Miyakogusa Predicted Gene

Lj0g3v0092619.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0092619.1 Non Characterized Hit- tr|G7KC10|G7KC10_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,68.85,0.00000000001,seg,NULL,CUFF.5072.1
         (69 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g010060.1 | hypothetical protein | HC | chr5:2614910-26152...    55   2e-08

>Medtr5g010060.1 | hypothetical protein | HC |
          chr5:2614910-2615266 | 20130731
          Length = 63

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 40/69 (57%), Gaps = 6/69 (8%)

Query: 1  MNNRIFGHVQPADVVVNRKNHRRFKDKKPLPKRGQIKSKIAANAFHXXXXXXXXXXXXXD 60
          MN R+ G V  A+VV NR    RF+ KK LPKRGQIKSKIAA+AFH              
Sbjct: 1  MNTRM-GRVASAEVVNNRN---RFRGKKSLPKRGQIKSKIAASAFHSIVSVISRASTSSG 56

Query: 61 LQLHSPRQN 69
          L   SPR+N
Sbjct: 57 LL--SPRKN 63