Miyakogusa Predicted Gene

Lj0g3v0095369.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0095369.1 Non Characterized Hit- tr|I3SWC8|I3SWC8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,60.62,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,NULL; no description,NULL;
LRAT,LRAT-like domai,NODE_53624_length_845_cov_37.029587.path2.1
         (239 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g076250.1 | lecithin retinol acyltransferase | HC | chr5:3...   270   7e-73
Medtr1g057650.1 | lecithin retinol acyltransferase | HC | chr1:2...   234   5e-62
Medtr3g064020.1 | lecithin retinol acyltransferase | LC | chr3:2...   225   2e-59
Medtr7g117750.1 | lecithin retinol acyltransferase | HC | chr7:4...   201   4e-52
Medtr3g063990.1 | lecithin retinol acyltransferase | LC | chr3:2...   182   3e-46

>Medtr5g076250.1 | lecithin retinol acyltransferase | HC |
           chr5:32478491-32483095 | 20130731
          Length = 254

 Score =  270 bits (691), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 136/244 (55%), Positives = 162/244 (66%), Gaps = 15/244 (6%)

Query: 1   MRLLSNRIDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPENGKGSCL--- 57
           M + SN+ID  QLNPGDHIYSWRQAY+YAHHGIYVG+G V+HFT+    E G G+ L   
Sbjct: 1   MGVFSNKIDHEQLNPGDHIYSWRQAYIYAHHGIYVGDGMVLHFTRGGGQEIGTGTVLDRF 60

Query: 58  -IISSLLSPTEIPCPTCGEQTRTDGVISSCMDCFLNGGDLYRFEYGVSGMFFLAKVRGGT 116
              SS  + T+ PCP CG+Q +TDGV+SSC+DCFL+G +LY FEYGVS  +FLAK RGGT
Sbjct: 61  LCSSSPSNGTDTPCPKCGDQNKTDGVVSSCLDCFLSGDNLYLFEYGVSAAYFLAKARGGT 120

Query: 117 CTLASSDPPEEVLHRAQFLLENGFGGYDVFKKNCEDFAIYCKTGLLVW-----GQSGQVX 171
           CTLA SDP E+VL RA FL ENGFGGY+VF  NCEDFAIYCKTGLL+      G+SGQ  
Sbjct: 121 CTLAVSDPTEDVLRRASFLFENGFGGYNVFNNNCEDFAIYCKTGLLIITSISVGRSGQAA 180

Query: 172 XXXXXXXXXXWSPIRLMTTXXXXXXXXXXXXXXXXXXYCASRLSYDIGVRKDKIKIPVEK 231
                      +P+R MTT                  YC SR   DIGVR+D  K+PVEK
Sbjct: 181 SCLAAASAVISTPLRFMTT------SFSGLAAVGYGMYCVSRFVSDIGVRRDVSKVPVEK 234

Query: 232 IAEM 235
           +  +
Sbjct: 235 LVAL 238


>Medtr1g057650.1 | lecithin retinol acyltransferase | HC |
           chr1:25342939-25339608 | 20130731
          Length = 264

 Score =  234 bits (597), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 126/241 (52%), Positives = 154/241 (63%), Gaps = 16/241 (6%)

Query: 1   MRLLSNRIDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPENGKGSCL--- 57
           M LLSNR+ R  L  GDHIYSWR AY+YAHHGIY+G+ KVIHFT+R   E G G+ L   
Sbjct: 1   MGLLSNRVTRESLKAGDHIYSWRTAYIYAHHGIYIGDDKVIHFTRRGQ-EVGTGTVLDVL 59

Query: 58  IISSLLSPTEIPCPTCGEQTRTDGVISSCMDCFLNGGDLYRFEYGVSGMFFLAKVRGGTC 117
           ++SS  + ++  CP C       GV+ SC++CFL GG LYRFEY VS   FLAK RGGTC
Sbjct: 60  LLSSAPARSQEICPICIPSQEDHGVVVSCLNCFLAGGVLYRFEYAVSPALFLAKARGGTC 119

Query: 118 TLASSDPPEEVLHRAQFLLENGFGGYDVFKKNCEDFAIYCKTGLLV-----WGQSGQ-VX 171
           TLA SD  + V+HRA +LLENGF  Y+VFK NCEDFAIYCKTGL+V      GQSGQ V 
Sbjct: 120 TLAVSDEDDVVVHRALYLLENGFRCYNVFKNNCEDFAIYCKTGLVVVDERTIGQSGQAVS 179

Query: 172 XXXXXXXXXXWSPIRLMTTXXXXXXXXXXXXXXXXXXYCASRLSYDIGVRKDKIKIPVEK 231
                      +P+RL+TT                  YCASR + DIG+R+D +KI VE+
Sbjct: 180 IIGGPLAAVLSTPLRLVTT------NVYGMAATAVGVYCASRYAADIGMRRDVVKIQVEE 233

Query: 232 I 232
           +
Sbjct: 234 L 234


>Medtr3g064020.1 | lecithin retinol acyltransferase | LC |
           chr3:28791368-28790464 | 20130731
          Length = 251

 Score =  225 bits (574), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/253 (49%), Positives = 149/253 (58%), Gaps = 21/253 (8%)

Query: 1   MRLLSNRIDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPENGKGSCLIIS 60
           M +LSN+IDR+QL  GDHIYSWRQAY+YAHHGIY+G+  VIHFT     +   G   I+ 
Sbjct: 1   MEVLSNKIDRKQLKTGDHIYSWRQAYVYAHHGIYIGDEMVIHFTI-GSGQQATGIPAILD 59

Query: 61  SLLSP------TEIPCPTCGE--QTRTDGVISSCMDCFLNGGDLYRFEYGVSGMFFLAKV 112
              +       T++PC  C E  +TR  GV SSC+DCFL+GG LY F+YGVS + FLA+ 
Sbjct: 60  RFFTSSAPSFDTKLPCQRCREAAETRNHGVFSSCLDCFLSGGQLYLFQYGVSKLQFLAQA 119

Query: 113 RGGTCTLASSDPPEEVLHRAQFLLENGFGGYDVFKKNCEDFAIYCKTGLLVW--GQSGQV 170
           RGGTCTLASSDP EEVL RA +LLE GFG Y + K NCEDFA+YCKTGL     G SGQ 
Sbjct: 120 RGGTCTLASSDPTEEVLPRALYLLEKGFGCYHISKNNCEDFAVYCKTGLFATTKGCSGQA 179

Query: 171 XXXXXXXXXXXWSPIRLMTTXXXXXXXXXXXXXXXXXXYCASRLSYDIGVR----KDKIK 226
                       S  R + +                  YC  RL  DIG R    KD  K
Sbjct: 180 ASYLAATSTVASSSFRFVNS------SLFGKALVGCGTYCIKRLVSDIGFRYEVIKDVTK 233

Query: 227 IPVEKIAEMAREG 239
           +PVE+I E+  E 
Sbjct: 234 VPVERIPELTMEA 246


>Medtr7g117750.1 | lecithin retinol acyltransferase | HC |
           chr7:48908813-48907086 | 20130731
          Length = 259

 Score =  201 bits (512), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 104/239 (43%), Positives = 139/239 (58%), Gaps = 12/239 (5%)

Query: 1   MRLLSNRIDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPENGKGSCLIIS 60
           M L+SNRI++  + PGDH+Y++R  + Y+HHGI+VG  KV+HF    + ++   +   + 
Sbjct: 1   MGLISNRIEKHDIKPGDHVYTYRAVFSYSHHGIFVGGSKVVHFRPDRNFKSITETSSNVD 60

Query: 61  SLLSPTEIPCPTCGEQTRTDGVISSCMDCFLNGGDLYRFEYGVSGMFFLAKVRGGTCTLA 120
                     P CG +    GV+ SC+DCFL  G LY FEYGVS   FL ++RGGTCT A
Sbjct: 61  DPTPTPCPTFPDCGFRQPNSGVVLSCLDCFLRNGSLYCFEYGVSPTLFLTRIRGGTCTTA 120

Query: 121 SSDPPEEVLHRAQFLLENGFGGYDVFKKNCEDFAIYCKTGLLV-----WGQSGQVXXXXX 175
             DPPE V+HRA +LL+NGFG YDVF+ NCEDFA+YCKTGLL+      G+SGQ      
Sbjct: 121 LPDPPETVIHRAMYLLQNGFGNYDVFQNNCEDFAMYCKTGLLIVDKQGVGRSGQASSVIG 180

Query: 176 XXXXXXW-SPIRLMTTXXXXXXXXXXXXXXXXXXYCASRLSYDIGVRKDKIKIPVEKIA 233
                   SP++L+                    YC SR + DIGVR D +K+ VE +A
Sbjct: 181 APLAAMLSSPLKLLMP------SPVGMATVTAGMYCMSRYATDIGVRSDVVKVGVEDLA 233


>Medtr3g063990.1 | lecithin retinol acyltransferase | LC |
           chr3:28784361-28783379 | 20130731
          Length = 272

 Score =  182 bits (461), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/207 (50%), Positives = 123/207 (59%), Gaps = 46/207 (22%)

Query: 8   IDRRQLNPGDHIYSWRQAYLYAHHGIYVGEGKVIHFTQRADPEN---------------- 51
           IDR+QL  GDHIYSWRQAY+YAHHGIYVG+G VIHFT  A  +                 
Sbjct: 2   IDRKQLKAGDHIYSWRQAYIYAHHGIYVGDGMVIHFTDGAIQQTETPTISNRFCSSSVPS 61

Query: 52  ------------------------GKGSCLIISSLLS-PTEIPCPTCGE--QTRTDGVIS 84
                                      SC   SS+ S  T+IPCP CG+  QT+  GVI 
Sbjct: 62  CRSSVPSCRSSVPSSRSSVPSCRSSVPSCR--SSVPSLDTDIPCPRCGDCCQTKMHGVIL 119

Query: 85  SCMDCFLNGGDLYRFEYGVSGMFFLAKVRGGTCTLASSDPPEEVLHRAQFLLENGFGGYD 144
           SC+DCFL+ G L+R+ YGVS + F+ + RGGTCT ASSDP +EVL RA +LLENGFG Y 
Sbjct: 120 SCLDCFLSEGGLHRYLYGVSTLHFIVQARGGTCTRASSDPTKEVLFRALYLLENGFGDYH 179

Query: 145 VFKKNCEDFAIYCKTGLLVW-GQSGQV 170
            +K NCEDFAIYCKTG L   G SGQ 
Sbjct: 180 FYKNNCEDFAIYCKTGFLSSEGGSGQA 206