Miyakogusa Predicted Gene

Lj0g3v0097149.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0097149.1 CUFF.5496.1
         (178 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130570.1 | eukaryotic translation initiation factor iso4G...   170   8e-43

>Medtr4g130570.1 | eukaryotic translation initiation factor iso4G |
           HC | chr4:54404124-54410540 | 20130731
          Length = 779

 Score =  170 bits (430), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 92/175 (52%), Positives = 105/175 (60%), Gaps = 8/175 (4%)

Query: 1   MQQGDQTVXXXXXXXXXXXXXXXXXFXXXXXXXXX-------LPLLRPHGAALPNFSIKA 53
           MQQGDQTV                 F                L  LRP+  A    + K 
Sbjct: 1   MQQGDQTVLSLRPGGGRGNRLLAPRFDSSSSNSPAFGSFSSDLSHLRPNAGASSLLAFKV 60

Query: 54  GDSRFEGRERIRYTRDQLLQLREAVE-TXXXXXXXXXXXXAELLGEDQTWGRSENNPPQQ 112
           GDS+FE RER+RYT+++LL +RE +E T            AEL GEDQ+WGR ENNPP Q
Sbjct: 61  GDSQFESRERVRYTKEELLHIRETLEETPEDILKLRHDIDAELFGEDQSWGRVENNPPTQ 120

Query: 113 VQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFSNASQVNRQDQQNSQYG 167
           +QNRYSEPDNRDWRGRS Q PANADERSWDN+KENREF N SQVNRQDQ  +  G
Sbjct: 121 IQNRYSEPDNRDWRGRSAQPPANADERSWDNIKENREFGNTSQVNRQDQPRTNQG 175