Miyakogusa Predicted Gene

Lj0g3v0098329.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0098329.2 tr|I0Z0T7|I0Z0T7_9CHLO Acetolactate synthase
OS=Coccomyxa subellipsoidea C-169 PE=4
SV=1,45,1e-16,Ubiquitin-like,NULL; UBX,UBX; no description,NULL;
Domain present in ubiquitin-regulatory prote,UBX;,CUFF.5499.2
         (98 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g432670.1 | Ara4-interacting protein | HC | chr8:12392209-...   173   3e-44
Medtr4g102810.1 | Ara4-interacting protein | HC | chr4:42612859-...   113   4e-26
Medtr4g105430.1 | FAS-associated factor 2-B-like protein | HC | ...    63   6e-11
Medtr1g077740.1 | FAS-associated factor 2-B-like protein | HC | ...    62   1e-10
Medtr8g070760.1 | structural constituent of ribosome protein, pu...    49   1e-06

>Medtr8g432670.1 | Ara4-interacting protein | HC |
           chr8:12392209-12398954 | 20130731
          Length = 500

 Score =  173 bits (439), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 80/96 (83%), Positives = 88/96 (91%)

Query: 3   DKKEIMLPKEPPLGDEKVITIVVRMPNGNRCERRFLKTDKLQLLFDFIDIHGAVKPGSYR 62
           D K+IMLP EPPLGDEK ITIVVRMP+G RCERRF KTDKLQLLFDFIDI+GAVKPG+YR
Sbjct: 405 DAKKIMLPNEPPLGDEKAITIVVRMPDGGRCERRFFKTDKLQLLFDFIDIYGAVKPGTYR 464

Query: 63  IVKSYPRCAYSINDSSSTLNEVGLSNKNEALFLELI 98
           +V+SYPR AYS+ND S+TLNE GLSNKNEALFLELI
Sbjct: 465 VVRSYPRRAYSVNDRSATLNEAGLSNKNEALFLELI 500


>Medtr4g102810.1 | Ara4-interacting protein | HC |
           chr4:42612859-42608514 | 20130731
          Length = 580

 Score =  113 bits (282), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 53/97 (54%), Positives = 73/97 (75%)

Query: 2   LDKKEIMLPKEPPLGDEKVITIVVRMPNGNRCERRFLKTDKLQLLFDFIDIHGAVKPGSY 61
           L  KE+ LP EP   D+  + ++V+MP+G+R  RRFL++ KLQ LFDFIDI   VKP SY
Sbjct: 484 LAAKEVSLPPEPSSDDDNAVNLMVKMPDGSRRGRRFLRSHKLQSLFDFIDIGRQVKPSSY 543

Query: 62  RIVKSYPRCAYSINDSSSTLNEVGLSNKNEALFLELI 98
           R+V+ YPR A+ + +S+ TL+E+GL+NK EALFLEL+
Sbjct: 544 RLVRPYPRRAFGVEESAVTLDELGLTNKQEALFLELV 580


>Medtr4g105430.1 | FAS-associated factor 2-B-like protein | HC |
           chr4:43746722-43748994 | 20130731
          Length = 372

 Score = 62.8 bits (151), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)

Query: 19  KVITIVVRMPNGNRCERRFLKTDKLQLLFDFIDIHGAVKPGSYRIVKSYPRCAYSINDSS 78
           +V  I++R PNG R E  FL TDK+Q +F +ID  G     +YR++ ++PR  Y ++   
Sbjct: 294 QVAQILIRFPNGERREHTFLCTDKIQSIFSYIDSLGLSGIENYRLISNFPRRVYGVDQMR 353

Query: 79  STLNEVGLSNKNEALFLE 96
            TL +VGL  K  +LFLE
Sbjct: 354 MTLKDVGLYPK-ASLFLE 370


>Medtr1g077740.1 | FAS-associated factor 2-B-like protein | HC |
           chr1:34722081-34728616 | 20130731
          Length = 467

 Score = 62.0 bits (149), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 2/95 (2%)

Query: 3   DKKEIMLPKEPPLGDEKVITIVVRMPNGNRCERRFLKTDKLQLLFDFIDIHGAVKPGSYR 62
           ++K   L +EP  G   V  ++VR PNG R ERRF  T  +Q L+D++D  G ++  +Y 
Sbjct: 373 EEKAQSLGEEPEKG-PNVTQVLVRFPNGVRKERRFNSTVTIQSLYDYVDSLGCLEVENYS 431

Query: 63  IVKSYPRCAYSINDSSSTLNEVGLSNKNEALFLEL 97
           +V ++PR  Y     + +L E GL +   +LF+EL
Sbjct: 432 LVSNFPRVVYGQEKLALSLKEAGL-HPQASLFVEL 465


>Medtr8g070760.1 | structural constituent of ribosome protein,
           putative | HC | chr8:29819639-29812173 | 20130731
          Length = 461

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 2/81 (2%)

Query: 9   LPKEPPLGDEKVITIVVRMPNGNRCERRFLKTDKLQLLFDFIDIH-GAVKPGSYRIVKSY 67
           LP+EP      +  + VR+P+G R +R FL+++ +QLL+ FI +  G  +   +++  + 
Sbjct: 372 LPEEPKAERNLLCRVGVRLPDGRRVQRNFLRSEPIQLLWSFIAVQLGEDETKPFKLTHAI 431

Query: 68  PRCAYSIN-DSSSTLNEVGLS 87
           P    +++ +S+ST  E GL+
Sbjct: 432 PGATKNLDYESNSTFEESGLA 452