Miyakogusa Predicted Gene

Lj0g3v0097989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0097989.1 Non Characterized Hit- tr|I1NJ85|I1NJ85_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22152 PE,96,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; P-loop containing nucleoside
triphosphate hydrolase,CUFF.5529.1
         (260 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g059390.1 | formate-tetrahydrofolate ligase | HC | chr5:24...   273   8e-74
Medtr1g116140.1 | formate-tetrahydrofolate ligase | HC | chr1:52...   273   2e-73

>Medtr5g059390.1 | formate-tetrahydrofolate ligase | HC |
           chr5:24632256-24636188 | 20130731
          Length = 627

 Score =  273 bits (699), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 132/170 (77%), Positives = 141/170 (82%)

Query: 91  VRKLQVLSPVPADIDIANSVEPVHISEIAKDLNLSPNHYDLYGKYKAKVLLSVLDELQGS 150
           +RKL V+SPVP+DIDIANSV+P+HISEIA  LNL+PNHYDLYGKYKAKVLLS LDELQ S
Sbjct: 11  MRKLDVVSPVPSDIDIANSVQPIHISEIANHLNLTPNHYDLYGKYKAKVLLSALDELQES 70

Query: 151 EDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAYLDKKVVTCVRQPSQGPTFGIKXXXXX 210
           +DGYYVVVGGITPTPLGEGKSTTTVGLCQALGA+LDKKVVTC+RQPSQGPTFGIK     
Sbjct: 71  KDGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCIRQPSQGPTFGIKGGAAG 130

Query: 211 XXYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRFFHESTQSDKALL 260
             YSQVIPMDEFNLHLTGDIH               R FHESTQSDKAL 
Sbjct: 131 GGYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALF 180


>Medtr1g116140.1 | formate-tetrahydrofolate ligase | HC |
           chr1:52498893-52494182 | 20130731
          Length = 699

 Score =  273 bits (697), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 132/169 (78%), Positives = 140/169 (82%)

Query: 92  RKLQVLSPVPADIDIANSVEPVHISEIAKDLNLSPNHYDLYGKYKAKVLLSVLDELQGSE 151
           RKL V+SPVP+DIDIANSV+P+HISEIA  LNL+PNHYDLYGKYKAKVLLS LDELQ S+
Sbjct: 71  RKLDVVSPVPSDIDIANSVQPIHISEIANHLNLTPNHYDLYGKYKAKVLLSALDELQESK 130

Query: 152 DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAYLDKKVVTCVRQPSQGPTFGIKXXXXXX 211
           DGYYVVVGGITPTPLGEGKSTTTVGLCQALGA+LDKKVVTC+RQPSQGPTFGIK      
Sbjct: 131 DGYYVVVGGITPTPLGEGKSTTTVGLCQALGAFLDKKVVTCIRQPSQGPTFGIKGGAAGG 190

Query: 212 XYSQVIPMDEFNLHLTGDIHXXXXXXXXXXXXXXXRFFHESTQSDKALL 260
            YSQVIPMDEFNLHLTGDIH               R FHESTQSDKAL 
Sbjct: 191 GYSQVIPMDEFNLHLTGDIHAITAANNLLAAAIDTRIFHESTQSDKALF 239