Miyakogusa Predicted Gene

Lj0g3v0100629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0100629.1 Non Characterized Hit- tr|B9SEW6|B9SEW6_RICCO
Multiprotein-bridging factor, putative OS=Ricinus
comm,87.27,2e-19,ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1
(MULTIPROTEIN BRIDGING FACTOR 1),NULL; HTH_CROC1,Helix-,CUFF.5638.1
         (55 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g080090.1 | multiprotein bridging factor 1b-like protein |...   105   1e-23
Medtr2g084220.1 | multiprotein bridging factor 1b-like protein |...   103   3e-23
Medtr6g018330.1 | multiprotein bridging factor 1b-like protein |...    97   4e-21
Medtr7g117675.1 | DNA-binding helix turn-helix protein | LC | ch...    77   4e-15
Medtr1g047000.1 | transcriptional coactivator multiprotein bridg...    76   7e-15
Medtr6g086280.1 | multiprotein bridging factor 1b-like protein |...    73   5e-14
Medtr6g086280.2 | multiprotein bridging factor 1b-like protein |...    73   5e-14

>Medtr4g080090.1 | multiprotein bridging factor 1b-like protein | HC
           | chr4:31042066-31045251 | 20130731
          Length = 142

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/55 (92%), Positives = 53/55 (96%)

Query: 1   MQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQVIGKLERALGAKLRGNK 55
           MQARMDKKLTQ+QLAQIINEKPQVIQEYESGKAIPNQQ+I KLERALGAKLRG K
Sbjct: 88  MQARMDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQIISKLERALGAKLRGKK 142


>Medtr2g084220.1 | multiprotein bridging factor 1b-like protein | HC
           | chr2:35379970-35375982 | 20130731
          Length = 140

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 51/55 (92%), Positives = 53/55 (96%)

Query: 1   MQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQVIGKLERALGAKLRGNK 55
           MQAR +KKLTQAQLAQIINEKPQVIQEYESGKAIPNQQ+IGKLERALGAKLRG K
Sbjct: 86  MQARTEKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQIIGKLERALGAKLRGKK 140


>Medtr6g018330.1 | multiprotein bridging factor 1b-like protein | HC
           | chr6:7016019-7016567 | 20130731
          Length = 143

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 50/55 (90%)

Query: 1   MQARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQVIGKLERALGAKLRGNK 55
           MQ RMDKKLTQAQLAQII+EKPQVIQEYESGKAIPNQ +IGKLER LGAKL G K
Sbjct: 89  MQTRMDKKLTQAQLAQIISEKPQVIQEYESGKAIPNQMIIGKLERVLGAKLPGKK 143


>Medtr7g117675.1 | DNA-binding helix turn-helix protein | LC |
          chr7:48846113-48845627 | 20130731
          Length = 71

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/40 (92%), Positives = 39/40 (97%)

Query: 5  MDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQVIGKLE 44
          MDKKLTQAQLAQIINEKPQVI+EYESGKAIPNQ +IGKLE
Sbjct: 1  MDKKLTQAQLAQIINEKPQVIKEYESGKAIPNQMIIGKLE 40


>Medtr1g047000.1 | transcriptional coactivator multiprotein
          bridging factor | HC | chr1:17726160-17725667 |
          20130731
          Length = 56

 Score = 75.9 bits (185), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 36/41 (87%), Positives = 37/41 (90%)

Query: 15 AQIINEKPQVIQEYESGKAIPNQQVIGKLERALGAKLRGNK 55
           QIINEKPQVI EYESGKAIPNQ +IGKLERALGAKLRG K
Sbjct: 16 VQIINEKPQVIHEYESGKAIPNQHIIGKLERALGAKLRGKK 56


>Medtr6g086280.1 | multiprotein bridging factor 1b-like protein | HC
           | chr6:32390058-32393143 | 20130731
          Length = 151

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 45/52 (86%)

Query: 2   QARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQVIGKLERALGAKLRG 53
           +AR+DKK++Q  LA++INE+ QV+QEYE+GKA+ NQ V+GK+ER LG KLRG
Sbjct: 94  KARLDKKMSQGDLAKLINERVQVVQEYENGKAVINQGVLGKMERVLGVKLRG 145


>Medtr6g086280.2 | multiprotein bridging factor 1b-like protein | HC
           | chr6:32389995-32393233 | 20130731
          Length = 149

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 45/52 (86%)

Query: 2   QARMDKKLTQAQLAQIINEKPQVIQEYESGKAIPNQQVIGKLERALGAKLRG 53
           +AR+DKK++Q  LA++INE+ QV+QEYE+GKA+ NQ V+GK+ER LG KLRG
Sbjct: 94  KARLDKKMSQGDLAKLINERVQVVQEYENGKAVINQGVLGKMERVLGVKLRG 145