Miyakogusa Predicted Gene

Lj0g3v0094799.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0094799.1 Non Characterized Hit- tr|J9AS06|J9AS06_BACCE
Uncharacterized protein OS=Bacillus cereus BAG6X1-1
PE,39.16,1e-18,UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMATE--2,
6-DIAMINOPIMELATE LIGASE,NULL; MUR LIGASE FAMILY MEMBER,NU,CUFF.5388.1
         (404 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g098345.1 | UDP-N-acetylmuramyl-tripeptide synthetase | HC...   527   e-150

>Medtr8g098345.1 | UDP-N-acetylmuramyl-tripeptide synthetase | HC |
           chr8:41028678-41032798 | 20130731
          Length = 776

 Score =  527 bits (1358), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 295/417 (70%), Positives = 326/417 (78%), Gaps = 20/417 (4%)

Query: 1   MALPFLTLPSFFHTS----NSITATFAP-------PSTRFRSHSYRLRPPGATGADGIFY 49
           MAL F+TLP F   +    NS T    P       PS         LRPP A   DG FY
Sbjct: 1   MALTFVTLPHFISPTTIKPNSTTTILKPKHFLLQFPSRPLSYPFLPLRPPSAIAPDGKFY 60

Query: 50  PNXXXXXXXXXXXXXXHGFSKFQQIHIQADRARQIQEEDFKKNQSTFLAAIADVEDAPDI 109
           PN              HGF+K+QQI +QADRAR  +EEDFK NQ+T+L+AIAD  DAPD 
Sbjct: 61  PNPADDDPPEVGEDSAHGFTKYQQIQLQADRARLREEEDFKNNQATYLSAIADSHDAPDE 120

Query: 110 PSTLDSGADDLFGEIDKAIALKRKEFVKQGLLQPNPAKPLIPDVADELQPDELADVEEID 169
           PS++DS  DDLFGEIDKAIALKRKEFVKQGLL+PNPAK  + +  +ELQP EL DVEEI+
Sbjct: 121 PSSIDSAEDDLFGEIDKAIALKRKEFVKQGLLKPNPAKSEV-EAVEELQPHELDDVEEIE 179

Query: 170 QLRDLAAAATSDEPPGDFVGEGDDSSLKADSPFELDFESYGKS-KARIVEPKFRMSLAEL 228
           +LR+L     SDE PGDF  +G D SLK++S F+LDF+S G+S KARIVEPKF+MSLAEL
Sbjct: 180 RLREL--KVNSDESPGDFEEDG-DLSLKSESSFDLDFDSLGQSNKARIVEPKFKMSLAEL 236

Query: 229 LDESKVVPVSVYGNLEVEITGIQHDSRLVTSGNLFVCCV--KNDGHVLLSEADKRGAVAV 286
           LDESKVVPVSVYGNLEVEI GIQHDSRLVTSGNLFVCCV  KNDGH+ LSEADKRGA+AV
Sbjct: 237 LDESKVVPVSVYGNLEVEINGIQHDSRLVTSGNLFVCCVGRKNDGHMFLSEADKRGAIAV 296

Query: 287 VASKEIDIEDTLGCKALVIVEDTNAVLAALAASFYRYPSKNMAVIGIAGTYGKTTTTYLI 346
           VASKEIDIEDTLGCKALVIVEDTNAVLA LAASFY+YPSKNMA+IGI GTYGKTTTTYLI
Sbjct: 297 VASKEIDIEDTLGCKALVIVEDTNAVLATLAASFYKYPSKNMALIGITGTYGKTTTTYLI 356

Query: 347 KSMYEAMGLRTGMFNSIACYVHGDNQLDLEAVDETLDAVLVQNLMAKMLHNGTEAVV 403
           KSMYEAMGLRTGMFNSIA YVHGDNQLD  +    LDAVLVQNLMAKMLHNGTE+VV
Sbjct: 357 KSMYEAMGLRTGMFNSIASYVHGDNQLD--SSYGVLDAVLVQNLMAKMLHNGTESVV 411