Miyakogusa Predicted Gene

Lj0g3v0093459.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0093459.1 Non Characterized Hit- tr|I1HCS0|I1HCS0_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,36.9,4e-17,
,CUFF.5142.1
         (172 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g034680.1 | transmembrane protein, putative | HC | chr6:14...   249   6e-67
Medtr1g097400.2 | transmembrane protein, putative | HC | chr1:43...   182   1e-46
Medtr1g097400.1 | transmembrane protein, putative | HC | chr1:43...   182   1e-46

>Medtr6g034680.1 | transmembrane protein, putative | HC |
           chr6:14244721-14239419 | 20130731
          Length = 194

 Score =  249 bits (637), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 122/191 (63%), Positives = 144/191 (75%), Gaps = 20/191 (10%)

Query: 2   EEEKAPLIGEIEE------TSQVSNTTESERHVRTKVPEVEIHLFRQGKGPVAVFX---- 51
           E E +PL+    E      T+  +N  ++ +HVRTKVPEVEIHLFRQGKGP+ VF     
Sbjct: 4   ENENSPLLTSEIEEEVEEITTATANDGDTAKHVRTKVPEVEIHLFRQGKGPIVVFKSALG 63

Query: 52  ----------DILDKHGFKSLYAFNPQFRSRGVPVRFNPRNGRSLLTYRDGVVVYLDGEP 101
                     DIL+KHG K+++AFN Q R RGVPVRFNPRNGRS+LTYRDG VVYLDGEP
Sbjct: 64  GWEQDQLEVGDILEKHGLKTVFAFNHQTRVRGVPVRFNPRNGRSILTYRDGAVVYLDGEP 123

Query: 102 KDSLVQPVTRILIGVAVVTLMITILSRDTPEWMKKLNVSSVNFPPWILACVVIVFTRMRK 161
           KDSL++P+TRILIGVA++TLMI I+SR+TPEWM K N S  NF PW+LACVVIVFTRMRK
Sbjct: 124 KDSLIKPITRILIGVAIITLMIVIVSRETPEWMNKFNFSPGNFSPWVLACVVIVFTRMRK 183

Query: 162 RTKDFLKRRGW 172
           RTKDF  +RGW
Sbjct: 184 RTKDFFTKRGW 194


>Medtr1g097400.2 | transmembrane protein, putative | HC |
           chr1:43943109-43940099 | 20130731
          Length = 179

 Score =  182 bits (462), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 29/189 (15%)

Query: 1   MEEEKAPLIGEIEETSQVSNTTESERHVRTKVPEVEIHLFRQGKGPVAVFX--------- 51
           MEE+K  L+GE           ESER       +VEIHLFRQG+GP+AVF          
Sbjct: 1   MEEKKEALLGE----------RESERKQSESAKKVEIHLFRQGEGPIAVFESELGGCEQN 50

Query: 52  -----DILDKHGFKSLYAFNPQFRSRGVPVRFNPRNGRSLLTYRDGVVVYLDGEPKDSLV 106
                +IL K+  KS++AFNP+   R VP+RFNP+ G S+L+YR+  V+Y+DGEPK+SL+
Sbjct: 51  RLEVREILHKYSLKSIFAFNPR-SGRAVPIRFNPKTGYSVLSYRNAAVLYIDGEPKESLL 109

Query: 107 QPVTRILIGVAVVTLMITILSRD----TPEWMKKLNVSSVNFPPWILACVVIVFTRMRKR 162
           +PV RIL+GVA++ +M+ ++  D    T EW++KLNVS V++PP I+ACVV+VF+RMR R
Sbjct: 110 KPVYRILVGVALIAIMLMLVYGDIGISTAEWVQKLNVSGVDYPPLIVACVVVVFSRMRHR 169

Query: 163 TKDFLKRRG 171
           T+ FLKR G
Sbjct: 170 TRRFLKRLG 178


>Medtr1g097400.1 | transmembrane protein, putative | HC |
           chr1:43943109-43940099 | 20130731
          Length = 179

 Score =  182 bits (462), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 29/189 (15%)

Query: 1   MEEEKAPLIGEIEETSQVSNTTESERHVRTKVPEVEIHLFRQGKGPVAVFX--------- 51
           MEE+K  L+GE           ESER       +VEIHLFRQG+GP+AVF          
Sbjct: 1   MEEKKEALLGE----------RESERKQSESAKKVEIHLFRQGEGPIAVFESELGGCEQN 50

Query: 52  -----DILDKHGFKSLYAFNPQFRSRGVPVRFNPRNGRSLLTYRDGVVVYLDGEPKDSLV 106
                +IL K+  KS++AFNP+   R VP+RFNP+ G S+L+YR+  V+Y+DGEPK+SL+
Sbjct: 51  RLEVREILHKYSLKSIFAFNPR-SGRAVPIRFNPKTGYSVLSYRNAAVLYIDGEPKESLL 109

Query: 107 QPVTRILIGVAVVTLMITILSRD----TPEWMKKLNVSSVNFPPWILACVVIVFTRMRKR 162
           +PV RIL+GVA++ +M+ ++  D    T EW++KLNVS V++PP I+ACVV+VF+RMR R
Sbjct: 110 KPVYRILVGVALIAIMLMLVYGDIGISTAEWVQKLNVSGVDYPPLIVACVVVVFSRMRHR 169

Query: 163 TKDFLKRRG 171
           T+ FLKR G
Sbjct: 170 TRRFLKRLG 178