Miyakogusa Predicted Gene

Lj0g3v0098669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0098669.1 Non Characterized Hit- tr|I1L2S3|I1L2S3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,66.07,0.000000000002,no description,DNA-binding pseudobarrel
domain,CUFF.5526.1
         (68 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g108780.1 | transcriptional factor B3 family protein | HC ...    65   1e-11
Medtr8g103940.1 | transcriptional factor B3 family protein | LC ...    65   2e-11
Medtr3g061340.1 | transcriptional factor B3 family protein | LC ...    64   2e-11
Medtr3g061320.1 | plant-specific B3-DNA-binding domain protein |...    64   4e-11
Medtr3g061290.1 | plant-specific B3-DNA-binding domain protein |...    62   1e-10
Medtr3g061330.1 | plant-specific B3-DNA-binding domain protein |...    61   3e-10
Medtr3g061370.1 | plant-specific B3-DNA-binding domain protein |...    60   6e-10
Medtr1g035460.1 | plant-specific B3-DNA-binding domain protein |...    58   2e-09
Medtr3g061350.1 | plant-specific B3-DNA-binding domain protein |...    57   3e-09
Medtr3g061310.1 | transcriptional factor B3 family protein | LC ...    57   3e-09
Medtr4g119990.1 | B3 DNA-binding domain protein | LC | chr4:4974...    55   2e-08
Medtr7g050720.1 | transcriptional factor B3 family protein | LC ...    48   2e-06
Medtr6g043890.1 | B3 DNA-binding domain protein | LC | chr6:1513...    48   3e-06
Medtr7g050560.1 | plant-specific B3-DNA-binding domain protein |...    46   7e-06
Medtr7g050590.1 | transcriptional factor B3 family protein | LC ...    46   7e-06

>Medtr1g108780.1 | transcriptional factor B3 family protein | HC |
          chr1:49164002-49166141 | 20130731
          Length = 461

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 41/53 (77%), Gaps = 1/53 (1%)

Query: 7  MQKLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFAS 59
          +Q++PN FT ++ GD+S P+FLK PD KE +IH  K +DG IW ++GWKEFA+
Sbjct: 10 LQRIPNAFTEKYIGDLSKPMFLKTPDVKEWEIHLTK-KDGDIWIQRGWKEFAT 61


>Medtr8g103940.1 | transcriptional factor B3 family protein | LC |
           chr8:43749832-43752569 | 20130731
          Length = 498

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 5/63 (7%)

Query: 1   MLTVSSMQ----KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKE 56
           ++T +++Q    K+P+ FT+++ GD+SNP+FLK PDDK+ ++H  K +DG IW  KGW E
Sbjct: 42  IVTSTNIQDGTLKIPDAFTKKYSGDLSNPMFLKTPDDKKWEVHLTK-KDGDIWIHKGWNE 100

Query: 57  FAS 59
           FA+
Sbjct: 101 FAT 103


>Medtr3g061340.1 | transcriptional factor B3 family protein | LC |
          chr3:24361666-24362971 | 20130731
          Length = 274

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLG 64
          K+PN FTR HG  +SNPV +KPPD  + K++W K  +G IWFEKGWK F     LG
Sbjct: 25 KIPNEFTRRHGVGLSNPVLIKPPDGTKWKVYWKKI-NGEIWFEKGWKTFTENYSLG 79


>Medtr3g061320.1 | plant-specific B3-DNA-binding domain protein |
          LC | chr3:24354366-24356126 | 20130731
          Length = 279

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLG 64
          K+PN FTR+HG  +SNPV +KPPD  + K++W K  +G IWFEKGWK F     LG
Sbjct: 25 KIPNKFTRKHGVGLSNPVLIKPPDGTKWKVYWKK-INGEIWFEKGWKYFIENYSLG 79


>Medtr3g061290.1 | plant-specific B3-DNA-binding domain protein |
          LC | chr3:24344016-24345659 | 20130731
          Length = 203

 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 45/66 (68%), Gaps = 3/66 (4%)

Query: 1  MLTVSSMQKL--PNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFA 58
          ++  S++Q+L  P+ FT++HG  +SNPV +KPPD  + K++W K  DG IWFEKGWK F 
Sbjct: 15 IILQSNLQRLKIPHKFTKKHGVGLSNPVLIKPPDGTKWKVYWKKI-DGEIWFEKGWKYFT 73

Query: 59 SVEMLG 64
              LG
Sbjct: 74 ENYSLG 79


>Medtr3g061330.1 | plant-specific B3-DNA-binding domain protein |
          LC | chr3:24357917-24359356 | 20130731
          Length = 251

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLG 64
          ++PN FTR +G  +SNPV +KPPD  + K++W K  +G IWFEKGWK F     LG
Sbjct: 25 QIPNKFTRRYGVHLSNPVLIKPPDGTKWKVYWKK-INGEIWFEKGWKYFTENYSLG 79


>Medtr3g061370.1 | plant-specific B3-DNA-binding domain protein |
          HC | chr3:24369308-24370598 | 20130731
          Length = 281

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLG 64
          ++P+ FT+ HG  +SNPV +K PDD + K++W K  +G IWFEKGWK F     LG
Sbjct: 22 QIPSKFTKRHGVGLSNPVVIKTPDDTKWKVYWKKI-NGEIWFEKGWKTFTENYSLG 76


>Medtr1g035460.1 | plant-specific B3-DNA-binding domain protein |
          LC | chr1:12873695-12875594 | 20130731
          Length = 396

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)

Query: 10 LPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEML 63
          +P GFTR+H  D+ NPVFLK PD K+ ++   K  +G IWF+KGWKEFA+   L
Sbjct: 2  IPKGFTRDHMSDMLNPVFLKTPDGKKWEMCTTK-INGDIWFQKGWKEFATYYSL 54


>Medtr3g061350.1 | plant-specific B3-DNA-binding domain protein |
          LC | chr3:24365409-24364010 | 20130731
          Length = 284

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFA 58
          +LPN FTR+HG  +SNPV +K PD    K++W K  +G +WFEKGWK F 
Sbjct: 25 QLPNKFTRKHGVGLSNPVLIKLPDGTGWKVYWKKI-NGEMWFEKGWKTFT 73


>Medtr3g061310.1 | transcriptional factor B3 family protein | LC |
          chr3:24351032-24352721 | 20130731
          Length = 285

 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 1/50 (2%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFA 58
          ++PN FTR +G  ++NPV +K PD  + K++W K  +G IWFEKGWK F 
Sbjct: 25 QIPNNFTRRYGVGLTNPVLIKAPDGTKWKVYWKKI-NGEIWFEKGWKHFT 73


>Medtr4g119990.1 | B3 DNA-binding domain protein | LC |
          chr4:49742159-49745391 | 20130731
          Length = 377

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 33/57 (57%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLGE 65
          K+P  F R H   ++NPV L+ P+  E K+ W K  D  +WF  GWKEFA    LG+
Sbjct: 30 KVPVSFVRRHWLGITNPVTLRLPNMTENKVFWEKTSDYNVWFCNGWKEFAKYLSLGD 86


>Medtr7g050720.1 | transcriptional factor B3 family protein | LC |
          chr7:17612279-17615149 | 20130731
          Length = 320

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 10 LPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLGE 65
          +P  F  ++G  +SN ++LK P+  + K++  K  DG IWFEKGWKEF     L +
Sbjct: 26 IPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLVK-SDGKIWFEKGWKEFVKYHSLSQ 80


>Medtr6g043890.1 | B3 DNA-binding domain protein | LC |
          chr6:15133431-15136636 | 20130731
          Length = 342

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 29/51 (56%)

Query: 9  KLPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFAS 59
          ++P  F R H   ++NPV L+ P   +  + W K  D  +WF  GWKEFA+
Sbjct: 30 RVPINFARRHWHGITNPVTLRLPTMAQMNVTWEKTSDYDVWFCNGWKEFAN 80


>Medtr7g050560.1 | plant-specific B3-DNA-binding domain protein |
          HC | chr7:16862100-16864372 | 20130731
          Length = 315

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 10 LPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFA 58
          +P  F  ++G  +SN ++LK P+  + K++  K  +G IWFEKGWKEFA
Sbjct: 29 MPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLLK-INGKIWFEKGWKEFA 76


>Medtr7g050590.1 | transcriptional factor B3 family protein | LC |
          chr7:16873037-16874565 | 20130731
          Length = 297

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 10 LPNGFTREHGGDVSNPVFLKPPDDKERKIHWNKHEDGYIWFEKGWKEFASVEMLG 64
          +P  F  ++G  +S  ++LK P+  + K++  K  DG IWFEKGWKEFA    L 
Sbjct: 2  MPRKFVEKYGEGLSKAIYLKTPNGAKWKLNLVK-SDGKIWFEKGWKEFAKHHSLA 55