Miyakogusa Predicted Gene
- Lj0g3v0095179.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0095179.1 tr|B9IIE5|B9IIE5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_576428 PE=4
SV=1,24.46,0.00000008,PPR,Pentatricopeptide repeat; PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat;
coiled-,gene.g7263.t1.1
(364 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g059115.1 | PPR containing plant-like protein | HC | chr8:... 353 1e-97
Medtr2g013450.1 | PPR containing plant protein | HC | chr2:36232... 341 8e-94
Medtr8g465890.1 | PPR containing plant protein | HC | chr8:23498... 198 9e-51
Medtr8g465890.2 | PPR containing plant protein | HC | chr8:23498... 198 9e-51
Medtr2g047855.1 | PPR containing plant protein | HC | chr2:20930... 189 3e-48
Medtr2g090290.1 | PPR containing plant protein | HC | chr2:38388... 186 4e-47
Medtr1g086820.1 | PPR containing plant protein | HC | chr1:38878... 181 7e-46
Medtr1g072300.2 | PPR containing plant protein | HC | chr1:32088... 175 5e-44
Medtr1g072300.1 | PPR containing plant protein | HC | chr1:32088... 175 5e-44
Medtr1g072300.3 | PPR containing plant protein | HC | chr1:32088... 175 5e-44
Medtr8g069570.1 | PPR containing plant protein | HC | chr8:29205... 163 2e-40
Medtr1g022400.1 | PPR containing plant protein | HC | chr1:71208... 155 7e-38
Medtr3g099753.2 | PPR containing plant-like protein | HC | chr3:... 154 1e-37
Medtr3g099753.1 | PPR containing plant-like protein | HC | chr3:... 153 3e-37
Medtr8g007375.1 | PPR containing plant-like protein | HC | chr8:... 132 4e-31
Medtr8g031520.1 | PPR containing plant protein | HC | chr8:11834... 125 5e-29
Medtr7g089770.1 | DNA-binding protein | HC | chr7:35161437-35164... 110 2e-24
Medtr8g059110.1 | PPR containing protein, putative | HC | chr8:2... 104 1e-22
Medtr1g050750.1 | DNA-binding protein | HC | chr1:19651324-19646... 98 1e-20
Medtr2g096880.1 | PPR containing plant-like protein | HC | chr2:... 85 9e-17
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 64 2e-10
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 62 8e-10
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 62 8e-10
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 60 3e-09
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 60 3e-09
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 59 8e-09
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 58 2e-08
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 57 3e-08
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 57 3e-08
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 57 3e-08
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 55 1e-07
Medtr1g033840.1 | PPR containing plant-like protein | HC | chr1:... 55 1e-07
Medtr7g056613.1 | PPR containing plant-like protein | HC | chr7:... 54 2e-07
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 54 2e-07
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 54 2e-07
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 54 3e-07
Medtr3g083680.1 | PPR containing plant-like protein | HC | chr3:... 54 3e-07
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 4e-07
Medtr3g053780.1 | PPR containing plant-like protein | HC | chr3:... 53 4e-07
Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 4e-07
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 53 4e-07
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 53 5e-07
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 53 5e-07
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 52 7e-07
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 8e-07
Medtr7g044790.1 | PPR containing plant-like protein | HC | chr7:... 51 1e-06
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 51 2e-06
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 51 2e-06
Medtr5g008300.1 | PPR containing plant-like protein | HC | chr5:... 51 2e-06
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 51 2e-06
Medtr2g058580.1 | PPR containing plant-like protein | HC | chr2:... 51 2e-06
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 3e-06
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 50 4e-06
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 50 4e-06
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 4e-06
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 50 4e-06
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 49 6e-06
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 7e-06
>Medtr8g059115.1 | PPR containing plant-like protein | HC |
chr8:20661178-20662671 | 20130731
Length = 409
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 172/261 (65%), Positives = 201/261 (77%), Gaps = 4/261 (1%)
Query: 96 MSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLV 155
MSSKGLCPIS D AVQL LIG+V GL+SA+SYFQNLSD DKTEK +GALLNCYVR GLV
Sbjct: 1 MSSKGLCPISAKDHAVQLNLIGKVRGLDSAKSYFQNLSDEDKTEKAYGALLNCYVREGLV 60
Query: 156 DKSLSQMQKMKEMGYVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCI 215
DKSLS MQK+K++G++S LNYNNIMCLY Q++Q+E+V GVL MK+DGVSPD FSYR+CI
Sbjct: 61 DKSLSLMQKIKDLGFISVLNYNNIMCLYLQTEQYEEVFGVLESMKKDGVSPDTFSYRICI 120
Query: 216 NSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLD 275
NSYG RSD NMEKLLEE+E + H DW TY+ VA ++I+A D +D
Sbjct: 121 NSYGTRSDFFNMEKLLEEMELQSHVRSDWATYAMVANYFIKADLKEKALVYLKKCEDKVD 180
Query: 276 KRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEK 335
KR +AYN+LISHYA L KKAMMRLWKLQK NCK+QLN EYIT+L LVKLGD DEAEK
Sbjct: 181 KRDTIAYNYLISHYASLGNKKAMMRLWKLQKENCKKQLNREYITMLGSLVKLGDFDEAEK 240
Query: 336 LLGEWELS----DGLSPSLFL 352
LL EWE+S D P++ L
Sbjct: 241 LLAEWEISTNSYDFRVPNILL 261
>Medtr2g013450.1 | PPR containing plant protein | HC |
chr2:3623288-3620902 | 20130731
Length = 495
Score = 341 bits (874), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 169/317 (53%), Positives = 213/317 (67%), Gaps = 1/317 (0%)
Query: 28 RSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFT 87
RS T+ TK+ LYS ISPLG+ + SV P L+ WV +GN + +LQ IV+ LR R RFT
Sbjct: 18 RSYYTSKTKKPSLYSVISPLGNQTTSVAPQLDDWVYKGNKVSVGELQRIVRDLRKRSRFT 77
Query: 88 HALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLN 147
ALQVSEWM+ G+C SP + AV L L GRVHG +AE+YF +L DI++ EK HGALLN
Sbjct: 78 QALQVSEWMNKIGVCIFSPVEHAVHLDLTGRVHGFYAAETYFNSLKDIERNEKTHGALLN 137
Query: 148 CYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSP 206
CYVR VDKSLS ++KMKE+G+ +S L YNNIMCLY QHEKV V MKE+ V P
Sbjct: 138 CYVRQRQVDKSLSHLKKMKELGFALSSLTYNNIMCLYTNIGQHEKVSDVFNEMKENHVLP 197
Query: 207 DIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXX 266
D FSYR+CI SYG RSD++ M +L+E+E + H +DW TYS VA FYI+A
Sbjct: 198 DNFSYRICIGSYGVRSDIDGMNAILKEMESQPHIVMDWNTYSVVANFYIKAELSSEAIDA 257
Query: 267 XXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVK 326
LD + YNHLIS YA L K ++RLW ++K+ CKR LN ++IT+L LVK
Sbjct: 258 LRKCEKRLDDKDGEGYNHLISLYARLGKKNEVLRLWDMEKSACKRCLNRDFITMLESLVK 317
Query: 327 LGDLDEAEKLLGEWELS 343
L + DEA+K+L EWE S
Sbjct: 318 LEEFDEADKILKEWEFS 334
>Medtr8g465890.1 | PPR containing plant protein | HC |
chr8:23498318-23503190 | 20130731
Length = 492
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 187/329 (56%), Gaps = 22/329 (6%)
Query: 24 LRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTR 83
LRL S+ST LY RIS GDP + + P+L +W+Q+G I +LQ +K LRTR
Sbjct: 16 LRLLHSSSTPTDT---LYHRISRAGDPIIPMTPILNQWIQEGRDINHSELQFFIKQLRTR 72
Query: 84 KRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHG 143
+RF ALQ+SEWMS++ + GD A +L LIG+V GL+ A YF ++ K KV+G
Sbjct: 73 RRFKQALQISEWMSNERNLHLLSGDIATRLDLIGKVRGLDQAVKYFNSVPHTSKDFKVYG 132
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGYVS----CLNYNNIMCLYAQSDQHEKVPGVLAMM 199
ALL+CY + V+K+ M+K+KE + ++Y+ ++ LY+++ QHEK+ ++ M
Sbjct: 133 ALLHCYAQYNSVEKAELIMKKLKESSSNNEQDLVVSYHVLLKLYSRTGQHEKLVALMKEM 192
Query: 200 KEDGV--SPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRA 257
KE + S + S+ +N+Y S+++ MEKLL ++E + ++W+TYS VA YI+
Sbjct: 193 KEKKMCNSSTLTSW---LNAYAITSNIDEMEKLLAKMEVDHSITLNWLTYSVVADGYIKV 249
Query: 258 GXXXXXXXXXXXXXDNLDKRSAVA-YNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGE 316
G + +S A Y L++ YA + K + R+W + CK LNG
Sbjct: 250 GQFDKALIVLKKSEQLIRGKSKRAVYQSLLTKYAAIGKKDDVYRIWNI----CK-SLNGS 304
Query: 317 ----YITLLSWLVKLGDLDEAEKLLGEWE 341
YI++L L L D+D AE +L EWE
Sbjct: 305 HHSTYISMLMSLSNLNDIDGAETILEEWE 333
>Medtr8g465890.2 | PPR containing plant protein | HC |
chr8:23498212-23503209 | 20130731
Length = 492
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 187/329 (56%), Gaps = 22/329 (6%)
Query: 24 LRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTR 83
LRL S+ST LY RIS GDP + + P+L +W+Q+G I +LQ +K LRTR
Sbjct: 16 LRLLHSSSTPTDT---LYHRISRAGDPIIPMTPILNQWIQEGRDINHSELQFFIKQLRTR 72
Query: 84 KRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHG 143
+RF ALQ+SEWMS++ + GD A +L LIG+V GL+ A YF ++ K KV+G
Sbjct: 73 RRFKQALQISEWMSNERNLHLLSGDIATRLDLIGKVRGLDQAVKYFNSVPHTSKDFKVYG 132
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGYVS----CLNYNNIMCLYAQSDQHEKVPGVLAMM 199
ALL+CY + V+K+ M+K+KE + ++Y+ ++ LY+++ QHEK+ ++ M
Sbjct: 133 ALLHCYAQYNSVEKAELIMKKLKESSSNNEQDLVVSYHVLLKLYSRTGQHEKLVALMKEM 192
Query: 200 KEDGV--SPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRA 257
KE + S + S+ +N+Y S+++ MEKLL ++E + ++W+TYS VA YI+
Sbjct: 193 KEKKMCNSSTLTSW---LNAYAITSNIDEMEKLLAKMEVDHSITLNWLTYSVVADGYIKV 249
Query: 258 GXXXXXXXXXXXXXDNLDKRSAVA-YNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGE 316
G + +S A Y L++ YA + K + R+W + CK LNG
Sbjct: 250 GQFDKALIVLKKSEQLIRGKSKRAVYQSLLTKYAAIGKKDDVYRIWNI----CK-SLNGS 304
Query: 317 ----YITLLSWLVKLGDLDEAEKLLGEWE 341
YI++L L L D+D AE +L EWE
Sbjct: 305 HHSTYISMLMSLSNLNDIDGAETILEEWE 333
>Medtr2g047855.1 | PPR containing plant protein | HC |
chr2:20930476-20928117 | 20130731
Length = 494
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 175/324 (54%), Gaps = 7/324 (2%)
Query: 20 NFQLLRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKT 79
N LLR S+ST L+ RIS GDP + + +L +W+Q+G + + +K
Sbjct: 16 NTTLLRFLHSSSTPTDT---LFLRISRAGDPIIPITSILNQWIQEGRDVSHSDIHFFIKQ 72
Query: 80 LRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTE 139
LR R+RF ALQ+SEWMS++ + GD A +L LI +VHGL+ AE YF ++ K
Sbjct: 73 LRIRRRFKQALQISEWMSNERNLHLLSGDIATRLDLIAKVHGLDQAEKYFNSVPHTSKDF 132
Query: 140 KVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAM 198
KV+GA+LNCY + V+K M+K+KE + +Y ++ LY ++ Q EK+ ++
Sbjct: 133 KVYGAMLNCYAQYNSVEKVEYIMKKLKESSSDDNAQDYPVLLKLYYRTGQREKLVALMKE 192
Query: 199 MKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
MK+ + D + +N+Y +++ MEKLL +IE + ++W TYS VA YI+AG
Sbjct: 193 MKDKKIY-DSSTLNSWLNAYAITGNIDEMEKLLAKIEVDHSITLNWRTYSAVADGYIKAG 251
Query: 259 XXXXXXXXXXXXXDNLDKRSA-VAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEY 317
+ +S AY L++ YA K + R+W + K+ Q N Y
Sbjct: 252 QFDKSLIVLKKSEQLIRGKSKRAAYQSLLTKYAATGKKDDVYRIWNICKSLNGSQ-NSTY 310
Query: 318 ITLLSWLVKLGDLDEAEKLLGEWE 341
I++L L L D+D AE +L EWE
Sbjct: 311 ISMLMSLSNLNDIDGAETILEEWE 334
>Medtr2g090290.1 | PPR containing plant protein | HC |
chr2:38388050-38391519 | 20130731
Length = 484
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 188/342 (54%), Gaps = 11/342 (3%)
Query: 9 ILRHKFQNLTANFQLLRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAI 68
++R K + + R + ST +L RI G+P S++P+L +WV+QG +
Sbjct: 3 LIRSKICKTVNPYLVSRSIQMYSTPPIGFTELEKRILKNGNPKSSMLPILNQWVEQGGDV 62
Query: 69 KEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESY 128
E L+ I+ L +RF+HALQVSEW+S+ +S GD A QL LI +VHGLE AE +
Sbjct: 63 IEPVLKRIIARLSNSRRFSHALQVSEWISNNSNNDLSSGDIAKQLNLISKVHGLEQAEKF 122
Query: 129 FQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVS-CLNYNNIMCLYAQSD 187
F+ + + K++ ALL CY ++++ M+K+KE+ + YN ++ LYAQ
Sbjct: 123 FKGIPEAKIGFKIYAALLGCYAEHKSLEEAEVIMKKIKELRPAHMTVCYNMMLKLYAQKG 182
Query: 188 QHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTY 247
++E + ++ MKE + + ++ + +N+Y D+E MEKLL ++E + VDW TY
Sbjct: 183 KYELLDRLMQEMKEKDIC-NGATFTIRLNAYANSRDIEGMEKLLMQMEADPMATVDWYTY 241
Query: 248 STVATFYIRAGXXXXXXXXXXXXXDNLDKRSA--------VAYNHLISHYAGLEMKKAMM 299
ST A Y++ G + ++ +++ +AY L + +A + K A+
Sbjct: 242 STAANAYMKVGNVEKGSAMLKKSENLVNAQTSRIPYESRRLAYESLQTMHAAIGNKDAVY 301
Query: 300 RLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWE 341
RLW K N + LN Y+ +LS LVKL D++ AEK+L EWE
Sbjct: 302 RLWNRCK-NLRNTLNSSYLCMLSSLVKLDDIEGAEKILQEWE 342
>Medtr1g086820.1 | PPR containing plant protein | HC |
chr1:38878473-38875899 | 20130731
Length = 480
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 176/323 (54%), Gaps = 5/323 (1%)
Query: 22 QLLRLYRSASTTV---TKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVK 78
+LLR +A+T K+ +LY R++ L +V L +++ +G A+ + +L+ V+
Sbjct: 12 RLLRRLCTAATAAELPNKKANLYRRLADLEKTGGTVSQTLNQYIIEGKALGKDELERCVQ 71
Query: 79 TLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKT 138
LR +RF HA ++ EWM + + S + AV L L+ +V G+ AE++F + K
Sbjct: 72 ELRKYRRFHHAFEIMEWMMMRQI-NFSWDNYAVYLDLVSKVKGVVEAENHFNSFPPPAKN 130
Query: 139 EKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCLNYNNIMCLYAQSDQHEKVPGVLAM 198
+ +G+LLNCY + ++DK+LS KM E GY++ L++ N+M +Y + Q KVP ++ +
Sbjct: 131 KYTYGSLLNCYCKELMLDKALSHFDKMDEFGYLTSLSFTNLMSMYMRLSQPSKVPQLVNV 190
Query: 199 MKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
MKE + F+Y + +NS A +DL +E++ EE++RE +DW TYS +A YI+AG
Sbjct: 191 MKERKIRMTEFTYILWMNSCAALNDLGEVERVYEEMKREDEDKIDWKTYSNLAAIYIKAG 250
Query: 259 XXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYI 318
+ R Y+ L+S YAG K + R+W K N Y+
Sbjct: 251 FFEKAELMLKKVEGVMKPRQRETYHFLLSLYAGTGNVKEVYRVWGTLK-KITPVTNRSYL 309
Query: 319 TLLSWLVKLGDLDEAEKLLGEWE 341
+LS L +L D++ KL EWE
Sbjct: 310 IMLSNLRRLNDMEGIIKLFKEWE 332
>Medtr1g072300.2 | PPR containing plant protein | HC |
chr1:32088105-32090245 | 20130731
Length = 512
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 177/323 (54%), Gaps = 8/323 (2%)
Query: 29 SASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEK-QLQLIVKTLRTRKRFT 87
+A+++ + L R+ L P S V + KW ++G+ + K QL +++ LR KR+
Sbjct: 27 TAASSSSGGDTLGRRLLSLVYPKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKNKRYK 86
Query: 88 HALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLN 147
HAL+V EWM + + GD AVQL LI +V GL SAE +F++L D + + ALL+
Sbjct: 87 HALEVCEWMKLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLH 146
Query: 148 CYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSP 206
YV+ L +K+ + M KM E G++ S + YN +M LY + + EKVP + +K + SP
Sbjct: 147 AYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELKVN-TSP 205
Query: 207 DIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXX 266
D+ ++ + + + + +D+E E++L ++ ++ DW+TYST+ YIR
Sbjct: 206 DVVTFNLLLTACASENDVETAERVLLQL-KKAKVDPDWVTYSTLTNLYIRNASVDDCLEK 264
Query: 267 XXXXXDNLDKRSA----VAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLS 322
++KR++ VAY+ L+S +A + + R+W KA + + EY+ ++S
Sbjct: 265 AASTLKEMEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMIS 324
Query: 323 WLVKLGDLDEAEKLLGEWELSDG 345
LVKLGD E L EWE G
Sbjct: 325 SLVKLGDFAGVENLYKEWESVSG 347
>Medtr1g072300.1 | PPR containing plant protein | HC |
chr1:32088105-32090245 | 20130731
Length = 512
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 177/323 (54%), Gaps = 8/323 (2%)
Query: 29 SASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEK-QLQLIVKTLRTRKRFT 87
+A+++ + L R+ L P S V + KW ++G+ + K QL +++ LR KR+
Sbjct: 27 TAASSSSGGDTLGRRLLSLVYPKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKNKRYK 86
Query: 88 HALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLN 147
HAL+V EWM + + GD AVQL LI +V GL SAE +F++L D + + ALL+
Sbjct: 87 HALEVCEWMKLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLH 146
Query: 148 CYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSP 206
YV+ L +K+ + M KM E G++ S + YN +M LY + + EKVP + +K + SP
Sbjct: 147 AYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELKVN-TSP 205
Query: 207 DIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXX 266
D+ ++ + + + + +D+E E++L ++ ++ DW+TYST+ YIR
Sbjct: 206 DVVTFNLLLTACASENDVETAERVLLQL-KKAKVDPDWVTYSTLTNLYIRNASVDDCLEK 264
Query: 267 XXXXXDNLDKRSA----VAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLS 322
++KR++ VAY+ L+S +A + + R+W KA + + EY+ ++S
Sbjct: 265 AASTLKEMEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMIS 324
Query: 323 WLVKLGDLDEAEKLLGEWELSDG 345
LVKLGD E L EWE G
Sbjct: 325 SLVKLGDFAGVENLYKEWESVSG 347
>Medtr1g072300.3 | PPR containing plant protein | HC |
chr1:32088105-32090245 | 20130731
Length = 512
Score = 175 bits (444), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 177/323 (54%), Gaps = 8/323 (2%)
Query: 29 SASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEK-QLQLIVKTLRTRKRFT 87
+A+++ + L R+ L P S V + KW ++G+ + K QL +++ LR KR+
Sbjct: 27 TAASSSSGGDTLGRRLLSLVYPKRSAVIAINKWKEEGHTLPRKYQLNRMIRELRKNKRYK 86
Query: 88 HALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLN 147
HAL+V EWM + + GD AVQL LI +V GL SAE +F++L D + + ALL+
Sbjct: 87 HALEVCEWMKLQNDIKLVEGDYAVQLDLITKVRGLNSAEKFFEDLPDKMRGQPTCTALLH 146
Query: 148 CYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSP 206
YV+ L +K+ + M KM E G++ S + YN +M LY + + EKVP + +K + SP
Sbjct: 147 AYVQNNLTNKAEALMSKMSECGFLRSPVPYNRMMSLYISNGKLEKVPKLFEELKVN-TSP 205
Query: 207 DIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXX 266
D+ ++ + + + + +D+E E++L ++ ++ DW+TYST+ YIR
Sbjct: 206 DVVTFNLLLTACASENDVETAERVLLQL-KKAKVDPDWVTYSTLTNLYIRNASVDDCLEK 264
Query: 267 XXXXXDNLDKRSA----VAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLS 322
++KR++ VAY+ L+S +A + + R+W KA + + EY+ ++S
Sbjct: 265 AASTLKEMEKRTSRETRVAYSSLLSLHANMGNVDEVNRIWGKMKACFCKMSDDEYVCMIS 324
Query: 323 WLVKLGDLDEAEKLLGEWELSDG 345
LVKLGD E L EWE G
Sbjct: 325 SLVKLGDFAGVENLYKEWESVSG 347
>Medtr8g069570.1 | PPR containing plant protein | HC |
chr8:29205146-29209182 | 20130731
Length = 490
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 165/305 (54%), Gaps = 2/305 (0%)
Query: 40 LYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSK 99
LY ++ G ++V L ++++ G + + ++ +K LR RK + AL++SE M+ +
Sbjct: 25 LYLKLFKDGGSELNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYQPALKLSETMAKR 84
Query: 100 GLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSL 159
+ + D+A+ + L+ + G+ +AE YF +L + K +GALLNCY + + DK+
Sbjct: 85 NMIK-TVSDQAIHIDLVAKARGIVAAEKYFVDLPESKKNHLCYGALLNCYCKELMTDKAE 143
Query: 160 SQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSY 218
++KMK++ + +S L+YN++M LY + Q EK+P ++ MK + PD ++Y V + +
Sbjct: 144 GVVEKMKDLDFPLSSLSYNSLMTLYTKVGQPEKIPSIIQEMKSSNIMPDSYTYNVWMRAL 203
Query: 219 GARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRS 278
A +D+ +E++++E++R+G DW TYS +A+ Y+ A +
Sbjct: 204 AAVNDISGVERVIDEMKRDGRVTGDWTTYSNLASIYVDANLFEKAEGALKELEKRNGYKD 263
Query: 279 AVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLG 338
AY LI+ Y + + R+W+ + + N Y+ ++ LV L DL AEK
Sbjct: 264 LSAYQFLITLYGKIGKVYEVYRVWRSLRLAFPKTANISYLNMIQVLVNLKDLPGAEKCFR 323
Query: 339 EWELS 343
EWE S
Sbjct: 324 EWESS 328
>Medtr1g022400.1 | PPR containing plant protein | HC |
chr1:7120844-7118221 | 20130731
Length = 404
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 159/296 (53%), Gaps = 2/296 (0%)
Query: 50 PSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDR 109
P S VL+KWV QGN+I +L+ I K LRT +R+ HAL++SEWM S +S D
Sbjct: 66 PKRSATNVLQKWVLQGNSIPVSELRDISKELRTSQRYKHALEISEWMVSHEEYELSDSDY 125
Query: 110 AVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMG 169
A ++ L+ +V G+++AE YF+ L KT + + ALL+ Y A + +K+ +++K+
Sbjct: 126 ADRIDLMNKVFGIDAAERYFEALPLSAKTCETYTALLHSYAGAKMTEKAEELYERIKDSN 185
Query: 170 Y-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENME 228
+ YN +M LY Q EK+P V+ +K+ V PDIF++ + I+S A +++ +
Sbjct: 186 LPFDAVTYNEMMTLYMSVGQVEKIPSVVEDLKQQKVVPDIFTFNLWISSCAASLNIDEVR 245
Query: 229 KLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDN-LDKRSAVAYNHLIS 287
++LEE+ + W+ Y +A Y AG + + + + Y+ L+
Sbjct: 246 RILEEMRNGAGSDESWIRYLNLANVYFTAGHLDSASSNSLVETEKGITQSQWITYDLLVI 305
Query: 288 HYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELS 343
YAGL K + ++W + ++ ++ YI ++S + L EA +++ +W+ S
Sbjct: 306 LYAGLGNKDKLDQIWNSLRMTKQKMISRNYICIISAYLILDHAKEAGEVIDQWKQS 361
>Medtr3g099753.2 | PPR containing plant-like protein | HC |
chr3:45738160-45740519 | 20130731
Length = 511
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 173/340 (50%), Gaps = 13/340 (3%)
Query: 15 QNLTANFQLLRLYRSASTTVTK----------RRDLYSRISPLGDPSVSVVPVLEKWVQQ 64
+LTA Q + + A T T+ + +L S I+ + + +PVL+ WV Q
Sbjct: 4 HSLTAVIQRISFFLGARTLYTRADSRASAFSDKHNLKSLIARFKPSTQTPLPVLQNWVDQ 63
Query: 65 GNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLES 124
GN + +L+ I + L KR+ HA ++ M ++ I P D A++L LI + GL
Sbjct: 64 GNKLSSSELRCISRRLIKSKRYNHAFELFNCMENQQKFRIKPADHALKLELIAKNCGLME 123
Query: 125 AESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMG-YVSCLNYNNIMCLY 183
AE YF + D + + LL YV K+ + M+K+ E+G V+ YN +M LY
Sbjct: 124 AEEYFMRIPDSAGKKAAYLPLLRGYVGDRDTSKAETFMEKLYELGLVVNAHPYNEMMKLY 183
Query: 184 AQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINS--YGARSDLENMEKLLEEIEREGHTC 241
+ ++ KVP V+ MK + V ++ SY + +++ G R + +E + E++ +
Sbjct: 184 LATCEYWKVPLVIQQMKRNKVPLNVLSYNLWMSACDEGERYGVAAVETVFREMQNDEIVE 243
Query: 242 VDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRL 301
+ W + +T+A Y++AG + L + + Y +I+ YA L+ K+ ++RL
Sbjct: 244 MGWSSLATLANVYMKAGQSEKAILVLKNAEEKLSTCNRLGYFFIITLYASLKQKEGVLRL 303
Query: 302 WKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWE 341
W+ KA R YI +L+ LVKLGD+ +A+++ EWE
Sbjct: 304 WEASKAVGGRISCANYICILTSLVKLGDIAQAKRIFREWE 343
>Medtr3g099753.1 | PPR containing plant-like protein | HC |
chr3:45738160-45740398 | 20130731
Length = 527
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 166/316 (52%), Gaps = 3/316 (0%)
Query: 29 SASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTH 88
S ++ + + +L S I+ + + +PVL+ WV QGN + +L+ I + L KR+ H
Sbjct: 52 SRASAFSDKHNLKSLIARFKPSTQTPLPVLQNWVDQGNKLSSSELRCISRRLIKSKRYNH 111
Query: 89 ALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNC 148
A ++ M ++ I P D A++L LI + GL AE YF + D + + LL
Sbjct: 112 AFELFNCMENQQKFRIKPADHALKLELIAKNCGLMEAEEYFMRIPDSAGKKAAYLPLLRG 171
Query: 149 YVRAGLVDKSLSQMQKMKEMG-YVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPD 207
YV K+ + M+K+ E+G V+ YN +M LY + ++ KVP V+ MK + V +
Sbjct: 172 YVGDRDTSKAETFMEKLYELGLVVNAHPYNEMMKLYLATCEYWKVPLVIQQMKRNKVPLN 231
Query: 208 IFSYRVCINS--YGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXX 265
+ SY + +++ G R + +E + E++ + + W + +T+A Y++AG
Sbjct: 232 VLSYNLWMSACDEGERYGVAAVETVFREMQNDEIVEMGWSSLATLANVYMKAGQSEKAIL 291
Query: 266 XXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLV 325
+ L + + Y +I+ YA L+ K+ ++RLW+ KA R YI +L+ LV
Sbjct: 292 VLKNAEEKLSTCNRLGYFFIITLYASLKQKEGVLRLWEASKAVGGRISCANYICILTSLV 351
Query: 326 KLGDLDEAEKLLGEWE 341
KLGD+ +A+++ EWE
Sbjct: 352 KLGDIAQAKRIFREWE 367
>Medtr8g007375.1 | PPR containing plant-like protein | HC |
chr8:1491114-1492337 | 20130731
Length = 407
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 133/238 (55%), Gaps = 1/238 (0%)
Query: 104 ISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQ 163
IS D A+QL LI RVHG+ SAES+F NL++ K ++ +GALLN YV + +K+ S ++
Sbjct: 10 ISASDVAIQLDLIARVHGVSSAESFFLNLTNDLKDKRTYGALLNAYVHSRSREKAESLLE 69
Query: 164 KMKEMGYVS-CLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARS 222
M+ Y++ L +N +M L ++KV +++ MKE + DI++Y + ++S G++
Sbjct: 70 VMRSKRYLTHSLPFNLMMTLSMNLKDYDKVDMLVSEMKEKNIQLDIYTYNIWLSSCGSQG 129
Query: 223 DLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAY 282
+E ME++ E++ ++ +W T+ST+A YI+ + R V +
Sbjct: 130 SIEKMEQVFEQMLKDPTIIPNWSTFSTMAAMYIKMELFEKAQECLKKAEGRILGRDKVPF 189
Query: 283 NHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEW 340
++L+S Y + K + R+W K+ N Y ++S V++ D++ AEKL EW
Sbjct: 190 HYLLSLYGSVGNKDEVYRVWNNYKSMFPSIPNLGYHAVISSFVRMDDIERAEKLYEEW 247
>Medtr8g031520.1 | PPR containing plant protein | HC |
chr8:11834804-11831456 | 20130731
Length = 300
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 118/195 (60%), Gaps = 2/195 (1%)
Query: 40 LYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSK 99
+Y RIS + +P + VL +W +G + + +L +VK LR ++ ALQV +W++++
Sbjct: 106 IYKRISMMQNPELGSASVLNQWENEGRNLTKWELCRVVKELRKYRKHDRALQVYDWINNR 165
Query: 100 G-LCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKS 158
IS D A+QL LI RVHG+ SAE +F NL++ K ++ +GALLN YV + +K+
Sbjct: 166 PERFRISASDVAIQLDLIARVHGVSSAEGFFLNLTNDLKDKRTYGALLNAYVHSRSREKA 225
Query: 159 LSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINS 217
S ++ M+ Y + L +N +M LY ++KV +++ MKE + DI++Y + ++S
Sbjct: 226 ESLLEVMRSKRYLIHSLPFNLMMTLYMNLKDYDKVDMLVSEMKEKNIRLDIYTYNIWLSS 285
Query: 218 YGARSDLENMEKLLE 232
G++ +E ME++ E
Sbjct: 286 CGSQGSIEKMEQVFE 300
>Medtr7g089770.1 | DNA-binding protein | HC | chr7:35161437-35164842
| 20130731
Length = 623
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 12/289 (4%)
Query: 53 SVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQ 112
++ LEKWV+ G + +++ L + LR RK + ALQ+SEW+ SK D A Q
Sbjct: 171 TIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVERDYASQ 230
Query: 113 LGLIGRVHGLESAESYFQNLSDIDKTEKVHGALL-NCYVRAGLVDKSLSQMQKMKEMGY- 170
L LI ++HGL AE Y + + + + E ++ LL NC + L K+ KMK++ +
Sbjct: 231 LDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNL-KKAEEIFNKMKDLEFP 289
Query: 171 VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKL 230
++ N ++ LY ++D+ +K+ VL +M+++ V P ++++ I+ G +D++ M+++
Sbjct: 290 LTPFACNQLLLLYKRTDK-KKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQI 348
Query: 231 LEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYA 290
++++ EG D T + + YI G K + L++ YA
Sbjct: 349 VDQMRAEG-IEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRLLLALYA 407
Query: 291 GLEMKKAMMRLWKLQKANCKRQLNGE--YITLLSWLVKLGDLDEAEKLL 337
L M + R+WK+ C+ + + E + +W KL +DEAE +
Sbjct: 408 KLGMADEVGRVWKV----CETRPSVEDCVAAIEAW-GKLKKIDEAEAVF 451
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 3/126 (2%)
Query: 117 GRVHGLESAESYFQNLSDIDK-TEKVHGALLNCYVRAGLVDKSLSQMQKMKEMG-YVSCL 174
G++ ++ AE+ F+ ++ K T K LLN Y ++ K +++M G + L
Sbjct: 439 GKLKKIDEAEAVFEVMARKWKLTSKNCSVLLNVYANNKMLTKGKDLIKRMAHKGCRIGPL 498
Query: 175 NYNNIMCLYAQSDQHEKVPGVL-AMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEE 233
+N ++ LY Q+ + EK VL +++ V P SY + Y R D+ N EK+
Sbjct: 499 TWNALVKLYVQAGEVEKADSVLQKAIQQSPVRPIFSSYNTLLEEYSKRGDIHNSEKIFYR 558
Query: 234 IEREGH 239
+++ G+
Sbjct: 559 MKQAGY 564
>Medtr8g059110.1 | PPR containing protein, putative | HC |
chr8:20658039-20658335 | 20130731
Length = 90
Score = 104 bits (260), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/91 (57%), Positives = 70/91 (76%), Gaps = 4/91 (4%)
Query: 3 STPFSAILRHKFQNLTANFQLLRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWV 62
+TPFS IL+ K +N+ A F L + Y S+TV RR+L++RISPLGDPS+S+ P+LE WV
Sbjct: 2 ATPFSTILQ-KSRNIAATFLLCKPY---SSTVRNRRNLFARISPLGDPSISISPILENWV 57
Query: 63 QQGNAIKEKQLQLIVKTLRTRKRFTHALQVS 93
Q+GN + KQLQ I+K+LR+ KRF+ ALQVS
Sbjct: 58 QEGNPLGYKQLQRIIKSLRSSKRFSQALQVS 88
>Medtr1g050750.1 | DNA-binding protein | HC | chr1:19651324-19646399
| 20130731
Length = 557
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 135/271 (49%), Gaps = 7/271 (2%)
Query: 36 KRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEW 95
+R +L+ I + +SV L+KWV++G + +++ L + +LR RK + ALQ +W
Sbjct: 90 RRSELFKAIVSVS--GLSVDSALDKWVEKGKELSRQEIGLALNSLRRRKMYGRALQALDW 147
Query: 96 MSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALL-NCYVRAGL 154
+ S + + A +L LI ++ GL AE Y +++ + + E ++ LL NC L
Sbjct: 148 LESNKKLEFTEKEYASKLDLIAKLRGLPKAEKYLEHVPNSFRGELLYRTLLANCASLENL 207
Query: 155 VDKSLSQMQKMKEMGYVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVC 214
K+ KM+E+G+ N + L + +K+ VL MM+++ V P ++Y++
Sbjct: 208 -RKTEETFNKMRELGFPVTAFACNQLLLIYKKIDKKKIADVLLMMEKENVKPSSYTYKIL 266
Query: 215 INSYGARSDLENMEKLLEEIEREGHTC-VDWMTYSTVATFYIRAGXXXXXXXXXXXXXDN 273
I+ G +D++ M +++E ++ EG C +D +T +++A Y AG
Sbjct: 267 IDVKGLSNDIDGMSQIVETMKAEG--CELDHLTRASLARHYAAAGLTEKTEAILKEIEGE 324
Query: 274 LDKRSAVAYNHLISHYAGLEMKKAMMRLWKL 304
K + L+ YA L + R+WK+
Sbjct: 325 NLKENMWVCPTLLRLYAILGRADEVERIWKV 355
>Medtr2g096880.1 | PPR containing plant-like protein | HC |
chr2:41406598-41409004 | 20130731
Length = 512
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 151/333 (45%), Gaps = 27/333 (8%)
Query: 27 YRSASTTVTKRRD-LYSRIS--PLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTR 83
++ T T+ +D L RI P G+ S+ W++ G ++ + + LR
Sbjct: 32 FKFFCTQTTQNQDSLCKRIEKLPKGE---SIASAFRSWMRDGFPVRGADVFHTINRLRKL 88
Query: 84 KRFTHALQVSEWMSSKGLCPISPG--DRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKV 141
AL+V EW+ + P P D + + ++HG+ E F + + E +
Sbjct: 89 NFNKRALEVMEWVIRER--PYRPRELDYSYLVEFTTKLHGIPHGEKLFTRVPVEFQNELL 146
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ L+ + G+V SL M+KM+E+G+ +S L +N ++ +++ + + + + G+LA MK
Sbjct: 147 YNNLVIACLDKGVVRVSLEYMKKMRELGHPISHLVFNRLIIVHSSASRRKMIHGLLAQMK 206
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXX 260
D V+P + +Y + + +LEN+ + + ++R H + ++Y +AT + A
Sbjct: 207 ADKVTPHVSTYNILMKIEANEHNLENLMRFFDRMKR-VHVEPNEISYCILATAHAVARLY 265
Query: 261 XXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNG----- 315
++ + + L+ Y L +K + R+W + +NG
Sbjct: 266 TATETYVEAVEKSMTGNNWSTLDVLLILYGYLGSRKELERIWSI--------INGLPFVR 317
Query: 316 --EYITLLSWLVKLGDLDEAEKLLGEWELSDGL 346
Y+ + ++G+L+ AE++ E E GL
Sbjct: 318 TKSYLLAIEAFGRIGELNRAEEIWSEMESVKGL 350
>Medtr8g071300.1 | PPR containing plant-like protein | HC |
chr8:30270840-30266726 | 20130731
Length = 647
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 136/307 (44%), Gaps = 16/307 (5%)
Query: 62 VQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHG 121
V+ I + ++++ + + + A++V + M G C + L + +
Sbjct: 176 VENSELISPQVFVILMRRFASARMVSKAIEVLDEMPKYG-CEVDEYVFGCLLDALCKNGS 234
Query: 122 LESAESYFQNLS-DIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNI 179
++ A S F+++ T K +LL + + G + ++ + +MK+ G + +NN+
Sbjct: 235 VKEAASLFEDMRYKFTPTVKHFTSLLYGWCKEGKLVEAKHVLVQMKDAGIEPDIVVFNNL 294
Query: 180 MCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGH 239
+ YAQ+ + +L M+ G P+ SY V I S LE ++ E++R G
Sbjct: 295 LGGYAQAGKMGDAYDLLKEMRRKGCEPNAASYTVLIQSLCKHEKLEEAMRMFVEMQRSGC 354
Query: 240 TCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNH-LISHYAGLEMKKAM 298
+D +TY+T+ + + + G + + Y H +++H E+++ M
Sbjct: 355 Q-MDVITYTTLISGFCKWGKIKRGYELLDQMKQEGHSPNQLTYMHIMVAHEKKEELEECM 413
Query: 299 MRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPSL-------- 350
+ ++QK C LN Y ++ KLG++ + +L E E S GL+P +
Sbjct: 414 ELVNEMQKIGCVPDLN-IYNIVIRLACKLGEVKQGVRLWNEMEAS-GLNPGIDTFVIMIN 471
Query: 351 -FLEISC 356
FLE C
Sbjct: 472 GFLEQEC 478
>Medtr8g103480.2 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 6/207 (2%)
Query: 57 VLEKWVQQGNA-IKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCP--ISPGDRAVQL 113
+LE +Q GN E+ ++++ T+ A V M + G+ P ++ A
Sbjct: 170 LLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229
Query: 114 GLIGRVHGLESAESYFQNLSD-IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMG-YV 171
G E Q ++ + E+ G ++ Y + G + ++L + KMKE+G +
Sbjct: 230 AQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHP 289
Query: 172 SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLL 231
+ + +N+++ Y + V L +M+E G+ PD+ +Y +N++ + ++N E++
Sbjct: 290 NPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIF 349
Query: 232 EEIEREGHTCVDWMTYSTVATFYIRAG 258
+++ + D YS +A Y+RAG
Sbjct: 350 DDMVK-AEIEPDIQAYSILAKGYVRAG 375
>Medtr8g103480.1 | PPR containing plant-like protein | HC |
chr8:43542427-43537111 | 20130731
Length = 584
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 98/207 (47%), Gaps = 6/207 (2%)
Query: 57 VLEKWVQQGNA-IKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCP--ISPGDRAVQL 113
+LE +Q GN E+ ++++ T+ A V M + G+ P ++ A
Sbjct: 170 LLEMMIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAF 229
Query: 114 GLIGRVHGLESAESYFQNLSD-IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMG-YV 171
G E Q ++ + E+ G ++ Y + G + ++L + KMKE+G +
Sbjct: 230 AQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHP 289
Query: 172 SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLL 231
+ + +N+++ Y + V L +M+E G+ PD+ +Y +N++ + ++N E++
Sbjct: 290 NPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIF 349
Query: 232 EEIEREGHTCVDWMTYSTVATFYIRAG 258
+++ + D YS +A Y+RAG
Sbjct: 350 DDMVK-AEIEPDIQAYSILAKGYVRAG 375
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 120/289 (41%), Gaps = 21/289 (7%)
Query: 73 LQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLES--AESYFQ 130
+++K R HAL V + MS G P G R+ L V E A F
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEMSRIGRVP---GLRSCSFLLGKLVQKGEGRVAVMVFD 215
Query: 131 NLSDIDKTEKVH--GALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSD 187
+ V+ ++N + + G VD ++ ++KM + G + + YN ++ Y
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275
Query: 188 QHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTY 247
E V VL +M E GVS ++ + + + Y + ++ EKLL E+E + VD Y
Sbjct: 276 DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVY 335
Query: 248 STVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGL----EMKKAMMRL-- 301
+ Y + G K + V N LI Y L E ++ + +
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395
Query: 302 WKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPSL 350
W L K +C Y TLL + G + +A +L E L DG++P++
Sbjct: 396 WNL-KPDCY-----SYNTLLDGYCREGKVSKA-FMLCEEMLGDGITPTV 437
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 9/227 (3%)
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ L++ Y R +D ++ + +M G + YN ++ ++ + E+V + M
Sbjct: 464 YNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMT 523
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXX 260
E G +P+I +Y I S + LL E++ +G T D +++ T+ T + + G
Sbjct: 524 EKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT-PDVVSFGTLITGFCKVGDL 582
Query: 261 XXXXXXXXXXXDNLD-KRSAVAYNHLISHYA-GLEMKKAMMRLWKLQKANCKRQLNGEYI 318
D + YN +IS ++ L MK A+ +++K C N Y
Sbjct: 583 DGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPD-NYTYR 641
Query: 319 TLLSWLVKLGDLDEAEKLLGEWELSDGLSPSLFL---EISCTCISYK 362
L+ K G++++ K L E + G PSL ++C C+ +K
Sbjct: 642 VLIDGFCKTGNVNQGYKFLLE-NIEKGFIPSLTTFGRVLNCLCVEHK 687
>Medtr4g107210.1 | PPR containing plant-like protein | HC |
chr4:44279533-44285674 | 20130731
Length = 862
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/310 (21%), Positives = 130/310 (41%), Gaps = 11/310 (3%)
Query: 40 LYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSK 99
L +R+S L P S+ L+ + N + ++ K R + +L++ ++M +
Sbjct: 76 LINRLSSL-PPRGSIARCLDSF---KNKLSLNDFAVVFKEFAQRGDWQRSLRLFKYMQRQ 131
Query: 100 GLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSD--IDKTEKVHGALLNCYVRAGLVDK 157
C + + + L+GR L+ F + + ++ + A++N Y R G
Sbjct: 132 IWCKPNEHIYTIIITLLGREGLLDKCREVFDEMPSQGVARSVFAYTAVINAYGRNGQFQT 191
Query: 158 SLSQMQKMK-EMGYVSCLNYNNIMCLYAQSD-QHEKVPGVLAMMKEDGVSPDIFSYRVCI 215
S+ ++ MK E S L YN ++ A+ E + G+ A M+ +G+ PD+ +Y +
Sbjct: 192 SVELLESMKQERVSPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDVITYNTLL 251
Query: 216 NSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLD 275
++ R + E + + EG D TYS + + +
Sbjct: 252 SACAHRGLGDEAEMVFRTM-NEGGVVPDINTYSYLVHTFGKLNKLEKVSELLREMESGGS 310
Query: 276 KRSAVAYNHLISHYAGLEMKKAMMRLWK-LQKANCKRQLNGEYITLLSWLVKLGDLDEAE 334
+YN L+ YA + K + +++ +Q+A C + Y LL+ K G D+
Sbjct: 311 LPDVSSYNVLLEAYADMGFIKESIGVFRQMQEAGCVPN-SATYSILLNLYGKHGRYDDVR 369
Query: 335 KLLGEWELSD 344
L E ++S+
Sbjct: 370 DLFLEMKVSN 379
>Medtr7g091410.1 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 830
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 7/219 (3%)
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ ALL Y G+ +++L ++K+ G+ ++Y +++ Y +S + +K + M+K
Sbjct: 365 YNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIK 424
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREG-HTCVDWMTYSTVATFYIRAGX 259
+ + P+I SY I++YG+ LE+ ++L E+E++ H V ++ T+ R G
Sbjct: 425 RNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNV--VSICTLLAACGRCGQ 482
Query: 260 XXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGL-EMKKAMMRLWKLQKANCKRQLNGEYI 318
K + VAYN I Y + E KA+ ++K K + Y
Sbjct: 483 KVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSD-SVTYT 541
Query: 319 TLLSWLVKLGDLDEAEKLLGE-WELSDGLSPSLFLEISC 356
L+S K+ EA + E L +S ++ I C
Sbjct: 542 VLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIIC 580
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 7/207 (3%)
Query: 89 ALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL--SDIDKTEKVHGALL 146
AL V + M+ G+ P + L A SYF+ + + I H ++
Sbjct: 239 ALNVCKKMTDNGVGP-DLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIII 297
Query: 147 NCYVRAGLVDKSLSQMQKMKEMG---YVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDG 203
+C V+ DK++ MKE + + + +++ LY+ E MM +G
Sbjct: 298 HCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEG 357
Query: 204 VSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXX 263
+ P+I SY + +Y AR ++ EI++ G D ++Y+++ Y R+
Sbjct: 358 LKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFR-PDVVSYTSLLNAYGRSRKPQKA 416
Query: 264 XXXXXXXXDNLDKRSAVAYNHLISHYA 290
N K + V+YN LI Y
Sbjct: 417 REIFKMIKRNNLKPNIVSYNALIDAYG 443
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 165 MKEMGYVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDL 224
MK+ + + YN++M Y Q K + +M + GV+PD++SY + IN + +
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354
Query: 225 ENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNH 284
+ KL EE+ + + +TY+++ ++G D + + YN
Sbjct: 355 DEAMKLFEEMHCK-QIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413
Query: 285 LISHYA-GLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELS 343
++ + KA++ L K+++ + + Y L++ L K+G LD+A+K+ E L
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDI-FTYTVLINGLCKVGRLDDAQKVF-EDLLV 471
Query: 344 DGLSPSLF 351
G SP+++
Sbjct: 472 KGYSPNIY 479
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 15/188 (7%)
Query: 100 GLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSL 159
G C I D A++L +H + F N+ + +L++ ++G +L
Sbjct: 347 GFCKIKMVDEAMKL--FEEMH----CKQIFPNVV-------TYNSLVDGLCKSGRTSCAL 393
Query: 160 SQMQKMKEMGYVS-CLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSY 218
+ +M + G S + YN+I+ +++ +K +L +KE G+ PDIF+Y V IN
Sbjct: 394 ELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGL 453
Query: 219 GARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRS 278
L++ +K+ E++ +G++ + TY+++ + G DN +
Sbjct: 454 CKVGRLDDAQKVFEDLLVKGYS-PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPN 512
Query: 279 AVAYNHLI 286
A+ Y LI
Sbjct: 513 AITYEILI 520
>Medtr7g091410.4 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 585
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ ALL Y G+ +++L ++K+ G+ ++Y +++ Y +S + +K + M+K
Sbjct: 120 YNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIK 179
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREG-HTCVDWMTYSTVATFYIRAGX 259
+ + P+I SY I++YG+ LE+ ++L E+E++ H V ++ T+ R G
Sbjct: 180 RNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNV--VSICTLLAACGRCGQ 237
Query: 260 XXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGL-EMKKAMMRLWKLQKANCKRQLNGEYI 318
K + VAYN I Y + E KA+ ++K K + Y
Sbjct: 238 KVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSD-SVTYT 296
Query: 319 TLLSWLVKLGDLDEAEKLLGE-WELSDGLSPSLFLEISCT 357
L+S K+ EA + E L +S ++ I C
Sbjct: 297 VLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICA 336
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
Query: 125 AESYFQNL--SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMG---YVSCLNYNNI 179
A SYF+ + + I H +++C V+ DK++ MKE + + + ++
Sbjct: 29 ALSYFELIKGTHIRPDTTTHNIIIHCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSM 88
Query: 180 MCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGH 239
+ LY+ E MM +G+ P+I SY + +Y AR ++ EI++ G
Sbjct: 89 IHLYSVCGHIENCEAAFNMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGF 148
Query: 240 TCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYA 290
D ++Y+++ Y R+ N K + V+YN LI Y
Sbjct: 149 R-PDVVSYTSLLNAYGRSRKPQKAREIFKMIKRNNLKPNIVSYNALIDAYG 198
>Medtr7g091410.3 | PPR containing plant-like protein | HC |
chr7:36127881-36120598 | 20130731
Length = 626
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ ALL Y G+ +++L ++K+ G+ ++Y +++ Y +S + +K + M+K
Sbjct: 161 YNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIK 220
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREG-HTCVDWMTYSTVATFYIRAGX 259
+ + P+I SY I++YG+ LE+ ++L E+E++ H V ++ T+ R G
Sbjct: 221 RNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNV--VSICTLLAACGRCGQ 278
Query: 260 XXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGL-EMKKAMMRLWKLQKANCKRQLNGEYI 318
K + VAYN I Y + E KA+ ++K K + Y
Sbjct: 279 KVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSD-SVTYT 337
Query: 319 TLLSWLVKLGDLDEAEKLLGE-WELSDGLSPSLFLEISCT 357
L+S K+ EA + E L +S ++ I C
Sbjct: 338 VLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICA 377
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 7/207 (3%)
Query: 89 ALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL--SDIDKTEKVHGALL 146
AL V + M+ G+ P + L A SYF+ + + I H ++
Sbjct: 35 ALNVCKKMTDNGVGP-DLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIII 93
Query: 147 NCYVRAGLVDKSLSQMQKMKEMG---YVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDG 203
+C V+ DK++ MKE + + + +++ LY+ E MM +G
Sbjct: 94 HCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEG 153
Query: 204 VSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXX 263
+ P+I SY + +Y AR ++ EI++ G D ++Y+++ Y R+
Sbjct: 154 LKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFR-PDVVSYTSLLNAYGRSRKPQKA 212
Query: 264 XXXXXXXXDNLDKRSAVAYNHLISHYA 290
N K + V+YN LI Y
Sbjct: 213 REIFKMIKRNNLKPNIVSYNALIDAYG 239
>Medtr7g091410.2 | PPR containing plant-like protein | HC |
chr7:36127168-36120598 | 20130731
Length = 691
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 7/220 (3%)
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
+ ALL Y G+ +++L ++K+ G+ ++Y +++ Y +S + +K + M+K
Sbjct: 226 YNALLGAYAARGMENEALQVFNEIKQNGFRPDVVSYTSLLNAYGRSRKPQKAREIFKMIK 285
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREG-HTCVDWMTYSTVATFYIRAGX 259
+ + P+I SY I++YG+ LE+ ++L E+E++ H V ++ T+ R G
Sbjct: 286 RNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDKIHPNV--VSICTLLAACGRCGQ 343
Query: 260 XXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGL-EMKKAMMRLWKLQKANCKRQLNGEYI 318
K + VAYN I Y + E KA+ ++K K + Y
Sbjct: 344 KVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKKIKSD-SVTYT 402
Query: 319 TLLSWLVKLGDLDEAEKLLGE-WELSDGLSPSLFLEISCT 357
L+S K+ EA + E L +S ++ I C
Sbjct: 403 VLISGCCKMSKFGEALSFMEEMMHLKLPMSKEVYSSIICA 442
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 85/207 (41%), Gaps = 7/207 (3%)
Query: 89 ALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL--SDIDKTEKVHGALL 146
AL V + M+ G+ P + L A SYF+ + + I H ++
Sbjct: 100 ALNVCKKMTDNGVGP-DLVTHNIMLTAFKSGTQYSKALSYFELIKGTHIRPDTTTHNIII 158
Query: 147 NCYVRAGLVDKSLSQMQKMKEMG---YVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDG 203
+C V+ DK++ MKE + + + +++ LY+ E MM +G
Sbjct: 159 HCLVKLKQYDKAVDIFNSMKEKKSECHPDVVTFTSMIHLYSVCGHIENCEAAFNMMLAEG 218
Query: 204 VSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXX 263
+ P+I SY + +Y AR ++ EI++ G D ++Y+++ Y R+
Sbjct: 219 LKPNIVSYNALLGAYAARGMENEALQVFNEIKQNGFR-PDVVSYTSLLNAYGRSRKPQKA 277
Query: 264 XXXXXXXXDNLDKRSAVAYNHLISHYA 290
N K + V+YN LI Y
Sbjct: 278 REIFKMIKRNNLKPNIVSYNALIDAYG 304
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 134/312 (42%), Gaps = 21/312 (6%)
Query: 50 PSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDR 109
P S+V +++++ EK ++ + + F ++V +++ KGL I
Sbjct: 128 PVSSIVDLVDEFESH---FVEKFCDMLFRVCSDNRLFDETIRVYDYVEEKGLV-IEERSC 183
Query: 110 AVQLGLIGRVHGLESAESYFQNLSDIDKTE-KVHGA--LLNCYVRAGLVDKSLSQMQKMK 166
V L + R ++ +F + + +K E +V +++ R G V+K+ M +M
Sbjct: 184 FVLLLALKRCGEVDFCVRFFHRMVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMV 243
Query: 167 EMGYV--SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDL 224
G V + YN ++ Y + V +L +M+++ V + +Y + I Y + D+
Sbjct: 244 GKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDI 303
Query: 225 ENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNH 284
E EK+ EE+ RE + +D YS++ ++ R G D + +R V H
Sbjct: 304 EEAEKIFEEM-REKNIEMDVYVYSSMISWSRRLG----NMKRAFALFDEMSQRDIVPNAH 358
Query: 285 LISHYAG-----LEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGE 339
G +M+ A + L ++Q L + T + + G +DEA +L
Sbjct: 359 TYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVI-FNTTMDGYCRRGKMDEALRLQAI 417
Query: 340 WELSDGLSPSLF 351
E G++ +F
Sbjct: 418 ME-KKGINADVF 428
>Medtr1g033840.1 | PPR containing plant-like protein | HC |
chr1:12239375-12241751 | 20130731
Length = 605
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 45 SPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHA-LQVSEWMSSKGLCP 103
+ + DP V + V+ ++++G L+ KTL + A ++VS+ + LC
Sbjct: 326 TTIKDPEVYLKIVI-MYIEEG---------LLEKTLEVVEAMKDADVKVSDCI----LCA 371
Query: 104 ISPGDRAVQLGLIGRVHGLESAESYFQNL--SDIDKTEKVHGALLNCYVRAGLVDKSLSQ 161
I G + G S F+ L + + + +++N Y R G K+
Sbjct: 372 IING--------CSKRRGFSSTVKIFEKLILKGYEPGQVTYASMINVYCRLGQNIKAEKI 423
Query: 162 MQKMKEMGYVSCL-NYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGA 220
+M + G+ C+ Y++++ +Y ++ + ++A MKE G P+++ Y I+ +G
Sbjct: 424 FDEMMQKGFDKCVVAYSSMIVMYGRTGRLRNAMKLVAKMKEKGCKPNVWIYNSLIDMHGK 483
Query: 221 RSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRA 257
+L +EKL E++R D +TY+++ Y +A
Sbjct: 484 EKNLRQIEKLWNEMKRR-KVAPDKITYTSIIGAYCKA 519
>Medtr7g056613.1 | PPR containing plant-like protein | HC |
chr7:20228007-20222513 | 20130731
Length = 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 85 RFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSD---IDKTEKV 141
R+ AL+V E + + PG + ++G+ E A FQ + D + E
Sbjct: 129 RWESALKVFELLREQLWYRPYPGVYIKLIVMLGKCKQPEKAFELFQAMVDEGCVLDCES- 187
Query: 142 HGALLNCYVRAGLVDKSLSQMQKMKEM-GYVSCLNYNNIM---CLYAQSDQHEKVPGVLA 197
+ ALL+ Y R+GL+DK+LS +++MK G + +I+ CL Q +KV +L+
Sbjct: 188 YTALLSAYGRSGLLDKALSLLEEMKSTPGCQPDIQTYSILIKSCL--QVFAFDKVQSLLS 245
Query: 198 MMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVD-WMTYSTVATF 253
M G+ P+ +Y I++YG ME L E+ E + D W ST+ F
Sbjct: 246 DMATHGIKPNTVTYNTLIDAYGKAKRFSEMESTLLEMLAEQNCEPDVWTMNSTLRAF 302
>Medtr3g115270.1 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 132 LSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHE 190
+S + + +++ + + +D +++ ++M G + +N ++ + +S +H
Sbjct: 414 MSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHS 473
Query: 191 KVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTV 250
+ + M++ G SP + +Y + INS GA+ E + LL +++ +G + +TY+T+
Sbjct: 474 RAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQG-LLPNAVTYTTL 532
Query: 251 ATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYA 290
Y ++G K ++ YN LI+ YA
Sbjct: 533 VDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYA 572
>Medtr3g115270.2 | PPR containing plant-like protein | HC |
chr3:53902855-53905578 | 20130731
Length = 685
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 76/160 (47%), Gaps = 2/160 (1%)
Query: 132 LSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHE 190
+S + + +++ + + +D +++ ++M G + +N ++ + +S +H
Sbjct: 414 MSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHS 473
Query: 191 KVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTV 250
+ + M++ G SP + +Y + INS GA+ E + LL +++ +G + +TY+T+
Sbjct: 474 RAEELFEEMQQSGYSPCVMTYNIMINSMGAQERWERVNDLLSKMQSQG-LLPNAVTYTTL 532
Query: 251 ATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYA 290
Y ++G K ++ YN LI+ YA
Sbjct: 533 VDIYGKSGRFNDAIECLEVLKSMGFKPTSTMYNALINAYA 572
>Medtr2g102210.1 | PPR containing plant-like protein | HC |
chr2:43984589-43987676 | 20130731
Length = 639
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 101/245 (41%), Gaps = 14/245 (5%)
Query: 21 FQLLRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKEKQLQLIVKTL 80
F+ +RL VT + S PS LE+ + G +++
Sbjct: 359 FEEMRLLNCTPNVVTYNTIIKSLFEDKAPPS-EASSWLERMKKDGVVPSSFTYSILIDGF 417
Query: 81 RTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDI--DKT 138
R AL + E M KG P P + +G+ E+A FQ L + +
Sbjct: 418 CKTNRVEKALLLLEEMDEKGF-PPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSS 476
Query: 139 EKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLA 197
+V+ ++ + + G ++++ +MK++G + YN ++ ++D ++ +
Sbjct: 477 VRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFR 536
Query: 198 MMKEDGVSPDIFSYRVCINSY----GARSDLENMEKLLEEIEREGHTCVDWMTYSTVATF 253
M+E+G +PDI S+ + +N G + +E K+ + D ++Y+TV
Sbjct: 537 TMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKM-----KSSTIKPDAVSYNTVLGC 591
Query: 254 YIRAG 258
RAG
Sbjct: 592 LSRAG 596
>Medtr3g083680.1 | PPR containing plant-like protein | HC |
chr3:37762257-37764734 | 20130731
Length = 684
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 74/160 (46%), Gaps = 4/160 (2%)
Query: 102 CPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKV--HGALLNCYVRAGLVDKSL 159
CPI + + + G++ ++ A+ +F + + V + +L Y AGL +++
Sbjct: 332 CPIDLTTCNIMIDVYGQLQMIKEADCFFWGMRKMGIEPNVVSYNTVLRVYGEAGLFGEAV 391
Query: 160 SQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSY 218
M+ G + + YN ++ +Y +S +H+K ++ M+ G+ P+ +Y I+ +
Sbjct: 392 HLFSLMQMKGVPQNVVTYNTMISIYGKSLEHDKATNLIQEMQSRGIQPNAITYSTIISIW 451
Query: 219 GARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
L+ L ++ G +D + Y T+ Y +AG
Sbjct: 452 EKAGKLDRAAMLFHKLRTSG-VKIDEILYQTMIVAYQKAG 490
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 125/311 (40%), Gaps = 14/311 (4%)
Query: 57 VLEKWVQQGNAIKEKQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLI 116
V + ++ G A I+ T + + AL + M S G+ P + + +G +
Sbjct: 657 VCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIMP-NAVTYNILIGGL 715
Query: 117 GRVHGLESAESYFQNL--SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSC 173
+ +E AES + + T H L+ Y R+ DK L +K+ G +S
Sbjct: 716 CKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELSL 775
Query: 174 LNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEE 233
YN ++ ++ + K VL M + G+S D+ +Y I Y S +E K +
Sbjct: 776 TVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQ 835
Query: 234 IEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKR----SAVAYNHLISHY 289
+ +G + TY+T+ AG +++R +A Y+ L+S Y
Sbjct: 836 MFVDG-IAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGY 894
Query: 290 A--GLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLS 347
G K ++ + + K Y L+S K G + EA +LL + L+ G
Sbjct: 895 GRVGNRKKTIILHIEMITKGFVPTL--KTYNVLISDYAKSGKMIEARELLNDL-LTKGRI 951
Query: 348 PSLFLEISCTC 358
P+ F TC
Sbjct: 952 PNSFTYDILTC 962
>Medtr3g053780.1 | PPR containing plant-like protein | HC |
chr3:16842247-16843537 | 20130731
Length = 364
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 140 KVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCL-NYNNIMCLYAQSDQHEKVPGVLAM 198
+ + ++L+ Y + +D S ++ MKE Y S L YN ++ +Y++ E+V VLA
Sbjct: 229 EAYNSMLDAYGKDSQMDAFRSVLKMMKESNYASDLYTYNTVINIYSEQSWIEEVSDVLAE 288
Query: 199 MKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTV 250
+ E G+ PD SY I +YG E +L++E+ + G +D TY+ +
Sbjct: 289 LNECGLRPDFCSYNTLIKAYGIAGVDEEAVELIKEMRKNGIE-LDETTYTNL 339
>Medtr4g098660.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:40679471-40676723 | 20130731
Length = 715
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 144/343 (41%), Gaps = 23/343 (6%)
Query: 11 RHKFQNLTANFQLLRLYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKWVQQGNAIKE 70
RHK +++ N QL R A +R +S + + + + + +GNA+
Sbjct: 110 RHKRSSVSYNPQLREFQRFA------QRLNNCDVSSSDEEFMVCLEEIPSSLTRGNAL-- 161
Query: 71 KQLQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLI--GRVHGL--ESAE 126
L++ +LR ++ TH W+ ++ L P+ V + + GR G+ E A
Sbjct: 162 ----LVLNSLRPWQK-THMF--FNWIKTQNLLPMETIFYNVTMKSLRFGRQFGIIEELAH 214
Query: 127 SYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSC-LNYNNIMCLYAQ 185
++D + +++C + L DK++ ++M + G + + ++ I+ +YA+
Sbjct: 215 QMIDGGVELDNI--TYSTIISCAKKCNLFDKAVYWFERMYKTGLMPDEVTFSAILDVYAR 272
Query: 186 SDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWM 245
+ E+V + + G PD ++ V +G D + + +L+E++ G + +
Sbjct: 273 LGKVEEVVNLFERGRATGWKPDPITFSVLGKMFGEAGDYDGIRYVLQEMKSLG-VQPNLV 331
Query: 246 TYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQ 305
Y+T+ +AG D+ + +I Y K + LWK
Sbjct: 332 VYNTLLEAMGKAGKPGFARSLFEEMIDSGIAPNEKTLTAVIKIYGKARWSKDALELWKRM 391
Query: 306 KANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSP 348
K N Y TLL+ +G ++EAE L + + S+ P
Sbjct: 392 KENGWPMDFILYNTLLNMCADVGLIEEAETLFRDMKQSEHCKP 434
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 12/273 (4%)
Query: 73 LQLIVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL 132
+ + L R ALQ+ + M KG P + + + +V + ++ L
Sbjct: 118 FNIYLNILCRENRLETALQLFQTMPLKGRKP-DVVSYTIIIDALCKVKRFDEVVHVWRKL 176
Query: 133 SD--IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQH 189
D + KV AL+ G VD + + + G V+CL YN ++ + + +
Sbjct: 177 IDSGLKPDFKVCAALVVGLCSGGYVDLAYELVVGVISGGVEVNCLVYNALIHGFYKMGKK 236
Query: 190 EKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYST 249
+K + M ++G +PD+ +Y + +N ++ E+L+E +ER G D +Y+
Sbjct: 237 DKAEAIRGFMSKNGCAPDLVTYNILLNYGCDEVTVDEAERLVETMERSGMA--DLYSYNE 294
Query: 250 VATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANC 309
+ + +A + AV+YN +I + + + R ++L + C
Sbjct: 295 LLKAFCKAYQVDRAYLYMVNKMQSKGVCDAVSYNTIIVAFCKVRRTE---RAYELYEEMC 351
Query: 310 KRQLNGEYIT---LLSWLVKLGDLDEAEKLLGE 339
++ + + +T L+ ++ G + A KLL E
Sbjct: 352 RKGIQPDVVTFTVLIKAFLRKGGSNVANKLLVE 384
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 8/204 (3%)
Query: 140 KVHGALLNCYV----RAGLVDKSLSQMQKMKEMGYVSCLN-YNNIMCLYAQSDQHEKVPG 194
+ H LL V ++ L+ ++ ++KE G L N ++ +Y + K
Sbjct: 624 ETHPVLLKTLVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANE 683
Query: 195 VLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFY 254
+L M E+G +P + +Y + Y + E++L E+ ++G D ++Y+TV Y
Sbjct: 684 ILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKP-DKVSYNTVIYAY 742
Query: 255 IRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEM-KKAMMRLWKLQKANCKRQL 313
R G D+ + V YN ++ YA M +A+ + + K C+
Sbjct: 743 CRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQ 802
Query: 314 NGEYITLLSWLVKLGDLDEAEKLL 337
N Y +++ W K DEA +
Sbjct: 803 N-TYNSIIDWYCKHNRQDEANSFV 825
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 8/204 (3%)
Query: 140 KVHGALLNCYV----RAGLVDKSLSQMQKMKEMGYVSCLN-YNNIMCLYAQSDQHEKVPG 194
+ H LL V ++ L+ ++ ++KE G L N ++ +Y + K
Sbjct: 624 ETHPVLLKTLVLVSSKSDLLMETERAFFELKERGITPGLTTLNAMISIYGRKQVVSKANE 683
Query: 195 VLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFY 254
+L M E+G +P + +Y + Y + E++L E+ ++G D ++Y+TV Y
Sbjct: 684 ILNFMYENGFTPSLTTYNSLMYMYSRSDKFQKSEEILREVLKKGMKP-DKVSYNTVIYAY 742
Query: 255 IRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEM-KKAMMRLWKLQKANCKRQL 313
R G D+ + V YN ++ YA M +A+ + + K C+
Sbjct: 743 CRNGRMKEALRMFSEMKDSALVPNVVTYNTFVATYAADSMFVEAIDVIRYMIKQGCRPDQ 802
Query: 314 NGEYITLLSWLVKLGDLDEAEKLL 337
N Y +++ W K DEA +
Sbjct: 803 N-TYNSIIDWYCKHNRQDEANSFV 825
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 128/297 (43%), Gaps = 20/297 (6%)
Query: 58 LEKWVQQGNAIK----EKQLQLIVKTLRTRKRFTHALQVSEWM-SSKGLCPISPGDRAVQ 112
L ++ N++K E + ++K L + A + EW+ + G + D++V+
Sbjct: 147 LNDLIEFFNSVKGELLESDITGLLKGLDLSGNWERAFLLFEWVWLNFGSENMKVDDQSVE 206
Query: 113 LGLIGRVHGLESAESYFQNLSDIDKTE------KVHGALLNCYVRAGLVDKSLSQMQKMK 166
+ ++ G ES S L DI E K +L+ Y R G +++ +KMK
Sbjct: 207 FMV--KMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMK 264
Query: 167 EMGYVSCL-NYNNIMCLYAQSDQH-EKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDL 224
E G L YN ++ +Y + + + +L M+ G+ D F+ I++ G L
Sbjct: 265 ETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGIL 324
Query: 225 ENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNH 284
+ + ++++ G+ TY+++ + +AG DN + A+ YN
Sbjct: 325 DEARRFFDDLKLNGYK-PGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNE 383
Query: 285 LISHY--AGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLGDLDEAEKLLGE 339
L++ Y AG + A + K + Y T+++ K GD D+A ++ G+
Sbjct: 384 LVAAYVRAGFHDEGAAVIDTMASKGVMPNAIT--YTTVINAYGKAGDADKALEVFGQ 438
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 7/165 (4%)
Query: 90 LQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL--SDIDKTEKVHGALLN 147
L++ + M SKGL + GR L+ A +F +L + + ++L
Sbjct: 293 LELLDEMRSKGL-EFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQ 351
Query: 148 CYVRAGLVDKSLSQMQKMKEMG-YVSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSP 206
+ +AG+ ++L+ +++M++ + YN ++ Y ++ H++ V+ M GV P
Sbjct: 352 VFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMP 411
Query: 207 DIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCV-DWMTYSTV 250
+ +Y IN+YG D + ++ +++ G CV + TY+ V
Sbjct: 412 NAITYTTVINAYGKAGDADKALEVFGQMKELG--CVPNVCTYNNV 454
>Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:41625715-41628184 | 20130731
Length = 796
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 119/281 (42%), Gaps = 47/281 (16%)
Query: 84 KRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHG 143
+ + A+ + +M S+G+ P S + + G +E AE YF ++ D ++ +++
Sbjct: 489 RHVSEAMDLLNYMDSQGVKPNSTTHKIIIEGFCSE-GKIEEAEGYFNSMKD--ESVEIYT 545
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGYV----SCLN------YNNIMCLYAQSDQHEKVP 193
A+++ Y A L++KS ++ G SCL Y+ ++ Q ++
Sbjct: 546 AMVSGYCEADLIEKSYELFHELSNRGDTAQESSCLKQLSKVLYSKVLAELCQKGNMQRAR 605
Query: 194 GVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATF 253
+ G +PD+ +Y + I SY + L+ L ++++ G D +TY+ +
Sbjct: 606 SLFDFFLGRGFTPDVVTYTIMIKSYCTMNCLQEAHDLFQDMKSRG-IKPDVITYTVL--- 661
Query: 254 YIRAGXXXXXXXXXXXXXDNLDKRS--AVAYNHLIS-HYAGLEMKKAMMRLWKLQKANCK 310
LD +S A + H S H G + + +W+ K
Sbjct: 662 --------------------LDGKSKQARSKEHFSSQHGKGKDAPYDVSTIWRDMK---D 698
Query: 311 RQLNGE---YITLLSWLVKLGDLDEAEKLLGEWELSDGLSP 348
R+++ + Y L+ +K+ + ++A +L E + GL P
Sbjct: 699 REVSPDVVIYTVLIDGHIKVDNFEDAIRLFNEV-MKRGLEP 738
>Medtr7g044790.1 | PPR containing plant-like protein | HC |
chr7:15059729-15056941 | 20130731
Length = 721
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 11/191 (5%)
Query: 76 IVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL--- 132
+ +TLR K T A W+ KG +P + L ++GR L A ++ ++
Sbjct: 88 VFQTLRHIKVPTKAFLFFNWIHEKGFSH-NPQTYFIMLEILGREKNLNIARNFLYSIEKR 146
Query: 133 --SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQH 189
++ ++ +L+ Y AGL +S+ + MK +G + +N+++ + + +
Sbjct: 147 SNGEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRT 206
Query: 190 EKVPGVL-AMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTC-VDWMTY 247
V M+K GV PD ++Y + I + S ++ +E+ C D +TY
Sbjct: 207 NMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEM--TSFDCDPDVVTY 264
Query: 248 STVATFYIRAG 258
+T+ RAG
Sbjct: 265 NTLVDGLCRAG 275
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 111/268 (41%), Gaps = 11/268 (4%)
Query: 76 IVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLG--LIGRVHGLESAESYFQN-- 131
I+ ++ K A + M SKG+ P A+ G ++G+ L A F
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGK---LNDAIDLFNKMI 287
Query: 132 LSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHE 190
L +I L+N + + G + + + M + G + + YN++M Y +
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 191 KVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTV 250
K + M + GV+PDI SY + IN + + L +E+ R+ + D +TYS++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTYSSL 406
Query: 251 ATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGL-EMKKAMMRLWKLQKANC 309
++G D + YN ++ + ++ KA+ L KL+
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGI 466
Query: 310 KRQLNGEYITLLSWLVKLGDLDEAEKLL 337
+ + Y L+ L + G L++A K+
Sbjct: 467 QPNMY-TYSILIKGLCQSGKLEDARKVF 493
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 102/254 (40%), Gaps = 18/254 (7%)
Query: 88 HALQVSEWMSS---KGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEKVHGA 144
+ QV EW + GLC + ++A ++ + LES + + + +
Sbjct: 316 NGTQVDEWTCNALLNGLCKVGKVEKAKEI-----LAKLES--------NGVVPSPVSYNI 362
Query: 145 LLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDG 203
L+N Y + G ++K + ++M++ G S + +N ++ + ++ + + M E G
Sbjct: 363 LVNAYCQKGDLNKGILTAEEMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKG 422
Query: 204 VSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXX 263
VSP + +Y IN YG D ++ EEIE +G + +Y ++ + G
Sbjct: 423 VSPTLETYNSLINGYGMTCDFVRCFEIFEEIENKGMK-PNVKSYGSLINCLCKDGKLLDA 481
Query: 264 XXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSW 323
+A YN LI L K R N Y TL++
Sbjct: 482 EIVLGDMVTRGVSPNADIYNMLIEASCSLSKPKDAFRFLNEMIQNGIDATIVTYNTLING 541
Query: 324 LVKLGDLDEAEKLL 337
+ K G + EAE L
Sbjct: 542 IGKNGRVTEAENLF 555
>Medtr5g008300.1 | PPR containing plant-like protein | HC |
chr5:1729882-1736023 | 20130731
Length = 1508
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 94/218 (43%), Gaps = 4/218 (1%)
Query: 141 VHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCLNYNNIMCLYAQSDQHEKVPGVLAMMK 200
++ + +C +GL + L ++ K + + YN ++ ++ ++ GV + M+
Sbjct: 306 INAKVKSCATVSGLAIELLDEVGKFGLRPDI--ITYNTLISACSRESNLKEAIGVFSHME 363
Query: 201 EDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXX 260
+ PD+++Y I+ YG E L E+++ G + D +TY+++ + + G
Sbjct: 364 SNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSP-DAVTYNSLLYAFSKEGNT 422
Query: 261 XXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITL 320
+ + YN +I Y +RL++ K++ + Y L
Sbjct: 423 EKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVL 482
Query: 321 LSWLVKLGDLDEAEKLLGEWELSDGLSPSLFLEISCTC 358
+ L K ++EA K++ E L G+ P+L + C
Sbjct: 483 IDLLGKASKIEEASKVMSEM-LDAGVKPTLHTYSALIC 519
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 98/226 (43%), Gaps = 8/226 (3%)
Query: 113 LGLIGRVHGLESAESYFQNL--SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY 170
+ + GR AE F+ L + + +LL + + G +K ++M +MG+
Sbjct: 378 ISVYGRCGFALKAEHLFEKLKSNGFSPDAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGF 437
Query: 171 -VSCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEK 229
+ YN I+ +Y + +H++ + MK G +PD +Y V I+ G S +E K
Sbjct: 438 GKDEMTYNTIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASK 497
Query: 230 LLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHY 289
++ E+ G TYS + Y + G ++ K +AY+ ++ +
Sbjct: 498 VMSEMLDAGVKPT-LHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFF 556
Query: 290 AGL-EMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVK--LGDLDE 332
E+KKA ++ +A G Y +L LV+ +GD+ E
Sbjct: 557 LRFNEIKKAAALYQEMIEAGFTPD-TGLYEVMLPALVRENMGDVIE 601
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 110/283 (38%), Gaps = 69/283 (24%)
Query: 39 DLYSRISPLGDPSV-----SVVPVLEKWVQQGNAIKEKQLQLIVK------TLRTRK--- 84
+LY I L D + S++ +LE + Q GN + +++ +K T+ +
Sbjct: 877 ELYVVIQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNGMKAAGYFPTMHLYRLMI 936
Query: 85 ----RFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNL-------- 132
RF V +S G P L + V L S+ FQN+
Sbjct: 937 GLLCRFKRVRDVRVMLSEMGEAGFKP-----DLQIFNSVLKLYSSIEEFQNMGVIYQMIQ 991
Query: 133 -SDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMG-------YVSCLN--------- 175
+ + E+ + L+ Y R ++ LS M KMK +G Y S +
Sbjct: 992 DAGLAPDEETYNTLITMYCRDHRPEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYD 1051
Query: 176 --------------------YNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCI 215
Y+ +M +Y S H+K +L +MKE G+ P+ + + +
Sbjct: 1052 QAEELFEELRSNGYKLDRSFYHLMMKMYRTSGDHQKAENLLEIMKEAGIEPNTATMHLLM 1111
Query: 216 NSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
SYG E +++L+ + G +D + YS+V Y++ G
Sbjct: 1112 VSYGKSGQPEEADRILKNLRTMG-AVLDTLPYSSVIDAYLKKG 1153
>Medtr3g105900.1 | proton gradient regulation protein | HC |
chr3:48847086-48840643 | 20130731
Length = 1246
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 11/217 (5%)
Query: 143 GALLNCYVRAGLV--------DKSLSQMQKMKEMGYVSCL-NYNNIMCLYAQSDQHEKVP 193
G +LN Y GL+ +++L ++M G + Y+ +M + K+
Sbjct: 196 GFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIM 255
Query: 194 GVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATF 253
+L MK G+ P+I++Y +CI + G +++ + +E++ EG D +TY+ +
Sbjct: 256 NLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG-CGPDVITYTVLIDA 314
Query: 254 YIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQL 313
AG + V Y L+ + + + + R W + +
Sbjct: 315 LCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374
Query: 314 NGEYITLLSWLVKLGDLDEAEKLLGEWELSDGLSPSL 350
Y L+ L K GD+D A +L + + G+ P+L
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDML-DVMTTKGIFPNL 410
>Medtr2g058580.1 | PPR containing plant-like protein | HC |
chr2:24208300-24211066 | 20130731
Length = 785
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 66/118 (55%), Gaps = 3/118 (2%)
Query: 125 AESYFQNLSD-IDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCL 182
A+ Y++ L D ++ ++ + ++NC RA +D+ +M + G++ + YN ++ +
Sbjct: 530 AQVYYKILKDRLNWDQEFYNCVINCCARALPIDELSRLFDEMLQRGFMPNTFTYNVMLNV 589
Query: 183 YAQSDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHT 240
+ ++ +KV + M K+ G+ D+ +Y I+SYG + D NM + + +++ +G +
Sbjct: 590 FGKAKLFKKVRRLYFMAKKQGLV-DVITYNTIIDSYGKKKDFRNMSRTVRKMQFDGFS 646
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 1/100 (1%)
Query: 140 KVHGALLNCYVRAGLVDKSLSQMQKMKEMGYVSCL-NYNNIMCLYAQSDQHEKVPGVLAM 198
+ + ++L+ Y + +D S ++ MKE S L YN ++ +Y + E+V VLA
Sbjct: 650 EAYNSMLDAYGKDSQMDAFRSVLKMMKESNCASDLYTYNIVINIYGEQGWIEEVSDVLAE 709
Query: 199 MKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREG 238
+ E G+ PD+ SY I +YG +E +L++E+ + G
Sbjct: 710 LNECGLRPDLCSYNTLIKAYGIAGMVEEAVELIKEMRKNG 749
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 16/188 (8%)
Query: 80 LRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGLI--GRVHGLESAESYFQNL--SDI 135
R R F A+ + +M S+G+ P S + + GL G+V E AE +F L +
Sbjct: 481 FRNRTDF-EAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKV---EEAEEFFNWLKGESV 536
Query: 136 DKTEKVHGALLNCYVRAGLVDKS------LSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQ 188
+ + +++ AL+N Y A L++KS ++ M EM S + Y+ I +
Sbjct: 537 EISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGN 596
Query: 189 HEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYS 248
E + + G +PD +Y + IN Y + L +L ++++ G T D +TY+
Sbjct: 597 MEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGIT-PDAVTYT 655
Query: 249 TVATFYIR 256
+ Y +
Sbjct: 656 IMINGYCK 663
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 105/239 (43%), Gaps = 27/239 (11%)
Query: 26 LYRSASTTVTKRRDLYSRISPLGDPSVSVVPVLEKW-VQQGNAIKEKQLQLIVKTLRTRK 84
L S + ++ LY++ S + P+V + +L K+ ++G+ + +VK +R K
Sbjct: 211 LVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFE---VVKEMRNSK 267
Query: 85 -RFTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSDIDKTEK--- 140
+ + + S M GLC R L+ A F+ + D+
Sbjct: 268 YSYPNVITYSTLMD--GLC---------------RNGRLKEAFELFEEMVSKDQIVPDPL 310
Query: 141 VHGALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMM 199
+ L+N + R G D++ + ++ MK G + NY+ ++ ++ + + GVLA M
Sbjct: 311 TYNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEM 370
Query: 200 KEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAG 258
K G+ PD +Y IN + ++ +LL E+ +E D +T++ + R G
Sbjct: 371 KSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEM-KENDCQADTVTFNVILGGLCREG 428
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 86 FTHALQVSEWMSSKGLCPISPGDRAVQLGLIGRVHGLESAESYFQNLSD--IDKTEKVHG 143
F AL + MS KGL P + G+ +V L A + D + E+ +
Sbjct: 315 FHQALVLLHEMSGKGLSPNVVTYTTLINGMC-KVKNLSRAMEILSLMRDRGLSPNERTYT 373
Query: 144 ALLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMKED 202
L++ + R GL++++ + +M + G+V S + YN ++ + + E+ GVL M E
Sbjct: 374 TLVDGFCRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVER 433
Query: 203 GVSPDIFSYRVCINSYGARSDLENMEKL-LEEIEREGHTCVDWMTYSTV 250
G+ PD+ SY I+ + +L ++ LE +E+ D +TYS++
Sbjct: 434 GLFPDVVSYSTVISLFCRNGELGKAFQMKLEMVEKR--ILPDAVTYSSL 480
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 86/202 (42%), Gaps = 3/202 (1%)
Query: 150 VRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDGVSPDI 208
V G D L M +M+ G + + + YN ++ Y + ++ ++ G+L +M V ++
Sbjct: 205 VSVGRFDSGLHFMNEMETKGCLPNVVTYNTMISGYCKENKLDEAFGLLKIMGGKRVEANL 264
Query: 209 FSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTVATFYIRAGXXXXXXXXXX 268
SY IN + + +++EE+ +G + D +TY+T+ + + G
Sbjct: 265 ISYNAVINGLCGQGRMNETMEVIEEMSLKGLS-PDCVTYNTLVNGFCKDGNFHQALVLLH 323
Query: 269 XXXDNLDKRSAVAYNHLISHYAGLEMKKAMMRLWKLQKANCKRQLNGEYITLLSWLVKLG 328
+ V Y LI+ ++ M + L + Y TL+ + G
Sbjct: 324 EMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQG 383
Query: 329 DLDEAEKLLGEWELSDGLSPSL 350
++EA K+L E + G PS+
Sbjct: 384 LMNEAYKVLSEM-VDSGFVPSV 404
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 111/268 (41%), Gaps = 11/268 (4%)
Query: 76 IVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLG--LIGRVHGLESAESYFQN-- 131
I+ ++ K A + M SKG+ P A+ G ++G+ L+ A F
Sbjct: 231 IIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGK---LKDAIDLFNKMI 287
Query: 132 LSDIDKTEKVHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHE 190
L +I L+N + + G + + + M + G + + YN++M Y +
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 191 KVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWMTYSTV 250
K + M + GV+PDI SY + IN + + L +E+ R+ + D +TYS++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK-NIIPDVVTYSSL 406
Query: 251 ATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYAGL-EMKKAMMRLWKLQKANC 309
++G D + YN ++ ++ KA+ L K +
Sbjct: 407 IDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGF 466
Query: 310 KRQLNGEYITLLSWLVKLGDLDEAEKLL 337
+ ++ Y L+ L + G L++A K+
Sbjct: 467 QPDIS-TYSILIKGLCQSGKLEDARKVF 493
>Medtr1g112240.1 | PPR containing plant-like protein | HC |
chr1:50767348-50763755 | 20130731
Length = 559
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 141 VHGALLNCYVRAGLVDKSLSQMQKMKEMGY-VSCLNYNNIMCLYAQSDQHEKVPGVLAMM 199
+ AL+N + R GL +K+ ++M+E G YN +M Y+++ + ++M
Sbjct: 279 TYTALVNAFAREGLCEKAEEIFEQMQEAGLEPDVYAYNALMEAYSRAGFPYGAAEIFSLM 338
Query: 200 KEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHT 240
+ G PD SY + +++YG ++ E + E ++R G T
Sbjct: 339 QHMGCEPDRASYNILVDAYGKAGFQDDAEAVFENMKRVGIT 379
>Medtr2g037740.1 | PPR containing plant-like protein | HC |
chr2:16348803-16345332 | 20130731
Length = 1070
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 145 LLNCYVRAGLVDKSLSQMQKMKEMGYV-SCLNYNNIMCLYAQSDQHEKVPGVLAMMKEDG 203
L++ + + G V+KS + + KM + G + + + Y IM Y + + E+ G+ MK+ G
Sbjct: 274 LIDGFSKLGDVEKSFTFLAKMIKEGIIPNKVTYTAIMSAYCKKGRIEEAFGLFVRMKDMG 333
Query: 204 VSPDIFSYRVCINSYGARSDLENMEKLLEEIEREG 238
+ D F + V I+ +G D + + +LL E+E+ G
Sbjct: 334 IELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRG 368
>Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:24220458-24218920 | 20130731
Length = 512
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 113/273 (41%), Gaps = 21/273 (7%)
Query: 76 IVKTLRTRKRFTHALQVSEWMSSKGLCPISPGDRAVQLGL---------IGRVHGLESAE 126
I+ + K A M +K +CP + GL IG +H +
Sbjct: 215 IIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI--- 271
Query: 127 SYFQNLSDIDKTEKVHGALLNCYVRAGLVDKSLSQ-MQKMKEMGYVSCLNYNNIMCLYAQ 185
L +I+ T L++ + + G V ++ + + MK+ + + YN++M Y
Sbjct: 272 -----LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCL 326
Query: 186 SDQHEKVPGVLAMMKEDGVSPDIFSYRVCINSYGARSDLENMEKLLEEIEREGHTCVDWM 245
++ K + M + GV+PD+ SY + I+ + ++ KL EE+ + D +
Sbjct: 327 VNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCK-QIFPDVV 385
Query: 246 TYSTVATFYIRAGXXXXXXXXXXXXXDNLDKRSAVAYNHLISHYA-GLEMKKAMMRLWKL 304
TY+++ ++G D + + YN L+ + KA+ L KL
Sbjct: 386 TYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKL 445
Query: 305 QKANCKRQLNGEYITLLSWLVKLGDLDEAEKLL 337
+ N + + Y L++ L K G L +A+K+
Sbjct: 446 KDHNIQPSV-CTYNILINGLCKSGRLKDAQKVF 477