Miyakogusa Predicted Gene

Lj0g3v0092479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0092479.1 Non Characterized Hit- tr|K4C866|K4C866_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,39.31,1e-18,no
description,Tify; seg,NULL; TIFY,Tify; tify,Tify; CCT_2,CO/COL/TOC1,
conserved site,CUFF.5071.1
         (350 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g069870.1 | jasmonate zim-domain protein | HC | chr6:25209...   315   5e-86
Medtr6g069870.4 | jasmonate zim-domain protein | HC | chr6:25209...   315   5e-86
Medtr6g069870.3 | jasmonate zim-domain protein | HC | chr6:25209...   306   3e-83
Medtr6g069870.2 | jasmonate zim-domain protein | HC | chr6:25209...   278   5e-75
Medtr1g031930.1 | jasmonate zim-domain protein | HC | chr1:11247...   144   1e-34
Medtr1g031930.2 | jasmonate zim-domain protein | HC | chr1:11247...   103   2e-22
Medtr2g029260.1 | zim motif protein | HC | chr2:10915506-1091444...    53   4e-07

>Medtr6g069870.1 | jasmonate zim-domain protein | HC |
           chr6:25209215-25205882 | 20130731
          Length = 395

 Score =  315 bits (806), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 200/377 (53%), Positives = 223/377 (59%), Gaps = 89/377 (23%)

Query: 35  MQWSFSNKVPALPHQFLSFKT-TQEERSRNSSISDPLASSGYMTISTKDAFDSNQKPFL- 92
           MQWSFSNKV  LP QF+SFK  T E+RSRN+ + DP+ASSGYMTISTKDAFDSNQK FL 
Sbjct: 1   MQWSFSNKVSNLP-QFMSFKNNTHEDRSRNN-VMDPVASSGYMTISTKDAFDSNQKSFLG 58

Query: 93  --QKNLSIGKQAGNNHGMTVYPLQCSDVQSACLQEPRKFPVSNQSKQVSPVLQSNLATTG 150
             Q+NL+I KQ GN HG+T+YP+Q SD QS C QE R   VSNQS  V          TG
Sbjct: 59  VTQENLAI-KQVGNKHGITIYPIQSSDAQSVCNQEARTISVSNQSNHV---------ITG 108

Query: 151 FNMVNSVIKPQPLGSKSSATPVSVLPPIGSIVGSTDLR--NCSKSSGT-PAQLTIFYGGS 207
            NMVNSV   Q  GSKSSATP+SVLP  G IVGSTDLR  NCSKS+GT PAQLTIFYGG+
Sbjct: 109 INMVNSVTNSQTFGSKSSATPLSVLPSKGPIVGSTDLRSRNCSKSNGTTPAQLTIFYGGT 168

Query: 208 VCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSKNGXXXXXXXXXXXXX 267
           VCV+DDISPEKAKA+ML+AGNG+           K+Q EIS PSK               
Sbjct: 169 VCVYDDISPEKAKAIMLLAGNGT-----------KMQQEISIPSKKD--NFIISQPYPSP 215

Query: 268 XXXXXXVTSHASSQPGRGSSGNNE----------------------------LPM----- 294
                 +TSHAS+QP  GSS NNE                            LPM     
Sbjct: 216 LPSPIPMTSHASTQPRGGSSSNNEVTIIRTLGHSIAKSSHNDLSHLSSLPSPLPMTSHAS 275

Query: 295 ---------------IRPAGPSTAPNNHSRS---------AATKMIQPGGLPQARKASLA 330
                          IR  GPS AP NH  S           T +IQP GLPQARKASL 
Sbjct: 276 SYPKGGSSSNNEVTIIRSLGPSNAPTNHLESPIVATSVGLTPTNVIQPVGLPQARKASLT 335

Query: 331 RFLEKRKERVISTLPYF 347
           RFLEKRKER +ST PY+
Sbjct: 336 RFLEKRKERAMSTSPYY 352


>Medtr6g069870.4 | jasmonate zim-domain protein | HC |
           chr6:25209508-25205862 | 20130731
          Length = 395

 Score =  315 bits (806), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 200/377 (53%), Positives = 223/377 (59%), Gaps = 89/377 (23%)

Query: 35  MQWSFSNKVPALPHQFLSFKT-TQEERSRNSSISDPLASSGYMTISTKDAFDSNQKPFL- 92
           MQWSFSNKV  LP QF+SFK  T E+RSRN+ + DP+ASSGYMTISTKDAFDSNQK FL 
Sbjct: 1   MQWSFSNKVSNLP-QFMSFKNNTHEDRSRNN-VMDPVASSGYMTISTKDAFDSNQKSFLG 58

Query: 93  --QKNLSIGKQAGNNHGMTVYPLQCSDVQSACLQEPRKFPVSNQSKQVSPVLQSNLATTG 150
             Q+NL+I KQ GN HG+T+YP+Q SD QS C QE R   VSNQS  V          TG
Sbjct: 59  VTQENLAI-KQVGNKHGITIYPIQSSDAQSVCNQEARTISVSNQSNHV---------ITG 108

Query: 151 FNMVNSVIKPQPLGSKSSATPVSVLPPIGSIVGSTDLR--NCSKSSGT-PAQLTIFYGGS 207
            NMVNSV   Q  GSKSSATP+SVLP  G IVGSTDLR  NCSKS+GT PAQLTIFYGG+
Sbjct: 109 INMVNSVTNSQTFGSKSSATPLSVLPSKGPIVGSTDLRSRNCSKSNGTTPAQLTIFYGGT 168

Query: 208 VCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSKNGXXXXXXXXXXXXX 267
           VCV+DDISPEKAKA+ML+AGNG+           K+Q EIS PSK               
Sbjct: 169 VCVYDDISPEKAKAIMLLAGNGT-----------KMQQEISIPSKKD--NFIISQPYPSP 215

Query: 268 XXXXXXVTSHASSQPGRGSSGNNE----------------------------LPM----- 294
                 +TSHAS+QP  GSS NNE                            LPM     
Sbjct: 216 LPSPIPMTSHASTQPRGGSSSNNEVTIIRTLGHSIAKSSHNDLSHLSSLPSPLPMTSHAS 275

Query: 295 ---------------IRPAGPSTAPNNHSRS---------AATKMIQPGGLPQARKASLA 330
                          IR  GPS AP NH  S           T +IQP GLPQARKASL 
Sbjct: 276 SYPKGGSSSNNEVTIIRSLGPSNAPTNHLESPIVATSVGLTPTNVIQPVGLPQARKASLT 335

Query: 331 RFLEKRKERVISTLPYF 347
           RFLEKRKER +ST PY+
Sbjct: 336 RFLEKRKERAMSTSPYY 352


>Medtr6g069870.3 | jasmonate zim-domain protein | HC |
           chr6:25209284-25205882 | 20130731
          Length = 344

 Score =  306 bits (783), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 196/369 (53%), Positives = 217/369 (58%), Gaps = 89/369 (24%)

Query: 35  MQWSFSNKVPALPHQFLSFKT-TQEERSRNSSISDPLASSGYMTISTKDAFDSNQKPFL- 92
           MQWSFSNKV  LP QF+SFK  T E+RSRN+ + DP+ASSGYMTISTKDAFDSNQK FL 
Sbjct: 1   MQWSFSNKVSNLP-QFMSFKNNTHEDRSRNN-VMDPVASSGYMTISTKDAFDSNQKSFLG 58

Query: 93  --QKNLSIGKQAGNNHGMTVYPLQCSDVQSACLQEPRKFPVSNQSKQVSPVLQSNLATTG 150
             Q+NL+I KQ GN HG+T+YP+Q SD QS C QE R   VSNQS  V          TG
Sbjct: 59  VTQENLAI-KQVGNKHGITIYPIQSSDAQSVCNQEARTISVSNQSNHV---------ITG 108

Query: 151 FNMVNSVIKPQPLGSKSSATPVSVLPPIGSIVGSTDLR--NCSKSSGT-PAQLTIFYGGS 207
            NMVNSV   Q  GSKSSATP+SVLP  G IVGSTDLR  NCSKS+GT PAQLTIFYGG+
Sbjct: 109 INMVNSVTNSQTFGSKSSATPLSVLPSKGPIVGSTDLRSRNCSKSNGTTPAQLTIFYGGT 168

Query: 208 VCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSKNGXXXXXXXXXXXXX 267
           VCV+DDISPEKAKA+ML+AGNG+           K+Q EIS PSK               
Sbjct: 169 VCVYDDISPEKAKAIMLLAGNGT-----------KMQQEISIPSK--KDNFIISQPYPSP 215

Query: 268 XXXXXXVTSHASSQPGRGSSGNNE----------------------------LPM----- 294
                 +TSHAS+QP  GSS NNE                            LPM     
Sbjct: 216 LPSPIPMTSHASTQPRGGSSSNNEVTIIRTLGHSIAKSSHNDLSHLSSLPSPLPMTSHAS 275

Query: 295 ---------------IRPAGPSTAPNNHSRS---------AATKMIQPGGLPQARKASLA 330
                          IR  GPS AP NH  S           T +IQP GLPQARKASL 
Sbjct: 276 SYPKGGSSSNNEVTIIRSLGPSNAPTNHLESPIVATSVGLTPTNVIQPVGLPQARKASLT 335

Query: 331 RFLEKRKER 339
           RFLEKRKER
Sbjct: 336 RFLEKRKER 344


>Medtr6g069870.2 | jasmonate zim-domain protein | HC |
           chr6:25209601-25205833 | 20130731
          Length = 334

 Score =  278 bits (712), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 171/301 (56%), Positives = 198/301 (65%), Gaps = 33/301 (10%)

Query: 35  MQWSFSNKVPALPHQFLSFKT-TQEERSRNSSISDPLASSGYMTISTKDAFDSNQKPFL- 92
           MQWSFSNKV  LP QF+SFK  T E+RSRN+ + DP+ASSGYMTISTKDAFDSNQK FL 
Sbjct: 1   MQWSFSNKVSNLP-QFMSFKNNTHEDRSRNN-VMDPVASSGYMTISTKDAFDSNQKSFLG 58

Query: 93  --QKNLSIGKQAGNNHGMTVYPLQCSDVQSACLQEPRKFPVSNQSKQVSPVLQSNLATTG 150
             Q+NL+I KQ GN HG+T+YP+Q SD QS C QE R   VSNQS  V          TG
Sbjct: 59  VTQENLAI-KQVGNKHGITIYPIQSSDAQSVCNQEARTISVSNQSNHV---------ITG 108

Query: 151 FNMVNSVIKPQPLGSKSSATPVSVLPPIGSIVGSTDLR--NCSKSSGT-PAQLTIFYGGS 207
            NMVNSV   Q  GSKSSATP+SVLP  G IVGSTDLR  NCSKS+GT PAQLTIFYGG+
Sbjct: 109 INMVNSVTNSQTFGSKSSATPLSVLPSKGPIVGSTDLRSRNCSKSNGTTPAQLTIFYGGT 168

Query: 208 VCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSKNGXXXXXXXXXXXXX 267
           VCV+DDISPEKAKA+ML+AGNG+           K+Q EIS PSK               
Sbjct: 169 VCVYDDISPEKAKAIMLLAGNGT-----------KMQQEISIPSK--KDNFIISQPYPSP 215

Query: 268 XXXXXXVTSHASSQPGRGSSGNNELPMIRPAGPSTAPNNHSRSAATKMIQPGGLPQARKA 327
                 +TSHAS+QP  GSS NNE+ +IR  G S A ++H+  +    + P  LP    A
Sbjct: 216 LPSPIPMTSHASTQPRGGSSSNNEVTIIRTLGHSIAKSSHNDLSHLSSL-PSPLPMTSHA 274

Query: 328 S 328
           S
Sbjct: 275 S 275



 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/57 (50%), Positives = 33/57 (57%), Gaps = 9/57 (15%)

Query: 274 VTSHASSQPGRGSSGNNELPMIRPAGPSTAPNNHSRS---------AATKMIQPGGL 321
           +TSHASS P  GSS NNE+ +IR  GPS AP NH  S           T +IQPG L
Sbjct: 270 MTSHASSYPKGGSSSNNEVTIIRSLGPSNAPTNHLESPIVATSVGLTPTNVIQPGIL 326


>Medtr1g031930.1 | jasmonate zim-domain protein | HC |
           chr1:11247549-11243460 | 20130731
          Length = 361

 Score =  144 bits (363), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/356 (32%), Positives = 178/356 (50%), Gaps = 39/356 (10%)

Query: 1   MERDFLGFSSKNGPRSIMKVDEANRTRDPMMGSGMQWSFSNKVPALPHQFLS-FKTTQEE 59
           MERDFL   SK     I   +E ++       S ++W F NKV    H +L+ FK ++++
Sbjct: 1   MERDFLSLCSKESSPEIN--NEGSKNSGFSNVSAVKWPFLNKVAV--HSYLTPFKVSEDD 56

Query: 60  RSRNSSISDPLASSGYMTISTKDAFDSNQKPFLQKNLSIGKQAGNNHGMTVYPLQCSDVQ 119
           +++       + SSG                F+Q +     Q G +  +  YP+Q +   
Sbjct: 57  KAK-------MISSG----------------FIQNSFKHDGQVGIHFSVNQYPVQHNVNF 93

Query: 120 SACLQEPRKFPVSNQSKQVS---PVLQSNLATTGFNMVNSVIKPQPLGSKSSATPVSVLP 176
                + + FP+SNQ+  +S   P+L+++LAT G N+  +  K   LG      P SVLP
Sbjct: 94  MNRHHDVKMFPISNQANSLSAVHPLLKNHLATFGQNINGANAKQSLLGGLPVTAPHSVLP 153

Query: 177 PIGSIVGSTDLRNCSKSSGTPAQLTIFYGGSVCVFDDISPEKAKAVMLMAGNGSAANQTL 236
            +G++ G  +   C K S    QLT+FYGG+V +F+DI+PEKA+A+ML+AG+G +A    
Sbjct: 154 IVGTVAGLVE--PCEKPSAPAPQLTMFYGGTVNIFNDITPEKAQAIMLLAGSGLSAASNR 211

Query: 237 AVSKAKLQTEISAPSKNGX-XXXXXXXXXXXXXXXXXXVTSHASSQPGRGSSGNNELPMI 295
           A  + +  +   A   +G                    V+SH   QPG GSS ++E    
Sbjct: 212 AQPEVQASSSKFASGDDGLPISPPVYIPPCSGISSPLSVSSHTGPQPGSGSSSSDEFMAA 271

Query: 296 RPAGPSTAPNNHSRSAATKMIQ-----PGGLPQARKASLARFLEKRKERVISTLPY 346
           + +   T   +  +    K++      P  +PQARKASLARFLEKRKERV+ST PY
Sbjct: 272 KTSRGPTPTTSACKVVTPKVVNATTMIPSAIPQARKASLARFLEKRKERVMSTAPY 327


>Medtr1g031930.2 | jasmonate zim-domain protein | HC |
           chr1:11247525-11243460 | 20130731
          Length = 300

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 116/218 (53%), Gaps = 10/218 (4%)

Query: 137 QVSPVLQSNLATTGF--NMVNSVIKPQPLGSKSSATPVSVLPPIGSIVGSTDLRNCSKSS 194
           +VS   ++ + ++GF  N+  +  K   LG      P SVLP +G++ G  +   C K S
Sbjct: 51  KVSEDDKAKMISSGFIQNINGANAKQSLLGGLPVTAPHSVLPIVGTVAGLVE--PCEKPS 108

Query: 195 GTPAQLTIFYGGSVCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSKNG 254
               QLT+FYGG+V +F+DI+PEKA+A+ML+AG+G +A    A  + +  +   A   +G
Sbjct: 109 APAPQLTMFYGGTVNIFNDITPEKAQAIMLLAGSGLSAASNRAQPEVQASSSKFASGDDG 168

Query: 255 X-XXXXXXXXXXXXXXXXXXVTSHASSQPGRGSSGNNELPMIRPAGPSTAPNNHSRSAAT 313
                               V+SH   QPG GSS ++E    + +   T   +  +    
Sbjct: 169 LPISPPVYIPPCSGISSPLSVSSHTGPQPGSGSSSSDEFMAAKTSRGPTPTTSACKVVTP 228

Query: 314 KMIQ-----PGGLPQARKASLARFLEKRKERVISTLPY 346
           K++      P  +PQARKASLARFLEKRKERV+ST PY
Sbjct: 229 KVVNATTMIPSAIPQARKASLARFLEKRKERVMSTAPY 266


>Medtr2g029260.1 | zim motif protein | HC | chr2:10915506-10914443 |
           20130731
          Length = 118

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 6/107 (5%)

Query: 198 AQLTIFYGGSVCVFDDISPEKAKAVMLMAGNGSAANQTLAVSKAKLQTEISAPSKNGXXX 257
           +QLTIFY G+V VFDDI  +KA+A++L A NG      ++V+      ++ AP       
Sbjct: 11  SQLTIFYAGTVNVFDDIPADKAQAILLSARNG------VSVASNTAHRKVQAPGDGVPVS 64

Query: 258 XXXXXXXXXXXXXXXXVTSHASSQPGRGSSGNNELPMIRPAGPSTAP 304
                           ++SH  +Q G GS+  +E   ++  G  TAP
Sbjct: 65  QPSNAPHSSSHPSPVSISSHTGAQSGSGSTSTDEFLAVKATGVPTAP 111