDVHPE--YVDDPFGRLSTVLRFELTNLRF 269