Miyakogusa Predicted Gene
- Lj0g3v0093459.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0093459.1 Non Characterized Hit- tr|I1HCS0|I1HCS0_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,36.9,4e-17,
,CUFF.5142.1
(172 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g034680.1 | transmembrane protein, putative | HC | chr6:14... 249 6e-67
Medtr1g097400.2 | transmembrane protein, putative | HC | chr1:43... 182 1e-46
Medtr1g097400.1 | transmembrane protein, putative | HC | chr1:43... 182 1e-46
>Medtr6g034680.1 | transmembrane protein, putative | HC |
chr6:14244721-14239419 | 20130731
Length = 194
Score = 249 bits (637), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 122/191 (63%), Positives = 144/191 (75%), Gaps = 20/191 (10%)
Query: 2 EEEKAPLIGEIEE------TSQVSNTTESERHVRTKVPEVEIHLFRQGKGPVAVFX---- 51
E E +PL+ E T+ +N ++ +HVRTKVPEVEIHLFRQGKGP+ VF
Sbjct: 4 ENENSPLLTSEIEEEVEEITTATANDGDTAKHVRTKVPEVEIHLFRQGKGPIVVFKSALG 63
Query: 52 ----------DILDKHGFKSLYAFNPQFRSRGVPVRFNPRNGRSLLTYRDGVVVYLDGEP 101
DIL+KHG K+++AFN Q R RGVPVRFNPRNGRS+LTYRDG VVYLDGEP
Sbjct: 64 GWEQDQLEVGDILEKHGLKTVFAFNHQTRVRGVPVRFNPRNGRSILTYRDGAVVYLDGEP 123
Query: 102 KDSLVQPVTRILIGVAVVTLMITILSRDTPEWMKKLNVSSVNFPPWILACVVIVFTRMRK 161
KDSL++P+TRILIGVA++TLMI I+SR+TPEWM K N S NF PW+LACVVIVFTRMRK
Sbjct: 124 KDSLIKPITRILIGVAIITLMIVIVSRETPEWMNKFNFSPGNFSPWVLACVVIVFTRMRK 183
Query: 162 RTKDFLKRRGW 172
RTKDF +RGW
Sbjct: 184 RTKDFFTKRGW 194
>Medtr1g097400.2 | transmembrane protein, putative | HC |
chr1:43943109-43940099 | 20130731
Length = 179
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 29/189 (15%)
Query: 1 MEEEKAPLIGEIEETSQVSNTTESERHVRTKVPEVEIHLFRQGKGPVAVFX--------- 51
MEE+K L+GE ESER +VEIHLFRQG+GP+AVF
Sbjct: 1 MEEKKEALLGE----------RESERKQSESAKKVEIHLFRQGEGPIAVFESELGGCEQN 50
Query: 52 -----DILDKHGFKSLYAFNPQFRSRGVPVRFNPRNGRSLLTYRDGVVVYLDGEPKDSLV 106
+IL K+ KS++AFNP+ R VP+RFNP+ G S+L+YR+ V+Y+DGEPK+SL+
Sbjct: 51 RLEVREILHKYSLKSIFAFNPR-SGRAVPIRFNPKTGYSVLSYRNAAVLYIDGEPKESLL 109
Query: 107 QPVTRILIGVAVVTLMITILSRD----TPEWMKKLNVSSVNFPPWILACVVIVFTRMRKR 162
+PV RIL+GVA++ +M+ ++ D T EW++KLNVS V++PP I+ACVV+VF+RMR R
Sbjct: 110 KPVYRILVGVALIAIMLMLVYGDIGISTAEWVQKLNVSGVDYPPLIVACVVVVFSRMRHR 169
Query: 163 TKDFLKRRG 171
T+ FLKR G
Sbjct: 170 TRRFLKRLG 178
>Medtr1g097400.1 | transmembrane protein, putative | HC |
chr1:43943109-43940099 | 20130731
Length = 179
Score = 182 bits (462), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 29/189 (15%)
Query: 1 MEEEKAPLIGEIEETSQVSNTTESERHVRTKVPEVEIHLFRQGKGPVAVFX--------- 51
MEE+K L+GE ESER +VEIHLFRQG+GP+AVF
Sbjct: 1 MEEKKEALLGE----------RESERKQSESAKKVEIHLFRQGEGPIAVFESELGGCEQN 50
Query: 52 -----DILDKHGFKSLYAFNPQFRSRGVPVRFNPRNGRSLLTYRDGVVVYLDGEPKDSLV 106
+IL K+ KS++AFNP+ R VP+RFNP+ G S+L+YR+ V+Y+DGEPK+SL+
Sbjct: 51 RLEVREILHKYSLKSIFAFNPR-SGRAVPIRFNPKTGYSVLSYRNAAVLYIDGEPKESLL 109
Query: 107 QPVTRILIGVAVVTLMITILSRD----TPEWMKKLNVSSVNFPPWILACVVIVFTRMRKR 162
+PV RIL+GVA++ +M+ ++ D T EW++KLNVS V++PP I+ACVV+VF+RMR R
Sbjct: 110 KPVYRILVGVALIAIMLMLVYGDIGISTAEWVQKLNVSGVDYPPLIVACVVVVFSRMRHR 169
Query: 163 TKDFLKRRG 171
T+ FLKR G
Sbjct: 170 TRRFLKRLG 178