Miyakogusa Predicted Gene

Lj0g3v0100899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0100899.1 Non Characterized Hit- tr|I1L444|I1L444_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,46.67,2e-19,LTP_2,Bifunctional inhibitor/plant lipid transfer
protein/seed storage helical domain; no descriptio,gene.g7666.t1.1
         (128 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g069860.1 | Lipid transfer protein | HC | chr6:25204839-25...    98   2e-21

>Medtr6g069860.1 | Lipid transfer protein | HC |
           chr6:25204839-25203325 | 20130731
          Length = 205

 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 58/152 (38%), Positives = 69/152 (45%), Gaps = 25/152 (16%)

Query: 1   MQKLLPCQPFLKXXXXXXXXXXVPLNEMATNEVDCLCSVMNNPQLLLSINVSKEDAMKLP 60
           M +LLPCQPFLK           PL EM TN  DCLC  +NNP ++LS+ VSK+D MKLP
Sbjct: 54  MHQLLPCQPFLKAPNDPPPTCCDPLKEMVTNSSDCLCQFINNPTMILSLEVSKDDIMKLP 113

Query: 61  GACDIEVDISKCNXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------- 100
            AC I+VDISKCN                                               
Sbjct: 114 KACGIKVDISKCNANAVDGETSSKGASKEGSAESTSSASKESNDASVDSTSSTSTEASAE 173

Query: 101 -----NMISPYGIMSLGVPGFVALSTALVFSS 127
                 +I+PYGI   GVP FVA  T L+FS+
Sbjct: 174 STSSAKLITPYGITYFGVPAFVAFFTTLLFSA 205