Miyakogusa Predicted Gene

Lj0g3v0092949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0092949.1 Non Characterized Hit- tr|F6H2E5|F6H2E5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.04,0.000000009,seg,NULL,CUFF.5098.1
         (556 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g464490.1 | hypothetical protein | HC | chr8:22804280-2280...   245   7e-65

>Medtr8g464490.1 | hypothetical protein | HC |
           chr8:22804280-22807792 | 20130731
          Length = 462

 Score =  245 bits (626), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 160/339 (47%), Positives = 192/339 (56%), Gaps = 33/339 (9%)

Query: 1   MEASKKIEIVIKKANHHWAFLEHIEAPMWADLTLEANSLGEDKSDGDWFNTSHPFHQWSA 60
           MEASKK  I I     HWAFLEH EAPMWADL  EANS  E+ +D DWFN SHPFHQ SA
Sbjct: 1   MEASKKNVIFID----HWAFLEHFEAPMWADLIFEANSGYENITDDDWFNESHPFHQLSA 56

Query: 61  RELKSKFSHPGEEIVTSSVDLQGLTSPKLPSSVSRSRGKDYNSKKW-EGTNLSILLDKQQ 119
           RELKSKF+H GEE V         TSP LPSSVS+SRGK Y +K W +G NL++LLDKQQ
Sbjct: 57  RELKSKFAHSGEEAV---------TSPALPSSVSKSRGKHYINKNWGKGVNLNVLLDKQQ 107

Query: 120 GLS-GRCLQQGSRFAQEVKPKSKSIAGRPNGLLSTKLGLPYTGS--GKTKSIASC----- 171
           GLS GRCL+QGS F  EVK KS S   R NGL+S K GL +  +  GK  S ASC     
Sbjct: 108 GLSKGRCLKQGSSFGHEVKVKSTSNVSRTNGLMSEKSGLTFEHNTRGKATSKASCNLVGS 167

Query: 172 SSNLDDKSGQSSTRSTITSENTLQK-----HKEVTRQPCDK-KSGSLSVMSSLGNRCVTK 225
           SS++D K+ + STRS +TSEN + K     HK+V+   CD+    S     S G   VT 
Sbjct: 168 SSSMDKKNYERSTRSMVTSENMMPKKDYKGHKKVS---CDEKSKSSSVRSVSFGRSAVTV 224

Query: 226 KASTFQRQQ--CMGVSSQPFDQXXXXXXXXXXXXXXYVTASRVEVGVDSMLXXXXXXXXX 283
           +AS   + Q   M VSS+P DQ                   + E+ V ++          
Sbjct: 225 EASRVVQDQHKYMEVSSKPCDQKSGSSSVNSINLGKTHVTPKAEMDVGNIKSRGRTLSSG 284

Query: 284 XXXXXXXXNPGYGAKIVPKQRSEKIRDGKDVNAMDHADK 322
                   NP Y  K V KQ+ +KI D K V +M+ ADK
Sbjct: 285 KSSVGSCSNPSYEVKFVSKQQRQKITDKKVVGSMNLADK 323



 Score =  167 bits (422), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/218 (48%), Positives = 129/218 (59%), Gaps = 17/218 (7%)

Query: 341 KSYVTEKASKVEMGVDSMQXXXXXXXXXXXXXXXXXXXXFEAMFASKQQGEEITDEKDL- 399
           K++VT KA   EM V +++                    +E  F SKQQ ++ITD+K + 
Sbjct: 260 KTHVTPKA---EMDVGNIKSRGRTLSSGKSSVGSCSNPSYEVKFVSKQQRQKITDKKVVG 316

Query: 400 -MNPAVKNRCNPGNKSKASVVLIERANFGNRKGGNIDYAKPAYHRTAKSLVQSQFTSSRA 458
            MN A KNRCN GNKSK S + +E    G+ KG NI          AKSLV+S+  SS  
Sbjct: 317 SMNLADKNRCNVGNKSKTSSIKVEGKETGSTKGSNIS--------VAKSLVKSRSVSSST 368

Query: 459 KLPCKVNKENSCTGTKERLGTSKVKGKENAIRNVTMNQKCNERGVRAGGTLKTQRTTGHV 518
            LP KVNK+NS  G KE       KGKENA R +T+N+ CNE+GV A G LK+Q+   H 
Sbjct: 369 MLPGKVNKKNSTVGKKEAFD----KGKENATRKLTVNKNCNEKGVLARGILKSQKAREHN 424

Query: 519 HRQNDDIAGSAALTILGKVTDQREAKNPTNRDRRIYLR 556
            +  DD AGSAALTILGKV DQREAKNP N  RRIYLR
Sbjct: 425 CQHKDDKAGSAALTILGKVNDQREAKNPGNPARRIYLR 462