Miyakogusa Predicted Gene

Lj0g3v0099929.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0099929.1 tr|B3S4L3|B3S4L3_TRIAD Predicted protein
OS=Trichoplax adhaerens GN=TRIADDRAFT_59127 PE=4
SV=1,36.3,9e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.5616.1
         (372 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr...    68   1e-11

>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
           chr6:10401560-10398230 | 20130731
          Length = 538

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 27/40 (67%), Positives = 34/40 (85%)

Query: 153 EQRFPVSGEPVCLMCGRYGEYICNETDDDVCSMECKSELL 192
           +QR  + GEP C++CGRYGEYIC+ETDDDVCS+ECK  +L
Sbjct: 33  DQRDALPGEPQCIVCGRYGEYICDETDDDVCSLECKQSVL 72