Miyakogusa Predicted Gene

Lj0g3v0098479.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0098479.2 tr|E1U253|E1U253_WHEAT Phytochrome and flowering
time protein 1 OS=Triticum aestivum PE=2 SV=1,36.13,2e-17,VWFA,von
Willebrand factor, type A; Med25_VWA,Mediator complex, subunit Med25,
von Willebrand factor,CUFF.5514.2
         (153 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g085080.1 | mediator complex subunit 25 von willebrand fac...   177   5e-45
Medtr6g085100.1 | mediator complex subunit 25 von willebrand fac...   173   5e-44
Medtr5g054680.1 | phytochrome and flowering time regulatory prot...    80   8e-16
Medtr1g013000.1 | mediator of RNA polymerase II transcription su...    79   1e-15
Medtr6g085130.1 | hypothetical protein | LC | chr6:32102407-3209...    58   3e-09

>Medtr6g085080.1 | mediator complex subunit 25 von willebrand factor
           type A protein | LC | chr6:32077390-32069017 | 20130731
          Length = 713

 Score =  177 bits (448), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 85/154 (55%), Positives = 112/154 (72%), Gaps = 4/154 (2%)

Query: 1   MVTKKWLSIVVDGNAALRPHWPHIVSEYLEKIVRRFLINCDEEGAYLGLLHYNTN---FD 57
           M  K+WL+IVVDGN AL  +W  I+S YLEKIVR F+    E+ +YLGL+ YN N    +
Sbjct: 1   MENKRWLNIVVDGNKALEKYWTDILSNYLEKIVRCFVGESQEQESYLGLVLYNANSELVE 60

Query: 58  AGYTVRFVEWTKDVNRFLQALSSLSFNGNSQDQYTMADGLAEALMMFLKPFNYIMTKEEY 117
           AGY ++F+ WTKDVN+F++ LS LSFNGN  +Q TMA+GLAEAL+M+ KP +  MT+ EY
Sbjct: 61  AGYDMQFINWTKDVNKFMENLSHLSFNGNDANQSTMAEGLAEALVMYPKPCD-TMTEREY 119

Query: 118 NSAERHCLLVTAGDPIPRRMLVSMPSIREGQVVG 151
             +ERHC+LV  GDP P+ MLV +P I+  QV+G
Sbjct: 120 YISERHCILVAPGDPAPKSMLVCLPMIQRAQVIG 153


>Medtr6g085100.1 | mediator complex subunit 25 von willebrand factor
           type A protein | LC | chr6:32089756-32081059 | 20130731
          Length = 752

 Score =  173 bits (439), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 84/154 (54%), Positives = 111/154 (72%), Gaps = 4/154 (2%)

Query: 1   MVTKKWLSIVVDGNAALRPHWPHIVSEYLEKIVRRFLINCDEEGAYLGLLHYNTN---FD 57
           M  K+WL+IVVDGN AL  +W  I+S YLEKIVR F+    E+ +YLGL+ YN N    +
Sbjct: 1   MENKRWLNIVVDGNKALEQYWHDILSNYLEKIVRCFVGESQEQESYLGLVLYNANSELVE 60

Query: 58  AGYTVRFVEWTKDVNRFLQALSSLSFNGNSQDQYTMADGLAEALMMFLKPFNYIMTKEEY 117
           AGY ++F+ WTKDV +F++ LS LSFNGN  +Q TMA+GLAEAL+M+ KP +  MT+ EY
Sbjct: 61  AGYDMQFINWTKDVTKFMENLSHLSFNGNDANQSTMAEGLAEALVMYPKPCD-TMTEREY 119

Query: 118 NSAERHCLLVTAGDPIPRRMLVSMPSIREGQVVG 151
             +ERHC+LV  GDP P+ MLV +P I+  QV+G
Sbjct: 120 YISERHCILVAPGDPAPKSMLVCLPMIQRAQVIG 153


>Medtr5g054680.1 | phytochrome and flowering time regulatory protein
           | HC | chr5:22512525-22526575 | 20130731
          Length = 820

 Score = 80.1 bits (196), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 8/151 (5%)

Query: 2   VTKKWLSIVVDGNAALRPHWPHIVSEYLEKIVRRFLINCDE------EGAYLGLLHYNTN 55
           + +K L + V+  AA+ P+W  ++ +YLEKIVR    N               L+ YNT+
Sbjct: 1   MAEKQLIVAVETTAAMGPYWDTLLMDYLEKIVRCLGGNESTGQKPSGSNVEFSLVTYNTH 60

Query: 56  -FDAGYTVRFVEWTKDVNRFLQALSSLSFNGNSQDQYTMADGLAEALMMFLKPFNYIMTK 114
              +G  V+   WT+D + FLQ L S+ F+G   +   +A+GLAEALMMF  P       
Sbjct: 61  GCYSGILVQRTGWTRDPDVFLQWLESIPFSGGGFNDAAIAEGLAEALMMF-PPSQSGGLN 119

Query: 115 EEYNSAERHCLLVTAGDPIPRRMLVSMPSIR 145
           ++      HC+LV A +P P +  V +P ++
Sbjct: 120 QQNVDTNMHCILVAASNPYPLQTPVYVPQLQ 150


>Medtr1g013000.1 | mediator of RNA polymerase II transcription
           subunit 25 | LC | chr1:2786873-2785071 | 20130731
          Length = 600

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 13/152 (8%)

Query: 2   VTKKWLSIVVDGNAALRPHWPHIVSEYLEKIVRRFLINCDEE----GAYLGLLHYNTNFD 57
           + +K + +VV+  AA+ PHW  +  +YL KIV+     C  E     A   L+ Y+T+  
Sbjct: 1   MAEKKVIVVVESTAAMGPHWDTLQVDYLNKIVKSL---CGNEPAVSNAQFALVTYHTH-- 55

Query: 58  AGYTVRFVE---WTKDVNRFLQALSSLSFNGNSQDQYTMADGLAEALMMFLKPFNYIMTK 114
             Y+   V+   WT+D   FL  LSS+SF+G   +   +A+GLAEALMMF  P       
Sbjct: 56  GIYSPVLVQRSGWTRDPEVFLDWLSSISFSGGGLNDTAVAEGLAEALMMF-SPSQSESPN 114

Query: 115 EEYNSAERHCLLVTAGDPIPRRMLVSMPSIRE 146
           ++      HC+LV A +P P +  + +P   E
Sbjct: 115 QKNVDMPMHCILVAASNPYPLKRPIYVPKKNE 146


>Medtr6g085130.1 | hypothetical protein | LC |
           chr6:32102407-32098176 | 20130731
          Length = 624

 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)

Query: 103 MFLKPFNYIMTKEEYNSAERHCLLVTAGDPIPRRMLVSMPSIREGQVVG 151
           M+ KP +  MT+ EY ++ERHC+LV  GDP P+ MLV +P I+  QV+G
Sbjct: 1   MYPKPCD-TMTEREYYNSERHCILVAPGDPAPKSMLVCLPMIQRAQVIG 48