Miyakogusa Predicted Gene

Lj0g3v0096719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0096719.1 CUFF.5378.1
         (149 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0311s0030.1 | cornichon family protein | HC | scaffold0311:...   219   8e-58
Medtr7g092530.1 | ER-derived vesicles protein ERV14 | HC | chr7:...   210   4e-55
Medtr0311s0030.2 | cornichon family protein | HC | scaffold0311:...   166   5e-42
Medtr4g102010.1 | cornichon family protein | HC | chr4:42217413-...   107   5e-24
Medtr5g011690.1 | cornichon family protein | HC | chr5:3406410-3...    99   1e-21
Medtr5g011690.2 | cornichon family protein | HC | chr5:3406410-3...    99   1e-21
Medtr7g074930.1 | cornichon family protein | HC | chr7:28070017-...    74   6e-14

>Medtr0311s0030.1 | cornichon family protein | HC |
           scaffold0311:9983-15900 | 20130731
          Length = 127

 Score =  219 bits (558), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 100/114 (87%), Positives = 110/114 (96%)

Query: 1   MGWNLFFWLVICFPSNIALLASTFYQILILSDLEADYVNPFDASSRINYFVLPEFIGQGV 60
           MGWNLFFWLVICFP+NIALLAS FYQ+LILSDLE+DY+NPF+ASSRINYF+LPEFIGQGV
Sbjct: 1   MGWNLFFWLVICFPTNIALLASNFYQVLILSDLESDYINPFEASSRINYFILPEFIGQGV 60

Query: 61  LCALCLFTGHWVMFLLTVPVTCYHVMLYVKRQHLIDVTEVFRVLNAEKRFRIAK 114
           LCALCL TGHW+MFLL VPVTCYH MLYVKR+HLIDVTEVFRVL+AEK+FRIAK
Sbjct: 61  LCALCLLTGHWLMFLLNVPVTCYHAMLYVKREHLIDVTEVFRVLSAEKKFRIAK 114


>Medtr7g092530.1 | ER-derived vesicles protein ERV14 | HC |
           chr7:36697165-36690743 | 20130731
          Length = 142

 Score =  210 bits (535), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 99/142 (69%), Positives = 115/142 (80%)

Query: 1   MGWNLFFWLVICFPSNIALLASTFYQILILSDLEADYVNPFDASSRINYFVLPEFIGQGV 60
           M ++L FWL+ICFP NIA LAS FYQ+L+LSDLEADY+NP+DASS+INYFV+PEFIGQG+
Sbjct: 1   MAFDLIFWLLICFPLNIAFLASAFYQVLMLSDLEADYINPYDASSKINYFVVPEFIGQGL 60

Query: 61  LCALCLFTGHWVMFLLTVPVTCYHVMLYVKRQHLIDVTEVFRVLNAEKRFRIAKXXXXXX 120
           LCAL LFTGHWVMFLL +P+  YHVMLYVKRQHL+DVTEVFRVLNAEK+FRI K      
Sbjct: 61  LCALFLFTGHWVMFLLMLPLASYHVMLYVKRQHLLDVTEVFRVLNAEKKFRIVKLTFYLT 120

Query: 121 XXXXXXFRLTLIAVFYLGIEDD 142
                 FRL LI V Y  ++DD
Sbjct: 121 LVMITIFRLVLIVVNYFDMDDD 142


>Medtr0311s0030.2 | cornichon family protein | HC |
          scaffold0311:9876-14866 | 20130731
          Length = 99

 Score =  166 bits (421), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 76/87 (87%), Positives = 83/87 (95%)

Query: 1  MGWNLFFWLVICFPSNIALLASTFYQILILSDLEADYVNPFDASSRINYFVLPEFIGQGV 60
          MGWNLFFWLVICFP+NIALLAS FYQ+LILSDLE+DY+NPF+ASSRINYF+LPEFIGQGV
Sbjct: 1  MGWNLFFWLVICFPTNIALLASNFYQVLILSDLESDYINPFEASSRINYFILPEFIGQGV 60

Query: 61 LCALCLFTGHWVMFLLTVPVTCYHVML 87
          LCALCL TGHW+MFLL VPVTCYH ML
Sbjct: 61 LCALCLLTGHWLMFLLNVPVTCYHAML 87


>Medtr4g102010.1 | cornichon family protein | HC |
           chr4:42217413-42214878 | 20130731
          Length = 137

 Score =  107 bits (266), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 54/111 (48%), Positives = 74/111 (66%), Gaps = 1/111 (0%)

Query: 4   NLFFWLVICFPSNIALLASTFYQILILSDLEADYVNPFDASSRINYFVLPEFIGQGVLCA 63
           ++F WL   F + IAL+    YQ++ L+DLE DY+NP+D++SRIN  VLPE+I    LC 
Sbjct: 3   DIFAWL-FSFFTLIALIVIIIYQLMCLADLEFDYINPYDSASRINKMVLPEYITVAALCG 61

Query: 64  LCLFTGHWVMFLLTVPVTCYHVMLYVKRQHLIDVTEVFRVLNAEKRFRIAK 114
             L TGHWVM LL  P   Y+  LY + +HL+DVTE+F +L  EK+ R+ K
Sbjct: 62  FYLVTGHWVMALLCAPYLYYNYRLYSQGKHLVDVTEIFNMLAREKKQRLIK 112


>Medtr5g011690.1 | cornichon family protein | HC |
           chr5:3406410-3404005 | 20130731
          Length = 137

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 4   NLFFWLVICFPSNIALLASTFYQILILSDLEADYVNPFDASSRINYFVLPEFIGQGVLCA 63
           +LF WL I F   IALL    YQ++ L++LE DY+NP+D S RIN  +LPEF  Q +L  
Sbjct: 3   DLFGWL-ISFFLLIALLVLVTYQLMCLAELEFDYLNPYDFSKRINSVMLPEFYTQAILTV 61

Query: 64  LCLFTGHWVMFLLTVPVTCYHVMLYVKRQHLIDVTEVFRVLNAEKRFRIAK 114
             L TGHW+M    +P   ++  LY +++HLIDVTE+F +L  EK+ R+ K
Sbjct: 62  FYLITGHWIMSFFCLPYLYFNFRLYRQKKHLIDVTEIFNMLAWEKKQRLVK 112


>Medtr5g011690.2 | cornichon family protein | HC |
           chr5:3406410-3404005 | 20130731
          Length = 137

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 1/111 (0%)

Query: 4   NLFFWLVICFPSNIALLASTFYQILILSDLEADYVNPFDASSRINYFVLPEFIGQGVLCA 63
           +LF WL I F   IALL    YQ++ L++LE DY+NP+D S RIN  +LPEF  Q +L  
Sbjct: 3   DLFGWL-ISFFLLIALLVLVTYQLMCLAELEFDYLNPYDFSKRINSVMLPEFYTQAILTV 61

Query: 64  LCLFTGHWVMFLLTVPVTCYHVMLYVKRQHLIDVTEVFRVLNAEKRFRIAK 114
             L TGHW+M    +P   ++  LY +++HLIDVTE+F +L  EK+ R+ K
Sbjct: 62  FYLITGHWIMSFFCLPYLYFNFRLYRQKKHLIDVTEIFNMLAWEKKQRLVK 112


>Medtr7g074930.1 | cornichon family protein | HC |
          chr7:28070017-28072366 | 20130731
          Length = 122

 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 30/69 (43%), Positives = 49/69 (71%)

Query: 25 YQILILSDLEADYVNPFDASSRINYFVLPEFIGQGVLCALCLFTGHWVMFLLTVPVTCYH 84
          YQ+++L DLE DY+NP+D++SR+NY +LPEF+   + C L L  GHW +FL+ +P   Y+
Sbjct: 23 YQLILLVDLEFDYINPYDSTSRVNYVILPEFLIMAIFCFLNLIAGHWFIFLIALPCLYYN 82

Query: 85 VMLYVKRQH 93
          V + ++  +
Sbjct: 83 VSIIMRPSN 91