Miyakogusa Predicted Gene

Lj0g3v0098249.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0098249.1 Non Characterized Hit- tr|I1JC93|I1JC93_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.10656
PE,58.73,0.00000007, ,CUFF.5489.1
         (63 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g032440.1 | threonine endopeptidase | HC | chr5:13932332-1...    47   3e-06

>Medtr5g032440.1 | threonine endopeptidase | HC |
          chr5:13932332-13928123 | 20130731
          Length = 182

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 10/60 (16%)

Query: 1  MGLTTLHPIPLSKLPTASTFLPKPFLPPRQQTLITPSAALLSRSIFVRNLLTRATSSDET 60
          MG  T+ P+ LSKLP +  F  KP  PP+         ALLSRS F+RN+  RAT+S+E 
Sbjct: 1  MGHCTVQPLTLSKLPNSFAFHHKPSFPPKH--------ALLSRSAFLRNV--RATASEEN 50