Miyakogusa Predicted Gene
- Lj0g3v0097909.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0097909.1 Non Characterized Hit- tr|I1LDL9|I1LDL9_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,91.1,0,Pectin
lyase-like,Pectin lyase fold/virulence factor;
Glyco_hydro_28,Glycoside hydrolase, family 28;,CUFF.5473.1
(166 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g100050.1 | pectin lyase superfamily protein | HC | chr1:4... 277 3e-75
Medtr1g100040.1 | pectin lyase superfamily protein | HC | chr1:4... 268 2e-72
Medtr7g088550.1 | pectin lyase superfamily protein | HC | chr7:3... 263 4e-71
Medtr1g100060.1 | pectin lyase superfamily protein | HC | chr1:4... 258 2e-69
Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family p... 254 2e-68
Medtr1g099850.1 | pectin lyase superfamily protein | HC | chr1:4... 253 5e-68
Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family p... 234 2e-62
Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family p... 226 5e-60
Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family p... 195 2e-50
Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family p... 194 2e-50
Medtr1g086030.1 | polygalacturonase/glycoside hydrolase family p... 192 1e-49
Medtr1g086030.2 | polygalacturonase/glycoside hydrolase family p... 192 1e-49
Medtr4g124980.1 | pectin lyase superfamily protein | HC | chr4:5... 177 3e-45
Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family p... 176 1e-44
Medtr2g042740.1 | pectin lyase superfamily protein | HC | chr2:1... 173 9e-44
Medtr2g435340.3 | polygalacturonase/glycoside hydrolase family p... 163 5e-41
Medtr2g435340.2 | polygalacturonase/glycoside hydrolase family p... 163 5e-41
Medtr2g435340.1 | polygalacturonase/glycoside hydrolase family p... 163 7e-41
Medtr3g096330.1 | glycoside hydrolase family 28 protein | HC | c... 162 9e-41
Medtr5g090160.1 | polygalacturonase/glycoside hydrolase family p... 162 2e-40
Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family p... 160 7e-40
Medtr2g083670.1 | pectin lyase superfamily protein | HC | chr2:3... 104 3e-23
Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family p... 86 2e-17
Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family p... 80 8e-16
Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-3273117... 79 2e-15
Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 ... 77 8e-15
Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family p... 76 1e-14
Medtr2g042750.1 | hypothetical protein | LC | chr2:18643705-1864... 75 3e-14
Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family p... 75 3e-14
Medtr6g048610.1 | polygalacturonase | HC | chr6:17584998-1758422... 72 2e-13
Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 ... 69 1e-12
Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-1451629... 69 2e-12
Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family p... 69 3e-12
Medtr8g065030.1 | pectin lyase superfamily protein | HC | chr8:2... 67 5e-12
Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 ... 67 6e-12
Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 ... 67 7e-12
Medtr1g052315.1 | endo polygalacturonase | HC | chr1:21186740-21... 67 7e-12
Medtr7g092470.1 | exo-polyalpha-D-galacturonosidase-like protein... 65 2e-11
Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family p... 65 3e-11
Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family p... 65 3e-11
Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 | ... 64 6e-11
Medtr4g094715.1 | pectin lyase superfamily protein | HC | chr4:3... 64 6e-11
Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 ... 63 1e-10
Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-4452318... 63 1e-10
Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-4452318... 63 1e-10
Medtr7g091840.1 | endo polygalacturonase | HC | chr7:36349369-36... 63 1e-10
Medtr2g049400.1 | pectin lyase superfamily protein | LC | chr2:2... 62 2e-10
Medtr8g077320.1 | pectin lyase superfamily protein | LC | chr8:3... 62 2e-10
Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 ... 62 3e-10
Medtr8g010050.1 | pectin lyase superfamily protein | LC | chr8:2... 61 5e-10
Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-2485865... 60 6e-10
Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family p... 60 9e-10
Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 ... 60 1e-09
Medtr2g032710.2 | polygalacturonase plant-like protein | HC | ch... 59 1e-09
Medtr2g032710.1 | polygalacturonase plant-like protein | HC | ch... 59 1e-09
Medtr7g091850.1 | endo polygalacturonase | HC | chr7:36360735-36... 59 1e-09
Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-3252202... 59 2e-09
Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 ... 59 2e-09
Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-1355938... 59 3e-09
Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family p... 57 7e-09
Medtr8g009810.1 | pectin lyase superfamily protein | HC | chr8:2... 57 1e-08
Medtr2g029170.1 | endo-polygalacturonase | HC | chr2:10881421-10... 56 2e-08
Medtr5g034090.2 | polygalacturonase | HC | chr5:14734905-1473875... 55 3e-08
Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-4695913... 55 4e-08
Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-1473941... 54 5e-08
Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 ... 53 2e-07
Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 | ... 52 2e-07
Medtr8g065010.1 | polygalacturonase plant-like protein | HC | ch... 52 2e-07
Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 ... 52 2e-07
Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-4988630... 51 4e-07
Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family p... 51 5e-07
Medtr2g058640.1 | polygalacturonase 11c, putative | HC | chr2:24... 51 5e-07
Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family ... 51 6e-07
Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family p... 51 6e-07
Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-3939047... 49 2e-06
Medtr5g063430.1 | polygalacturonase/glycoside hydrolase family p... 48 4e-06
>Medtr1g100050.1 | pectin lyase superfamily protein | HC |
chr1:45079785-45077811 | 20130731
Length = 473
Score = 277 bits (709), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 129/147 (87%), Positives = 138/147 (93%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGRDAPAGRFSSLIFGT+LTDV+ITG NGTIDGQGSYWWDKFHK Q LTRPYMIEIMYS
Sbjct: 135 RGRDAPAGRFSSLIFGTNLTDVIITGDNGTIDGQGSYWWDKFHKKQLTLTRPYMIEIMYS 194
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
QIQISNLTL+NSP+WFVHPIYSS+III GLTILAPVDSPNTDGI+PDSC+N RIED +I
Sbjct: 195 DQIQISNLTLINSPTWFVHPIYSSNIIINGLTILAPVDSPNTDGINPDSCTNVRIEDNFI 254
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
VSGDDCIA+KSGWDEYGIKVGMPSQ I
Sbjct: 255 VSGDDCIAIKSGWDEYGIKVGMPSQQI 281
>Medtr1g100040.1 | pectin lyase superfamily protein | HC |
chr1:45076650-45074575 | 20130731
Length = 481
Score = 268 bits (685), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 124/146 (84%), Positives = 135/146 (92%)
Query: 21 GRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSS 80
GR+A GRFSSL+FGT+LTDV+ITG+NGTIDGQGSYWWDKFHKGQ K+TRPYMIEIMYS
Sbjct: 142 GRNASDGRFSSLVFGTNLTDVIITGNNGTIDGQGSYWWDKFHKGQMKITRPYMIEIMYSD 201
Query: 81 QIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIV 140
QIQISNLTL+NSPSWFVHP+YSS+III GLTILAPVD PNTDGIDPDSC+N RIED YIV
Sbjct: 202 QIQISNLTLINSPSWFVHPVYSSNIIINGLTILAPVDIPNTDGIDPDSCTNVRIEDNYIV 261
Query: 141 SGDDCIAVKSGWDEYGIKVGMPSQHI 166
SGDDCIA+KSGWDEYGIK G PSQ I
Sbjct: 262 SGDDCIAIKSGWDEYGIKFGKPSQQI 287
>Medtr7g088550.1 | pectin lyase superfamily protein | HC |
chr7:34506744-34504347 | 20130731
Length = 476
Score = 263 bits (673), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 123/147 (83%), Positives = 134/147 (91%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGRDAP RFSSLIFGTHLTDV+ITG+NGTIDGQGSYWWDKFH Q K+TRPYMIEI+YS
Sbjct: 135 RGRDAPGPRFSSLIFGTHLTDVIITGNNGTIDGQGSYWWDKFHNKQLKITRPYMIEILYS 194
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
QIQISNLTL+NSPSWFVHP YSS+III+GLTILAPVDSPNTDGIDPDS +N RIED YI
Sbjct: 195 DQIQISNLTLINSPSWFVHPTYSSNIIIKGLTILAPVDSPNTDGIDPDSSTNVRIEDNYI 254
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
VSGDDCIA+KSGWD+YGIK G PS+ I
Sbjct: 255 VSGDDCIAIKSGWDQYGIKFGKPSKQI 281
>Medtr1g100060.1 | pectin lyase superfamily protein | HC |
chr1:45084624-45082095 | 20130731
Length = 516
Score = 258 bits (659), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 122/147 (82%), Positives = 132/147 (89%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGR+ P GRFSSLIFGT+L DV+ITG+NGTIDGQGS WWDKF K Q K+TRPYMIEIMYS
Sbjct: 178 RGREKPGGRFSSLIFGTNLIDVIITGNNGTIDGQGSTWWDKFQKKQLKITRPYMIEIMYS 237
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
QIQISNLTLVNSPSWFVHP+YSS+III GLTILAPVD PNTDGIDPDS +N IED YI
Sbjct: 238 DQIQISNLTLVNSPSWFVHPVYSSNIIINGLTILAPVDVPNTDGIDPDSSTNVLIEDNYI 297
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
VSGDDCIA+KSGWDEYGIKVG PSQ+I
Sbjct: 298 VSGDDCIAIKSGWDEYGIKVGKPSQNI 324
>Medtr8g098840.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:41331762-41334923 | 20130731
Length = 470
Score = 254 bits (650), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 115/147 (78%), Positives = 132/147 (89%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGRD GR+SSLIFGT+LTDVVITG+NGT+DGQG WW KFHKG+ TRPY+IEIMYS
Sbjct: 129 RGRDTQGGRYSSLIFGTNLTDVVITGNNGTLDGQGELWWQKFHKGKLTYTRPYLIEIMYS 188
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
IQISNLTLVNSPSW VHP+YSS+II+QG+TILAPV+SPNTDGI+PDSC+NTRIEDCYI
Sbjct: 189 DNIQISNLTLVNSPSWNVHPVYSSNIIVQGITILAPVNSPNTDGINPDSCTNTRIEDCYI 248
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
VSGDDC+AVKSGWDEYGI GMP++ +
Sbjct: 249 VSGDDCVAVKSGWDEYGIAYGMPTKQL 275
>Medtr1g099850.1 | pectin lyase superfamily protein | HC |
chr1:45068986-45067030 | 20130731
Length = 475
Score = 253 bits (647), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 123/153 (80%), Positives = 132/153 (86%)
Query: 14 FSTSNQRGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYM 73
F S R +DAP GRFSSLIFGT+LTDVVITG+NGTIDGQGS WWDKF K Q K+TRPYM
Sbjct: 134 FLPSYGREKDAPDGRFSSLIFGTNLTDVVITGNNGTIDGQGSTWWDKFQKKQLKITRPYM 193
Query: 74 IEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTR 133
IEIMYS QIQISNLTL+NSP+WFVHPIYSS+III LTILAPVD PNTDGIDPDSC+N
Sbjct: 194 IEIMYSDQIQISNLTLINSPNWFVHPIYSSNIIINRLTILAPVDVPNTDGIDPDSCTNVL 253
Query: 134 IEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHI 166
IED YIVSGDDCIA+KSG D YGIKVG PSQ I
Sbjct: 254 IEDNYIVSGDDCIAIKSGLDGYGIKVGKPSQKI 286
>Medtr7g078680.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:29762570-29765948 | 20130731
Length = 483
Score = 234 bits (598), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/147 (74%), Positives = 134/147 (91%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGRDAPAGRF SLIFGT+LTDV++TG NGTIDGQG++WW +FH+ + K TRPY+IE+M+S
Sbjct: 140 RGRDAPAGRFRSLIFGTNLTDVIVTGGNGTIDGQGAFWWQQFHRKKLKYTRPYLIELMFS 199
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
IQISNLTL+NSPSW VHP+YSS+IIIQG+TI+AP+ SPNTDGI+PDSC+NT+IEDCYI
Sbjct: 200 DSIQISNLTLLNSPSWNVHPVYSSNIIIQGITIIAPISSPNTDGINPDSCTNTKIEDCYI 259
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
VSGDDC+AVKSGWDEYGIK G P++ +
Sbjct: 260 VSGDDCVAVKSGWDEYGIKFGWPTKQL 286
>Medtr8g028725.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr8:11065754-11061041 | 20130731
Length = 479
Score = 226 bits (577), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 106/147 (72%), Positives = 132/147 (89%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGRDA AGR +SLIFGT+LTDV++TG NGTIDGQGS+WW +FH + K TRPY+IE+M+S
Sbjct: 140 RGRDAAAGRHTSLIFGTNLTDVIVTGDNGTIDGQGSFWWQQFHNKKLKYTRPYLIELMFS 199
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
IQISNLTL++SPSW +HP+YSS+III+G+TI+AP+ SPNTDGI+PDSC+NT+IEDCYI
Sbjct: 200 DNIQISNLTLLDSPSWNIHPVYSSNIIIKGITIIAPIRSPNTDGINPDSCTNTKIEDCYI 259
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
VSGDDC+AVKSGWDEYGIK G P++ +
Sbjct: 260 VSGDDCVAVKSGWDEYGIKFGWPTKQL 286
>Medtr7g110710.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 111/147 (75%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGR+ P GR SLI+G +LTDV+ITG+ G IDGQGS WW F TRP+++E+M S
Sbjct: 128 RGRELPGGRHRSLIYGCNLTDVIITGNEGIIDGQGSIWWSMFRNKTLDYTRPHLVELMNS 187
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
+++ ISNLT +NSP W +HP+Y S + +Q +TILAP+DSPNTDGIDPDS + IEDCYI
Sbjct: 188 TRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYI 247
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
+GDD IA+KSGWDEYGI G PS +I
Sbjct: 248 STGDDLIAIKSGWDEYGIAFGRPSTNI 274
>Medtr7g110710.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45367344-45371719 | 20130731
Length = 466
Score = 194 bits (494), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 111/147 (75%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGR+ P GR SLI+G +LTDV+ITG+ G IDGQGS WW F TRP+++E+M S
Sbjct: 128 RGRELPGGRHRSLIYGCNLTDVIITGNEGIIDGQGSIWWSMFRNKTLDYTRPHLVELMNS 187
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
+++ ISNLT +NSP W +HP+Y S + +Q +TILAP+DSPNTDGIDPDS + IEDCYI
Sbjct: 188 TRVLISNLTFLNSPFWTIHPVYCSQVTVQNVTILAPLDSPNTDGIDPDSSDDVCIEDCYI 247
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
+GDD IA+KSGWDEYGI G PS +I
Sbjct: 248 STGDDLIAIKSGWDEYGIAFGRPSTNI 274
>Medtr1g086030.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38488435-38484789 | 20130731
Length = 510
Score = 192 bits (488), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 86/147 (58%), Positives = 111/147 (75%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGR+ P GR SLI+G +LTDV+ITG+NGTIDGQGS WW KF TRP+++E++ S
Sbjct: 167 RGRELPGGRHRSLIYGCNLTDVIITGNNGTIDGQGSIWWSKFRNKTLDHTRPHLVELINS 226
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
+++ ISN T +NSP W +HP+Y S++ +Q +TI+ P SPNTDGIDPDS N IEDCYI
Sbjct: 227 TEVLISNATFLNSPFWTIHPVYCSNVTVQNVTIIVPFGSPNTDGIDPDSSDNVCIEDCYI 286
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
+GDD I++KSGWDEYGI G PS +I
Sbjct: 287 STGDDLISIKSGWDEYGISFGRPSTNI 313
>Medtr1g086030.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38486723-38484669 | 20130731
Length = 406
Score = 192 bits (487), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 86/147 (58%), Positives = 111/147 (75%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGR+ P GR SLI+G +LTDV+ITG+NGTIDGQGS WW KF TRP+++E++ S
Sbjct: 63 RGRELPGGRHRSLIYGCNLTDVIITGNNGTIDGQGSIWWSKFRNKTLDHTRPHLVELINS 122
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
+++ ISN T +NSP W +HP+Y S++ +Q +TI+ P SPNTDGIDPDS N IEDCYI
Sbjct: 123 TEVLISNATFLNSPFWTIHPVYCSNVTVQNVTIIVPFGSPNTDGIDPDSSDNVCIEDCYI 182
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
+GDD I++KSGWDEYGI G PS +I
Sbjct: 183 STGDDLISIKSGWDEYGISFGRPSTNI 209
>Medtr4g124980.1 | pectin lyase superfamily protein | HC |
chr4:51842179-51838098 | 20130731
Length = 492
Score = 177 bits (450), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 109/147 (74%), Gaps = 1/147 (0%)
Query: 21 GRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSS 80
GR+ P R+ SLI G +L DVVITGHNGTI+GQG WW KF + + TR +++IM+SS
Sbjct: 160 GRERPGPRYGSLIHGQNLKDVVITGHNGTINGQGQAWWKKFRQKRLNYTRGPLLQIMWSS 219
Query: 81 QIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPV-DSPNTDGIDPDSCSNTRIEDCYI 139
I I+++TL +SP W +HP ++ I+G+TILAPV ++PNTDGIDPDSC + IEDCYI
Sbjct: 220 DIVITDITLRDSPFWTLHPYDCKNLTIKGVTILAPVFEAPNTDGIDPDSCEDMLIEDCYI 279
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
GDD IA+KSGWD+YGI G PS +I
Sbjct: 280 SVGDDAIAIKSGWDQYGIAYGRPSMNI 306
>Medtr3g449590.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:16895715-16889169 | 20130731
Length = 451
Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 104/147 (70%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGR+ P GR+ S I G + DV+ITG NGTIDGQG WW+ + + + TRP ++E + S
Sbjct: 132 RGRELPGGRYISFIHGDGVRDVIITGENGTIDGQGDVWWNMWRQRTLQFTRPNLVEFLNS 191
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
I ISN+ NSP W +HP+Y S+++++ +TILAP DSPNTDGIDPDS SN IED YI
Sbjct: 192 RNIIISNVIFKNSPFWNIHPVYCSNVVVRYVTILAPRDSPNTDGIDPDSSSNVCIEDSYI 251
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
+GDD +AVKSGWD YGI G PS I
Sbjct: 252 STGDDLVAVKSGWDAYGISYGRPSNDI 278
>Medtr2g042740.1 | pectin lyase superfamily protein | HC |
chr2:18636698-18641564 | 20130731
Length = 474
Score = 173 bits (438), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/147 (57%), Positives = 105/147 (71%), Gaps = 1/147 (0%)
Query: 21 GRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSS 80
GR+ P R+SSLI G +L DVVITGHNGTI+GQG WW K TR +++IMYSS
Sbjct: 142 GREHPGPRYSSLIHGQNLKDVVITGHNGTINGQGQTWWTKHLHKLLNYTRGPLVQIMYSS 201
Query: 81 QIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPV-DSPNTDGIDPDSCSNTRIEDCYI 139
I ISN+TL +SP W +HP ++ I+ +TILAPV +PNTDGIDPDSC + IEDCYI
Sbjct: 202 DIVISNITLRDSPFWTLHPYDCKNVTIKNVTILAPVYHAPNTDGIDPDSCEDMLIEDCYI 261
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
GDD IA+KSGWD+YGI PS++I
Sbjct: 262 SVGDDAIAIKSGWDQYGIAYAKPSKNI 288
>Medtr2g435340.3 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610594-13606829 | 20130731
Length = 387
Score = 163 bits (413), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 107/161 (66%)
Query: 6 PSRLNNTHFSTSNQRGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQ 65
PS N S RG+D P GR+ SLI G L DVVITG+NGTIDG G WWD +
Sbjct: 43 PSHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMVWWDSYKSHS 102
Query: 66 FKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGID 125
+RP+++EI+ S + +SNLT +N+P++ +HP+Y S++ IQ ++I P +SP T GI
Sbjct: 103 LNHSRPHLVEIISSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPPESPYTAGIV 162
Query: 126 PDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHI 166
PDS +N IEDC++ G D I++KSGWD+YGI G PS+ +
Sbjct: 163 PDSSNNVCIEDCFVSIGFDAISLKSGWDQYGINYGRPSEKV 203
>Medtr2g435340.2 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610594-13606829 | 20130731
Length = 387
Score = 163 bits (413), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 107/161 (66%)
Query: 6 PSRLNNTHFSTSNQRGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQ 65
PS N S RG+D P GR+ SLI G L DVVITG+NGTIDG G WWD +
Sbjct: 43 PSHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMVWWDSYKSHS 102
Query: 66 FKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGID 125
+RP+++EI+ S + +SNLT +N+P++ +HP+Y S++ IQ ++I P +SP T GI
Sbjct: 103 LNHSRPHLVEIISSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPPESPYTAGIV 162
Query: 126 PDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHI 166
PDS +N IEDC++ G D I++KSGWD+YGI G PS+ +
Sbjct: 163 PDSSNNVCIEDCFVSIGFDAISLKSGWDQYGINYGRPSEKV 203
>Medtr2g435340.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:13610605-13606670 | 20130731
Length = 452
Score = 163 bits (413), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 107/161 (66%)
Query: 6 PSRLNNTHFSTSNQRGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQ 65
PS N S RG+D P GR+ SLI G L DVVITG+NGTIDG G WWD +
Sbjct: 108 PSHWNIIEALPSYGRGKDVPDGRYKSLINGNQLEDVVITGNNGTIDGNGMVWWDSYKSHS 167
Query: 66 FKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGID 125
+RP+++EI+ S + +SNLT +N+P++ +HP+Y S++ IQ ++I P +SP T GI
Sbjct: 168 LNHSRPHLVEIISSDFVVVSNLTFLNAPAYSIHPVYCSNVHIQNISISTPPESPYTAGIV 227
Query: 126 PDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHI 166
PDS +N IEDC++ G D I++KSGWD+YGI G PS+ +
Sbjct: 228 PDSSNNVCIEDCFVSIGFDAISLKSGWDQYGINYGRPSEKV 268
>Medtr3g096330.1 | glycoside hydrolase family 28 protein | HC |
chr3:44026955-44022720 | 20130731
Length = 775
Score = 162 bits (411), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 100/136 (73%)
Query: 31 SLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLV 90
SLI + +VVITG NGT+DGQG WW+ + TR +++E+M S + +SNLT
Sbjct: 172 SLIHANGVRNVVITGENGTVDGQGRMWWELWWNRTLVHTRGHLLELMNSENVLVSNLTFR 231
Query: 91 NSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKS 150
NSP W +HP+Y S+++I+G+TILAP+++PNTDGIDPDS +N IED YI SGDD +A+KS
Sbjct: 232 NSPFWTIHPVYCSNVVIKGMTILAPLNAPNTDGIDPDSSTNVCIEDNYIESGDDLVAIKS 291
Query: 151 GWDEYGIKVGMPSQHI 166
GWD+YGI V PS +I
Sbjct: 292 GWDQYGIAVAKPSTNI 307
>Medtr5g090160.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr5:39275416-39270733 | 20130731
Length = 450
Score = 162 bits (410), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 97/138 (70%)
Query: 29 FSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLT 88
+ S I G L DVVITG NGTIDGQG WW+ + K + TRP ++E + S I ISN+
Sbjct: 139 YMSFIHGDGLQDVVITGENGTIDGQGDVWWNMWRKRTLQFTRPNLVEFVNSKDIIISNVI 198
Query: 89 LVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAV 148
+SP W +HP+Y S+++I+ TILAP DSPNTDGIDPDS SN IED YI +GDD +AV
Sbjct: 199 FKDSPFWNIHPVYCSNVVIRFATILAPRDSPNTDGIDPDSSSNVCIEDSYISTGDDLVAV 258
Query: 149 KSGWDEYGIKVGMPSQHI 166
KSGWDEYGI G S +I
Sbjct: 259 KSGWDEYGIAYGRSSSNI 276
>Medtr4g120730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr4:49981535-49985560 | 20130731
Length = 459
Score = 160 bits (404), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 103/147 (70%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RG + P GR+ SLI G L DVVITG+NGTIDG GS WW+ F +RP+++E++ S
Sbjct: 125 RGLEVPGGRYQSLINGYMLQDVVITGNNGTIDGMGSTWWESFSSHSLNYSRPHLVELVAS 184
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
+ + +SNLT +N+P++ +HP+Y ++ I ++I AP +SP T GI PDS + IEDC I
Sbjct: 185 TDVVVSNLTFLNAPAYNIHPVYCRNVHIHNISIFAPPESPYTVGIVPDSSDHVCIEDCTI 244
Query: 140 VSGDDCIAVKSGWDEYGIKVGMPSQHI 166
+G D IA+KSGWDEYGI G P++++
Sbjct: 245 ATGYDAIALKSGWDEYGIAYGRPTENV 271
>Medtr2g083670.1 | pectin lyase superfamily protein | HC |
chr2:35113079-35111056 | 20130731
Length = 236
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 72/120 (60%), Gaps = 15/120 (12%)
Query: 20 RGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYS 79
RGR+ P G SLI+G +LTDV+ITG+NGTIDGQ S WW IE M S
Sbjct: 125 RGRELPGGWHRSLIYGCNLTDVIITGNNGTIDGQRSIWW---------------IESMNS 169
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
+ ISN+T +NSP W +H +Y S + +Q +TILAP PNTDGID S ++ YI
Sbjct: 170 KNVLISNVTFLNSPFWTMHHVYCSHVTVQNVTILAPFGLPNTDGIDSYSLIMYALKTGYI 229
>Medtr5g043350.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr5:19058555-19056081 | 20130731
Length = 400
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 48 GTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIII 107
GTIDGQG+ WW K+H G RP + + + ISNL +NSP + + I
Sbjct: 131 GTIDGQGAPWWKKYHDGDSN--RPTAFQFIGCESLTISNLNHINSPRNHISIDSCKNASI 188
Query: 108 QGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
L I+AP +SPNTDGID S SN I + I +GDDCIA+ SG
Sbjct: 189 SNLQIIAPENSPNTDGIDIASSSNIIINNLSIKTGDDCIAINSG 232
>Medtr3g084380.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38095209-38097944 | 20130731
Length = 396
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 36 THLTDVVITGHNGTIDGQGSYWWDKF-HKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPS 94
+ ++ +V+ G G IDGQGS WWDKF KGQ K RP + + + +SNL +NSP
Sbjct: 113 SKISGLVVNGE-GNIDGQGSPWWDKFGGKGQEKF-RPTALRFLDCQALTLSNLNHMNSPK 170
Query: 95 WFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ + I + I AP SPNTDGID +N I + I +GDDCIA+ +G
Sbjct: 171 NHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNIAIMNSTIETGDDCIAINNG 227
>Medtr4g084050.1 | polygalacturonase | LC | chr4:32729268-32731175 |
20130731
Length = 394
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 6/116 (5%)
Query: 36 THLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSW 95
+++ ++I G GT+DGQG WW+ + G RP ++I+ +++ L +NSP
Sbjct: 114 SNINGLIING-GGTVDGQGDSWWN--NNGHI---RPTALKILECDNLKLGPLKHINSPRN 167
Query: 96 FVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ + +D +I L I+AP DSPNTDGID + +N ++ I +GDDCIA+ +G
Sbjct: 168 HISIVGCNDALISNLHIIAPKDSPNTDGIDISTSTNISVQHSIISTGDDCIAINNG 223
>Medtr1g012390.1 | polygalacturonase | HC | chr1:2451099-2447667 |
20130731
Length = 397
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 48 GTIDGQGSYWWDKFH--KGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDI 105
G IDG+G WW + KG RP + +Q+S LT +N P+ V+ ++S D+
Sbjct: 126 GVIDGRGEAWWSNLNGTKGCAANARPTALLFERCDGLQLSGLTHINGPAMHVYVVHSQDV 185
Query: 106 IIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
I + I + DS NTDGID + I D I SGDDCIA+K G
Sbjct: 186 TISHINISSSKDSYNTDGIDISNSIRVNIHDSIIQSGDDCIAIKGG 231
>Medtr3g084360.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:38089185-38091032 | 20130731
Length = 391
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Query: 36 THLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSW 95
+H+ ++I+G GT DGQG+ WW ++ RP ++ + +++ L ++SP
Sbjct: 115 SHIKGLIISGE-GTFDGQGASWWKNYND----HGRPTALQFLGCDNLKLGPLRHIDSPKN 169
Query: 96 FVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ + + +I L I+AP +SPNTDGID +N IE I +GDDCIA+ SG
Sbjct: 170 HISIVDCNGALISHLHIIAPENSPNTDGIDISRSTNIIIEHSTISTGDDCIAINSG 225
>Medtr2g042750.1 | hypothetical protein | LC |
chr2:18643705-18646214 | 20130731
Length = 294
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 27/109 (24%)
Query: 21 GRDAPAGRFSSLIFGTHLTDVVI--TGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMY 78
GR+ P R+SSLI G +LT+V I HNGTIDGQG WW K+ + TR +++IM+
Sbjct: 198 GREHPGPRYSSLIHGQNLTEVRIFLPWHNGTIDGQGRTWWTKYRQNLLNHTRGPLVQIMW 257
Query: 79 SSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPV-DSPNTDGIDP 126
S + YS ++ TILAP+ D+PNTDGIDP
Sbjct: 258 SKR-------------------YSKNV-----TILAPLDDAPNTDGIDP 282
>Medtr3g054320.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr3:21549576-21552288 | 20130731
Length = 401
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 36 THLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSW 95
+ + D+++ G G IDGQGS WW ++ Q RP ++ + +++++LT NSP
Sbjct: 121 SEINDLIVNGK-GDIDGQGSSWWLRYPGDQ---DRPTALQFLGCQDLKLNDLTHRNSPRN 176
Query: 96 FVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ I L I+A SPNTDGID SN I + +I +GDDCIA+ SG
Sbjct: 177 HISIDTCKGAFISNLHIIAAPTSPNTDGIDISQSSNVFITNSFIGTGDDCIAINSG 232
>Medtr6g048610.1 | polygalacturonase | HC | chr6:17584998-17584221 |
20130731
Length = 163
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 124 IDPDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIKVGMPSQHI 166
++ S +N RIEDC IVSGDDC+A+KSGW+EYGI+ GMPSQHI
Sbjct: 20 VEKYSSTNVRIEDCQIVSGDDCVAIKSGWNEYGIQFGMPSQHI 62
>Medtr6g028080.1 | polygalacturonase | HC | chr6:9978081-9985497 |
20130731
Length = 400
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%)
Query: 48 GTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIII 107
G IDG+G+ WWD + + P + + + LT +NSP + I
Sbjct: 133 GIIDGKGAQWWDCHSNIKCEKENPTALHFHACENLILRELTHINSPRNHISLNACHGSHI 192
Query: 108 QGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
L I+AP +SPNTDGID SN IE+ I +GDDCIA+ G
Sbjct: 193 SKLHIIAPNESPNTDGIDIAESSNIIIENSKIETGDDCIAINHG 236
>Medtr5g033680.1 | polygalacturonase | HC | chr5:14519678-14516292 |
20130731
Length = 470
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Query: 38 LTDVVITGHNGTIDGQGSYWW--------DKFHKGQFKLTRPYMIEIMYSSQIQISNLTL 89
+ + I G+ GTIDGQGS WW K H Q +P I S+ ++I ++ +
Sbjct: 147 VQNFTIKGY-GTIDGQGSNWWSSSKLYDIQKTHSKQIPSMKPTAIRFYSSNFVKIRDIKI 205
Query: 90 VNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVK 149
NSP + S I + +TI +P +SPNTDGI + + I+ I +GDDC++++
Sbjct: 206 KNSPLCHLKFDNSKGIKVDNITISSPENSPNTDGIHLQNTQDVEIQHSNIGTGDDCVSIQ 265
Query: 150 SG 151
+G
Sbjct: 266 TG 267
>Medtr1g086390.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:38659765-38662894 | 20130731
Length = 477
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 47 NGTIDGQGSYWWD---KFHKGQFKLT------RPYMIEIMYSSQIQISNLTLVNSPSWFV 97
+GTIDG+G WWD K HKG T P I SS + + L + NSP +
Sbjct: 180 SGTIDGRGQKWWDLPCKPHKGPNGTTLPGPCDSPVAIRFFMSSNLTVQGLRIKNSPQFHF 239
Query: 98 HPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGI 157
+ ++ + I AP SPNTDGI ++ ++ +I + + +GDDC+++ SG + I
Sbjct: 240 RFDGCQSVHVESIFITAPALSPNTDGIHIENTNDVKIYNSVVSNGDDCVSIGSGCYDVDI 299
Query: 158 K 158
K
Sbjct: 300 K 300
>Medtr8g065030.1 | pectin lyase superfamily protein | HC |
chr8:27313786-27310073 | 20130731
Length = 461
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 36 THLTDVVITGHNGTIDGQGSYWWD---KFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNS 92
+ L V G +G IDG GS WW K +K P + I SS I++ LT+ NS
Sbjct: 151 SKLKKAVFQG-SGVIDGSGSKWWAASCKKNKTNPCKGAPTALTIDTSSSIKVKGLTIQNS 209
Query: 93 PSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAV 148
+ I G+ + +P DSPNTDGI +N ++DC I +GDDCI++
Sbjct: 210 QQMHFTISRCDSVRILGVKVASPGDSPNTDGIHISESTNVIVQDCKIGTGDDCISI 265
>Medtr8g008765.1 | polygalacturonase | LC | chr8:1861927-1866353 |
20130731
Length = 346
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 48 GTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIII 107
G +DG GS WW+ + RP + + + +SNL + NSPS V +
Sbjct: 128 GGLDGDGSTWWESGGE------RPGALLFHSCNDLSVSNLRITNSPSSHVSINMCNRTTF 181
Query: 108 QGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
++I +P SPNTDG D ++ RIE+ I SGDDCIAV G
Sbjct: 182 SHVSINSPATSPNTDGFDISFSTDIRIENSNIKSGDDCIAVNGG 225
>Medtr8g008700.1 | polygalacturonase | LC | chr8:1829561-1832039 |
20130731
Length = 292
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 48 GTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIII 107
G +DG GS WW+ + RP + + + +SNL + NSPS V +
Sbjct: 51 GGLDGDGSTWWESGGE------RPGALLFHSCNDLSVSNLRITNSPSSHVSINMCNRTTF 104
Query: 108 QGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
++I +P SPNTDG D ++ RIE+ I SGDDCIAV G
Sbjct: 105 SHVSINSPATSPNTDGFDISFSTDIRIENSNIKSGDDCIAVNGG 148
>Medtr1g052315.1 | endo polygalacturonase | HC |
chr1:21186740-21183250 | 20130731
Length = 449
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 48 GTIDGQGSYWWDKFHKGQFKL---TRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSD 104
GTI G G+ WW K KL P + + + + + +L + N V S++
Sbjct: 160 GTIHGNGNIWWQNSCKTNKKLPCKEAPTALTLYKCNNLVVEDLNVKNGQQIHVQFQNSAN 219
Query: 105 IIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ + GLT+ AP DSPNTDGI + N +I + I +GDDCI++ +G
Sbjct: 220 VRVSGLTVTAPEDSPNTDGIHVTNTQNIQISNSIIGTGDDCISIVNG 266
>Medtr7g092470.1 | exo-polyalpha-D-galacturonosidase-like protein |
HC | chr7:36655367-36649364 | 20130731
Length = 482
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 32 LIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLT-------------RPYMIEIMY 78
++ + TDV I G G +DGQ + ++++ + + RP +I +
Sbjct: 129 VVLAENATDVGIAG-GGVVDGQAEKFVVRYNERKNVMVSWNQTGDCLGDECRPRLIGFLG 187
Query: 79 SSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCY 138
+++ N+TL W +H + S +I IQ + I ++ PN DGID + +NT I C+
Sbjct: 188 CKNVKVFNVTLNQPAYWCLHLVRSENITIQDIAIYGDLNIPNNDGIDIEDSNNTVITRCH 247
Query: 139 IVSGDDCIAVKS 150
I +GDD I KS
Sbjct: 248 IDTGDDAICPKS 259
>Medtr7g110050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr7:45103855-45101037 | 20130731
Length = 462
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 48 GTIDGQGSYWWD---KFHKGQFKLT-----RPYMIEIMYSSQIQISNLTLVNSPSWFVHP 99
G+IDG+G WWD K HKG P I SS + + L + NSP +
Sbjct: 167 GSIDGRGQKWWDLPCKPHKGSNGTALGTCDSPIAIRFFMSSNLTVKGLKVKNSPQFNFRF 226
Query: 100 IYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGIK 158
+++ I+ + I AP SPNTDGI + ++ +I + I +GDDC+++ +G + IK
Sbjct: 227 DACNNVHIESIYITAPKISPNTDGIHLEYANDVKIYNSVISNGDDCVSIGTGSYDVDIK 285
>Medtr2g103650.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr2:44629212-44625414 | 20130731
Length = 404
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 35 GTHLTDVVITGHNGTIDGQGSYWWDKFHKGQ----FKLTRPYMIEIMYSSQIQISNLTLV 90
G + +I GT+DG+GS WW + G P I + + QI T +
Sbjct: 115 GFSFVNGLIISGKGTVDGRGSMWWKQPCIGNPPPGTSCRPPTAITLNRCYRFQIKGYTSI 174
Query: 91 NSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKS 150
N + II + ++AP +SPNTDGID + + ++ + +I +GDDCIA+ +
Sbjct: 175 NPARSHITLTSCKKGIISNIRLIAPGESPNTDGIDISASRDIQVLNSFIATGDDCIAISA 234
Query: 151 G 151
G
Sbjct: 235 G 235
>Medtr6g005630.1 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 425
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 36 THLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSW 95
T L + I G G IDGQGS WW+ K T+P + S + +S +T+ NS
Sbjct: 131 TKLNKITIKGK-GVIDGQGSVWWNDSEK--LPKTKPTALRFYGSDGVSVSGITIQNSQQT 187
Query: 96 FVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ +++ + +T +P DSPNTDGI + + I + GDDC+++++G
Sbjct: 188 HLKFDSCTNVQVFDITTSSPGDSPNTDGIHLQNSQDVVISGSTLSCGDDCVSIQTG 243
>Medtr4g094715.1 | pectin lyase superfamily protein | HC |
chr4:38832640-38835379 | 20130731
Length = 461
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 48 GTIDGQGSYWWD---KFHKGQFKLT------RPYMIEIMYSSQIQISNLTLVNSPSWFVH 98
GTI+G G WWD K H+G T P MI SS + ++ L + NSP + H
Sbjct: 163 GTIEGNGDQWWDLPCKPHRGPDGKTLSGPCGSPAMIRFFMSSNLYVNGLKIENSPQF--H 220
Query: 99 PIYS--SDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
I++ ++I L+I AP SPNTDGI ++ + I + I +GDDCI++ G
Sbjct: 221 MIFNGCQGVMINMLSISAPKLSPNTDGIHVENSKDVGIYNSLISNGDDCISIGPG 275
>Medtr8g010080.1 | polygalacturonase | LC | chr8:2548763-2551323 |
20130731
Length = 388
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 48 GTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIII 107
G++ G G WW + +RP M+ + + + NL ++NSP V +
Sbjct: 127 GSVLGDGPTWWQ-----CPRCSRPTMLHFHSCNDLNVRNLRILNSPRSHVSVNMCNHATF 181
Query: 108 QGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
++I +P SPNTDG D +N I+D I SGDDCIAV G
Sbjct: 182 SYISISSPATSPNTDGFDISHSNNILIQDSNIKSGDDCIAVNGG 225
>Medtr2g103410.2 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 333
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 48 GTIDGQGSYWWD---KFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSD 104
G IDG G WW K + L P + +++ NLT++NS +
Sbjct: 157 GRIDGMGQEWWSRSCKINTTNPCLPAPTALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMR 216
Query: 105 IIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAV 148
++ L +LAP SPNTDGI + I D I +GDDCI++
Sbjct: 217 VVASRLKVLAPASSPNTDGIHISATKGVEIRDSLIRTGDDCISI 260
>Medtr2g103410.1 | polygalacturonase | HC | chr2:44519609-44523183 |
20130731
Length = 451
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 48 GTIDGQGSYWWD---KFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSD 104
G IDG G WW K + L P + +++ NLT++NS +
Sbjct: 157 GRIDGMGQEWWSRSCKINTTNPCLPAPTALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMR 216
Query: 105 IIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAV 148
++ L +LAP SPNTDGI + I D I +GDDCI++
Sbjct: 217 VVASRLKVLAPASSPNTDGIHISATKGVEIRDSLIRTGDDCISI 260
>Medtr7g091840.1 | endo polygalacturonase | HC |
chr7:36349369-36347147 | 20130731
Length = 384
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%)
Query: 32 LIFGTHLTDVVITGHNGTIDGQGSYWWD---KFHKGQFKLTRPYMIEIMYSSQIQISNLT 88
L+F + +V+ G GT+DG+G+ WW+ K +K + P + + + NL
Sbjct: 149 LVFA-KVQQLVVNG-GGTLDGKGTIWWENSCKRNKNKPCKDAPTALTFANCEDLIVENLK 206
Query: 89 LVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAV 148
+ N+ + S ++ GL + +P DSPNTDGI + N +I +GDDCI++
Sbjct: 207 IRNAQQIHISFQDSVNVTASGLIVASPEDSPNTDGIHVTNTQNIKISSSIAAAGDDCISI 266
Query: 149 KSG 151
G
Sbjct: 267 VDG 269
>Medtr2g049400.1 | pectin lyase superfamily protein | LC |
chr2:21772816-21776116 | 20130731
Length = 391
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 56/106 (52%)
Query: 46 HNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDI 105
+ GT DG+G+ +W G+ I +S + +S LT +NS + + + ++
Sbjct: 120 YGGTFDGKGAGYWRCRKAGRSCPAAARSISFSWSKNVLVSGLTSLNSKAIHIAVDHCKNV 179
Query: 106 IIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+I+ + I AP SPNTDGI+ + I I++GDDCI++ G
Sbjct: 180 VIKDVKIRAPSRSPNTDGINVQFSTGVTISHSTIMTGDDCISINQG 225
>Medtr8g077320.1 | pectin lyase superfamily protein | LC |
chr8:32921813-32926670 | 20130731
Length = 364
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 48 GTIDGQGSYWWDKFHKGQFK-LTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDII 106
G I+G GS WW Q K RP ++ + + + N+ + NSP +
Sbjct: 110 GRINGHGSTWW------QCKSCPRPRILSFYACNDLSVRNVRITNSPGAHGTINGCNRAK 163
Query: 107 IQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
I L + +P SPNTDG D S N IED I +GDDCIA+ G
Sbjct: 164 ISNLDVQSPSHSPNTDGFDISSSKNILIEDSTIRTGDDCIAINGG 208
>Medtr8g010070.1 | polygalacturonase | LC | chr8:2539644-2543850 |
20130731
Length = 390
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 41 VVITGH-NGTIDGQGSYWWDKFHKGQFK-LTRPYMIEIMYSSQIQISNLTLVNSPSWFVH 98
+ I GH G +DG GS WW Q K RP + + +SNL++ NSP V
Sbjct: 121 LTINGHGRGVLDGDGSTWW------QCKSCDRPGVFLFHSCKGLNVSNLSITNSPRSHVA 174
Query: 99 PIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ ++I +P SPNTDG D ++ I D I SGDDCIA+ G
Sbjct: 175 VNMCNGATFSNISINSPGTSPNTDGFDIALSTHIVIHDSNIKSGDDCIAINGG 227
>Medtr8g010050.1 | pectin lyase superfamily protein | LC |
chr8:2530574-2534406 | 20130731
Length = 356
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 48 GTIDGQGSYWWDKFHKGQFK-LTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDII 106
G +DG GS WW Q K RP + + +SNL++ NSP V +
Sbjct: 129 GVLDGDGSTWW------QCKSCARPGVFLFHSCKGLNVSNLSITNSPRSHVAVNMCNGAT 182
Query: 107 IQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
++I +P SPNTDG D ++ I D I SGDDCIAV G
Sbjct: 183 FSNISINSPGTSPNTDGFDIALSTHIVIHDSNIKSGDDCIAVNGG 227
>Medtr2g060350.1 | polygalacturonase | HC | chr2:24855141-24858654 |
20130731
Length = 444
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 48 GTIDGQGSYWWD---KFHKGQFKLT---RPYMIEIMYSSQIQISNLTLVNSPSWFVHPIY 101
GT +G G WW+ K+ RP + +++ NL +S V
Sbjct: 168 GTFNGNGKKWWENSCKYSNNNLPCNDEPRPTAVTFYDCKNLKVKNLRFKDSQQMHVVFER 227
Query: 102 SSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
++ + L + AP DSPNTDGI N I +C I +GDDCI++ SG
Sbjct: 228 CFNVFVSNLIVRAPEDSPNTDGIHVAETQNIDIINCDIGTGDDCISIVSG 277
>Medtr8g010090.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr8:2553377-2556933 | 20130731
Length = 389
Score = 60.1 bits (144), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 37 HLTDVVITGHN-GTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSW 95
++ ++ I G+N G G G WW RP M+ + + + NL ++NSP
Sbjct: 116 YVDELTIDGNNKGGFHGGGPTWWQ-----CPTCDRPVMLFFHSCNGLNVRNLRILNSPRS 170
Query: 96 FVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
V + ++I + SPNTDG D SN IE+ I SGDDCIA+ SG
Sbjct: 171 HVAVTMCNHSTFSHISINSAATSPNTDGFDISRSSNVLIENSMIRSGDDCIALNSG 226
>Medtr1g013740.1 | polygalacturonase | HC | chr1:3276100-3272148 |
20130731
Length = 390
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 27 GRFSSLIFGTHLTDV--VITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQI 84
GR SL + H ++ +I +G I+G G WW K ++ +QI
Sbjct: 112 GRECSL-YWIHFFNIHGLILDGSGVINGNGEDWWSK------------ALQFDKCDGLQI 158
Query: 85 SNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDD 144
+ LT +N P + S DI I + I +P +S NTDGID + D I SGDD
Sbjct: 159 TGLTHINGPGPHIAVTDSQDITISHIHINSPKESHNTDGIDLTRAIRVNVHDIPIRSGDD 218
Query: 145 CIAVKSG 151
CIA+K G
Sbjct: 219 CIAIKGG 225
>Medtr2g032710.2 | polygalacturonase plant-like protein | HC |
chr2:12319301-12315408 | 20130731
Length = 463
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 48 GTIDGQGSYWWD---KFHKGQFKLT------RPYMIEIMYSSQIQISNLTLVNSPSWFVH 98
G I+G G WWD K H+ T P MI SS + + L + NSP + V
Sbjct: 165 GIIEGNGEQWWDLPCKPHRSPDGKTVSGPCVSPTMIRFFMSSNLVLRGLKIQNSPQFHVK 224
Query: 99 PIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
++I L+I AP SPNTDGI + + I + I +GDDCI++ G
Sbjct: 225 FDGCQGVLIDELSISAPKLSPNTDGIHLGNTRDVGIYNSLISNGDDCISIGPG 277
>Medtr2g032710.1 | polygalacturonase plant-like protein | HC |
chr2:12322300-12315408 | 20130731
Length = 463
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 48 GTIDGQGSYWWD---KFHKGQFKLT------RPYMIEIMYSSQIQISNLTLVNSPSWFVH 98
G I+G G WWD K H+ T P MI SS + + L + NSP + V
Sbjct: 165 GIIEGNGEQWWDLPCKPHRSPDGKTVSGPCVSPTMIRFFMSSNLVLRGLKIQNSPQFHVK 224
Query: 99 PIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
++I L+I AP SPNTDGI + + I + I +GDDCI++ G
Sbjct: 225 FDGCQGVLIDELSISAPKLSPNTDGIHLGNTRDVGIYNSLISNGDDCISIGPG 277
>Medtr7g091850.1 | endo polygalacturonase | HC |
chr7:36360735-36353948 | 20130731
Length = 450
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 32 LIFGTHLTDVVITGHNGTIDGQGSYWWD---KFHKGQFKLTRPYMIEIMYSSQIQISNLT 88
L+F + +++ G GTIDG+G+ WW+ K +K + P + + + +LT
Sbjct: 158 LVF-VEVQQLLVNG-GGTIDGKGNIWWENSCKRNKKKPCKDAPTALTFDSCKDLIVEDLT 215
Query: 89 LVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAV 148
+ N+ V S+++ GL + +P +SPNTDGI + N +I I +GDDCI++
Sbjct: 216 IQNAQQIHVSFQDSTNVKASGLKVSSPGNSPNTDGIHITNTQNIKISSSIIGTGDDCISI 275
Query: 149 KSG 151
G
Sbjct: 276 VDG 278
>Medtr4g083660.1 | polygalacturonase | HC | chr4:32524282-32522029 |
20130731
Length = 374
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 37 HLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPY---MIEIMYSSQIQISNLTLVNSP 93
H+ V I G G +DGQG+ WD K K P +E S I IS LT +NS
Sbjct: 95 HVDGVSIRG--GLLDGQGTALWD--CKNSDKSNCPIGATTLEFSNSKNIMISGLTSMNSQ 150
Query: 94 SWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ + ++ +QG+ I+A +SPNTDGI S+ I + I +GDDCI++ G
Sbjct: 151 MFHIVFNGCENVKMQGVNIMAAGNSPNTDGIHVQMSSHVTIVNSKIRTGDDCISIGPG 208
>Medtr8g010110.1 | polygalacturonase | LC | chr8:2562133-2566759 |
20130731
Length = 389
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Query: 37 HLTDVVITGHN-GTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSW 95
++ ++ I G+N G G G WW RP M+ + + + NL ++NSP
Sbjct: 116 YVNELTIDGNNKGGFHGGGRTWWQ-----CPTCDRPKMLFFHSCNGLNVRNLRILNSPKS 170
Query: 96 FVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
V + ++I + SPNTDG D +N IE+ I SGDDCIAV G
Sbjct: 171 HVSVNMCNHSTFSHISINSAAASPNTDGFDISRSNNISIENSKIRSGDDCIAVNGG 226
>Medtr7g035415.1 | polygalacturonase | LC | chr7:13555483-13559381 |
20130731
Length = 334
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
Query: 37 HLTDVVITGHNGTIDGQGSYWWDKFHKGQFK-LTRPYMIEIMYSSQIQISNLTLVNSPSW 95
HLT + G G+I+G GS WW Q K +RP + S+ + + NL + N+P
Sbjct: 130 HLT--IDGGIGGSIEGYGSTWW------QCKTCSRPTALFFHSSNDLTVRNLRITNTPGA 181
Query: 96 FVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ + + +P +SPNTDG D N + D I +GDDCIAV G
Sbjct: 182 HIAINGCIGATFSQILVNSPGNSPNTDGFDISYSKNITVVDSTIATGDDCIAVNGG 237
>Medtr1g013730.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr1:3280656-3277876 | 20130731
Length = 382
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 48/104 (46%), Gaps = 12/104 (11%)
Query: 48 GTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIII 107
G I+G G W + ++ +QI+ LT +N P + I S DI I
Sbjct: 126 GVINGNGEGWESR------------ALQFDKCDGLQINGLTHINGPGAHIAVIDSQDITI 173
Query: 108 QGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ I +P S NTDGID I D I SGDDCIAVK G
Sbjct: 174 SHIHINSPKKSHNTDGIDLTRTIGVNIHDIQIESGDDCIAVKGG 217
>Medtr8g009810.1 | pectin lyase superfamily protein | HC |
chr8:2423952-2426973 | 20130731
Length = 400
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 48 GTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIII 107
G +DGQG+ WD + T + S+ I ++ +T +NS + + +++ +
Sbjct: 131 GILDGQGTSLWDCKRSSKSCPTGATNLRFSNSNNIVMNGVTSLNSQMFHIVIDRCNNVKV 190
Query: 108 QGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
QG+ + A +SPNTDGI S+ I + I +GDDCI++ SG
Sbjct: 191 QGVKVTAAGNSPNTDGIHVQLSSSVTILNSNIETGDDCISIGSG 234
>Medtr2g029170.1 | endo-polygalacturonase | HC |
chr2:10881421-10882932 | 20130731
Length = 361
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 7/107 (6%)
Query: 46 HNGTIDGQGSYWWDKFHKGQFKLTRPYMIEI----MYSSQIQISNLTLVNSPSWFVHPIY 101
H G +DG+G+ WD + G+ + P + S I I+ LT +NS + +
Sbjct: 89 HGGVLDGKGTSLWDCKNSGK---SCPMGAAVNTWNFNSDNIIITGLTSLNSQMFHIVIRE 145
Query: 102 SSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAV 148
++ + G+ I+AP +SPNTDGI S S+ I I +GDDCI++
Sbjct: 146 CRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITILKPRIRTGDDCISI 192
>Medtr5g034090.2 | polygalacturonase | HC | chr5:14734905-14738756 |
20130731
Length = 416
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 30/145 (20%)
Query: 36 THLTDVVITGHNGTIDGQGSYWWDKF-----------------------------HKGQF 66
T L + I G NG IDG+GS WW F +
Sbjct: 207 TKLEGITIQG-NGVIDGRGSVWWQDFPYDNPIDDEEKLIVPLNQTQKPPMPVQNEMGRKM 265
Query: 67 KLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDP 126
+P + S ++ +T+ NSP + + +++ ++I +P DSPNTDGI
Sbjct: 266 PSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHL 325
Query: 127 DSCSNTRIEDCYIVSGDDCIAVKSG 151
+ + I + GDDCI++++G
Sbjct: 326 QNSKDVLIHSSKLACGDDCISIQTG 350
>Medtr7g113910.1 | polygalacturonase | HC | chr7:46964803-46959130 |
20130731
Length = 376
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 48 GTIDGQGSYWWD---KFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSD 104
G IDG G WW K + P + +++ NLT+VNS +
Sbjct: 97 GRIDGMGQEWWSRSCKINTTNPCHPAPTSLTFHRCKSLKVRNLTVVNSQKMHIAFTRCMR 156
Query: 105 IIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAV 148
+++ L + AP SPNTDGI + I + +GDDCI++
Sbjct: 157 VVVSRLNVSAPSSSPNTDGIHISATKGIEISHSDVKTGDDCISI 200
>Medtr5g034090.1 | polygalacturonase | HC | chr5:14734905-14739416 |
20130731
Length = 534
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 30/145 (20%)
Query: 36 THLTDVVITGHNGTIDGQGSYWWDKFH-----KGQFKL---------------------- 68
T L + I G NG IDG+GS WW F + KL
Sbjct: 207 TKLEGITIQG-NGVIDGRGSVWWQDFPYDNPIDDEEKLIVPLNQTQKPPMPVQNEMGRKM 265
Query: 69 --TRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDP 126
+P + S ++ +T+ NSP + + +++ ++I +P DSPNTDGI
Sbjct: 266 PSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIHL 325
Query: 127 DSCSNTRIEDCYIVSGDDCIAVKSG 151
+ + I + GDDCI++++G
Sbjct: 326 QNSKDVLIHSSKLACGDDCISIQTG 350
>Medtr8g010040.1 | polygalacturonase | LC | chr8:2522127-2526378 |
20130731
Length = 388
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 54 GSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTIL 113
GS WW RP ++ + + + L + NSP + + I
Sbjct: 135 GSTWWS-----CISCLRPIVLSFHSCNDLSVRKLKITNSPGGHIAINGCYGAKFSNVVID 189
Query: 114 APVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+P SPNTDG D + N IED I +GDDCIA+ G
Sbjct: 190 SPAHSPNTDGFDISASKNIVIEDSTIQAGDDCIALNGG 227
>Medtr6g005630.2 | polygalacturonase | HC | chr6:863153-867302 |
20130731
Length = 402
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 36 THLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSW 95
T L + I G G IDGQGS WW+ K T+P + S + +S +T+ NS
Sbjct: 131 TKLNKITIKGK-GVIDGQGSVWWNDSEK--LPKTKPTALRFYGSDGVSVSGITIQNSQQT 187
Query: 96 FVHPIYSSDIIIQGLTILAPVDSPNTDGI 124
+ +++ + +T +P DSPNTDGI
Sbjct: 188 HLKFDSCTNVQVFDITTSSPGDSPNTDGI 216
>Medtr8g065010.1 | polygalacturonase plant-like protein | HC |
chr8:27299002-27295111 | 20130731
Length = 521
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 36/167 (21%)
Query: 15 STSNQRGRDAPAGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWW---------DKFHK-- 63
+ SN GR G L F T L I G NG DG+GS WW D K
Sbjct: 177 TNSNAWGR----GLLQWLDF-TKLVGFTIQG-NGIFDGRGSVWWQDTQYNDPLDDEEKLL 230
Query: 64 -------------------GQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSD 104
G+ +P I S ++ +T+ NSP + +
Sbjct: 231 VPLNNTIVSPPMQIESSLGGKMPSIKPTAIRFYGSINPTVTGITIQNSPQCHLKFDNCNG 290
Query: 105 IIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+++ +TI +P DSPNTDGI + + I + GDDCI++++G
Sbjct: 291 VLVHDVTISSPGDSPNTDGIHLQNSRDVLIYKSTMACGDDCISIQTG 337
>Medtr3g030540.1 | polygalacturonase | LC | chr3:9670728-9674889 |
20130731
Length = 437
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 4/118 (3%)
Query: 37 HLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLT---RPYMIEIMYSSQIQISNLTLVNSP 93
++T++++ G GTI+G G WW+ K L P + + +++ + N+
Sbjct: 155 NVTNLIVDG-GGTINGNGRIWWENSCKVNESLPCKGAPTAVTFDECNNLKVDKIRFRNAQ 213
Query: 94 SWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+ +++ L + AP SPNTDGI N I + I +GDDCI++ SG
Sbjct: 214 QMHLRIQGCNNVWASNLIVTAPGHSPNTDGIHITHSQNVFITNSTIGTGDDCISIVSG 271
>Medtr4g120320.1 | polygalacturonase | HC | chr4:49884372-49886301 |
20130731
Length = 422
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 48 GTIDGQGSYWWDKFHK----GQFKLTRPYMIEIMYSSQIQ---ISNLTLVNSPSWFVHPI 100
GT DGQG W KF + G +Y +++Q I + VN + V
Sbjct: 148 GTFDGQGQESW-KFAEDCKSGNGDTACVPNPPSLYFTKVQNAIIMGIKSVNPKGFHVFVT 206
Query: 101 YSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSGWDEYGI 157
S+I +Q L + AP SPNTDGI + +I C I +GDDC+ + G ++ I
Sbjct: 207 QCSNIRLQRLRLTAPDTSPNTDGIHISTSYGVKINRCTIGTGDDCVGMIDGSEQIAI 263
>Medtr3g438050.1 | polygalacturonase/glycoside hydrolase family
protein | HC | chr3:13011474-13013852 | 20130731
Length = 395
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Query: 42 VITGHNGTIDGQGSYWWD-KFHKGQFKLTR-PYMIEIMYSSQIQISNLTLVNSPSWFVHP 99
++ G GT+DGQGS W K R P + + + I +L NS
Sbjct: 114 LVVGGPGTLDGQGSSAWSVNDCKNNPNCPRLPISMTFDFVTNGTIHHLRSFNSKGAHFKL 173
Query: 100 IYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
++I + I AP DSPNTDGI + I+ I +GDDCIA+ SG
Sbjct: 174 FACENMIFTKIRISAPGDSPNTDGIKIGKSNGITIKSASIGTGDDCIAMVSG 225
>Medtr2g058640.1 | polygalacturonase 11c, putative | HC |
chr2:24232613-24230991 | 20130731
Length = 407
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 26 AGRFSSLIFGTHLTDVVITGHNGTIDGQGSYWWDKFHKGQFKLTRPYMIEI------MYS 79
A ++ ++ HLT ++G G DGQG+ + + + ++I M+
Sbjct: 100 ADQWVKFLYMEHLT---LSGK-GVFDGQGATAYKQAQPAAAWSGKKSNVKILMNLGFMFV 155
Query: 80 SQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYI 139
+ ++ +T +S ++ V + ++ G T+ AP DSPNTDGI ++ +I + I
Sbjct: 156 NNSMVTGVTSKDSKNFHVMVLGCNNFTFDGFTVTAPSDSPNTDGIHMGRSTDVKILNTNI 215
Query: 140 VSGDDCIAVKSGWDE---YGIKVG 160
+GDDC+++ G + G+K G
Sbjct: 216 GTGDDCVSLGDGSRKITVQGVKCG 239
>Medtr0157s0060.1 | polygalacturonase/glycoside hydrolase family
protein | LC | scaffold0157:20596-15247 | 20130731
Length = 365
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 55 SYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILA 114
S WW T + I S +Q++ +NS + YS + I + I A
Sbjct: 105 STWWK---------TNCSALHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITA 155
Query: 115 PVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
P +SPNTDGID S I+D I +GDDCIA+ +G
Sbjct: 156 PQESPNTDGIDIGHSSYVLIQDSTIATGDDCIAMNNG 192
>Medtr4g034020.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr4:12499881-12505230 | 20130731
Length = 365
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 55 SYWWDKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHPIYSSDIIIQGLTILA 114
S WW T + I S +Q++ +NS + YS + I + I A
Sbjct: 105 STWWK---------TNCSALHIDNCSNLQLNGTHHLNSARNHISIDYSDHVNIFKINITA 155
Query: 115 PVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
P +SPNTDGID S I+D I +GDDCIA+ +G
Sbjct: 156 PQESPNTDGIDIGHSSYVLIQDSTIATGDDCIAMNNG 192
>Medtr1g088160.1 | polygalacturonase | HC | chr1:39392282-39390473 |
20130731
Length = 407
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 40 DVVITGHNGTIDGQGSYWWD----KFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSW 95
D ++ +G DGQGS W K +KG + P ++ + ++T +NS +
Sbjct: 124 DGLVLKGSGVFDGQGSISWPLNDCKQNKGNCA-SLPSSLKFDKIKNAIVQDVTSLNSMQF 182
Query: 96 FVHPIYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAV 148
H S+I L I AP +SPNTDG+ S + + I +GDDCI+V
Sbjct: 183 HFHLHGCSNISFTNLHITAPGNSPNTDGMHISSSDFITVTNSVIATGDDCISV 235
>Medtr5g063430.1 | polygalacturonase/glycoside hydrolase family
protein | LC | chr5:26299058-26301816 | 20130731
Length = 315
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 42 VITGHNGTIDGQGSYWW--DKFHKGQFKLTRPYMIEIMYSSQIQISNLTLVNSPSWFVHP 99
++ G G++D QG+Y W + K P ++ Y + I ++ NS
Sbjct: 108 LMVGGGGSLDAQGAYAWKMNDCQKNPNCRPLPTSMKFDYITNGYIHHMHSFNSKQSHFGL 167
Query: 100 IYSSDIIIQGLTILAPVDSPNTDGIDPDSCSNTRIEDCYIVSGDDCIAVKSG 151
+++ + L I AP DSPNTDGI + I I +G+DCI++ SG
Sbjct: 168 YRCNNMTLTKLQIKAPGDSPNTDGIKIGKSTGINITSVNIRTGNDCISMLSG 219