Miyakogusa Predicted Gene

Lj0g3v0100739.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0100739.1 Non Characterized Hit- tr|D8LPN6|D8LPN6_ECTSI
Putative uncharacterized protein OS=Ectocarpus
silicul,46.94,2e-18,UPF0016,Uncharacterised protein family UPF0016;
seg,NULL; TRANSMEMBRANE PROTEIN HTP-1 RELATED,Unchar,CUFF.5644.1
         (231 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g046730.1 | GDT1-like protein | HC | chr1:17623011-1763196...   310   6e-85
Medtr5g009810.1 | GDT1-like protein | HC | chr5:2467567-2472426 ...    86   4e-17
Medtr7g079850.1 | GDT1-like protein | HC | chr7:30338141-3034186...    76   3e-14
Medtr1g111390.1 | transmembrane protein PFT27 | HC | chr1:503285...    64   1e-10

>Medtr1g046730.1 | GDT1-like protein | HC | chr1:17623011-17631961 |
           20130731
          Length = 365

 Score =  310 bits (794), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 168/242 (69%), Positives = 182/242 (75%), Gaps = 14/242 (5%)

Query: 1   MKGFGLHXXXXXXXXXXXXXXXXXXXXFCACSSKTTSLTTFRGRQKLRLQLAHGIIRAQA 60
           MKG G H                     C   S  T+L+  R RQKL L LA G IRAQA
Sbjct: 1   MKGLGSHTPLIPKGKPPLSFAILNALPSCTYLSGNTTLSPLRCRQKLGLSLARGTIRAQA 60

Query: 61  SNVGVGSGDHGSSNEKDSQNVF-------------ERNPINDSSPKIVKPPNRIPYPISI 107
           SN+ VG GD+GS+NEKDSQNV              ERN ++DSS KIVKP  +IPYP+SI
Sbjct: 61  SNISVGPGDYGSNNEKDSQNVSDRNSVDDSSSKISERNSVDDSSSKIVKP-TQIPYPVSI 119

Query: 108 ALVLFGCALVFSLIASLKGGPTAVLEAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQY 167
           A VLFGCALVFSLIA +KGGP++VL AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQY
Sbjct: 120 AFVLFGCALVFSLIAFVKGGPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQY 179

Query: 168 KKGLVLLGSIGALTLMSILSVVIGRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDA 227
           +KGLVLLGS+GAL LMSILSVVIGRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDA
Sbjct: 180 EKGLVLLGSMGALALMSILSVVIGRIFQSVPAQFQTTLPIGEYAAVTLLLFFGLKSIKDA 239

Query: 228 WK 229
           W 
Sbjct: 240 WD 241


>Medtr5g009810.1 | GDT1-like protein | HC | chr5:2467567-2472426 |
           20130731
          Length = 351

 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 46/93 (49%), Positives = 65/93 (69%), Gaps = 5/93 (5%)

Query: 137 KSGFTAAFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSVVIGRIFQS 196
            +GF +AF LIF SE+GDKTFFIAALLA +    +V +G+ GAL  M+++SV +GR F  
Sbjct: 136 STGFASAFLLIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVISVALGRTFHY 195

Query: 197 V----PAQF-QTTLPIGEYAAVTLLLFFGLKSI 224
           V    P +F +T LPI + AAV LL++FG+ ++
Sbjct: 196 VDELLPFRFGETDLPIDDIAAVCLLVYFGVSTL 228


>Medtr7g079850.1 | GDT1-like protein | HC | chr7:30338141-30341860 |
           20130731
          Length = 284

 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 62/91 (68%), Gaps = 5/91 (5%)

Query: 140 FTAAFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSVVIGRIFQSVPA 199
           F A+ ++I VSEIGD+TF IAAL+AM++ K +VL G++ AL +M++LS  +GRI  ++ +
Sbjct: 76  FFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALIIMTVLSTGLGRIVPNLIS 135

Query: 200 QFQTTLPIGEYAAVTLLLFFGLKSIKDAWKS 230
           +  T       AA  L LFFGL+ +  AWKS
Sbjct: 136 KKHT-----NSAATVLYLFFGLRLLYIAWKS 161


>Medtr1g111390.1 | transmembrane protein PFT27 | HC |
           chr1:50328505-50332843 | 20130731
          Length = 227

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 7/90 (7%)

Query: 139 GFTAAFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSIGALTLMSILSVVIGRIFQSVP 198
           GFT +  +  +SEIGDKTFF AA+LAM++ + LVL G + AL +M+ILSV++G    + P
Sbjct: 7   GFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLTGCLAALIVMTILSVLVG---WAAP 63

Query: 199 AQFQTTLPIGEYAAVTLLLF-FGLKSIKDA 227
                +     +   TLL F FGL S+K+A
Sbjct: 64  NLISRSWA---HHITTLLFFGFGLWSLKEA 90