Miyakogusa Predicted Gene

Lj0g3v0096839.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0096839.1 tr|J3S9L2|J3S9L2_CROAD Signal peptidase complex
subunit 3-like OS=Crotalus adamanteus PE=2 SV=1,36.13,4e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT
(SPC22/23),Signal pept,CUFF.5398.1
         (149 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g113740.1 | signal peptidase complex subunit 3B-like prote...   229   6e-61
Medtr3g027890.1 | signal peptidase complex subunit 3B-like prote...   223   4e-59

>Medtr7g113740.1 | signal peptidase complex subunit 3B-like protein
           | HC | chr7:46878551-46875326 | 20130731
          Length = 167

 Score =  229 bits (584), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 110/149 (73%), Positives = 114/149 (76%)

Query: 1   MHSFGYRXXXXXXXXXXXXXXMCAMAXXXXXXXXXXXXXQVQVLNINWFQKQPNGNDEVS 60
           MHSFGYR              MCA+A             QVQVLNINWFQKQPNGNDEVS
Sbjct: 1   MHSFGYRANALLTFSLTILALMCAIASLTDSFNSPSPSAQVQVLNINWFQKQPNGNDEVS 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETSKNSLNQISLWDAIIPSKERAKFWIHTSNK 120
           MTLNIS DLQSLFTWNTKQVFVFLAAEYET K  LNQISLWD IIPSKE AKF IHTSNK
Sbjct: 61  MTLNISGDLQSLFTWNTKQVFVFLAAEYETRKKPLNQISLWDGIIPSKEHAKFLIHTSNK 120

Query: 121 YRFIDQGSNLRSKEFNLTMHWHVMPKTGK 149
           YRFIDQG+NLR +EFNLT+HWHVMPKTGK
Sbjct: 121 YRFIDQGTNLRGREFNLTLHWHVMPKTGK 149


>Medtr3g027890.1 | signal peptidase complex subunit 3B-like protein
           | HC | chr3:8796837-8801535 | 20130731
          Length = 167

 Score =  223 bits (569), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 106/149 (71%), Positives = 115/149 (77%)

Query: 1   MHSFGYRXXXXXXXXXXXXXXMCAMAXXXXXXXXXXXXXQVQVLNINWFQKQPNGNDEVS 60
           MHSFGYR              +CA+A             QVQVLN+NWFQKQPNGNDEV 
Sbjct: 1   MHSFGYRLNALFTFAVTILGFICAIASFTDTLNSPSPSVQVQVLNVNWFQKQPNGNDEVY 60

Query: 61  MTLNISADLQSLFTWNTKQVFVFLAAEYETSKNSLNQISLWDAIIPSKERAKFWIHTSNK 120
           +TLNISADLQ+LFTWNTKQVF FLAAEYET K+ LNQISLWDAIIP+KE AKF IHTSNK
Sbjct: 61  LTLNISADLQTLFTWNTKQVFAFLAAEYETPKHPLNQISLWDAIIPTKEHAKFTIHTSNK 120

Query: 121 YRFIDQGSNLRSKEFNLTMHWHVMPKTGK 149
           YRF+DQGSNLR KEFNLT+HWHVMPKTGK
Sbjct: 121 YRFVDQGSNLRGKEFNLTLHWHVMPKTGK 149