Miyakogusa Predicted Gene

Lj0g3v0092449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0092449.1 Non Characterized Hit- tr|I1L8J5|I1L8J5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26870
PE,35.76,3e-19,seg,NULL; Tetraspannin,Tetraspanin/Peripherin;
SUBFAMILY NOT NAMED,NULL; TETRASPANIN,NULL,CUFF.5063.1
         (197 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g069185.1 | tetraspanin family protein | HC | chr1:2977881...   112   2e-25
Medtr5g014080.2 | tobamovirus multiplication protein 2A | HC | c...    91   5e-19
Medtr5g014080.1 | tobamovirus multiplication protein 2A | HC | c...    91   5e-19
Medtr5g014080.3 | tobamovirus multiplication protein 2A | HC | c...    91   5e-19
Medtr5g014080.5 | tobamovirus multiplication protein 2A | HC | c...    91   5e-19
Medtr5g014080.4 | tobamovirus multiplication protein 2A | HC | c...    91   5e-19
Medtr4g098860.2 | tetraspanin family protein | HC | chr4:4078902...    87   8e-18
Medtr4g098860.1 | tetraspanin family protein | HC | chr4:4078881...    87   8e-18

>Medtr1g069185.1 | tetraspanin family protein | HC |
           chr1:29778816-29783451 | 20130731
          Length = 249

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 15/147 (10%)

Query: 4   ILKRVNSVFGMAGLAMILYSAWMIRVWQRQMGELPFGH---------------DSDYPPP 48
           +LK +N +    GL+++LYS WM+  W     + P  H               D + P P
Sbjct: 13  LLKFLNFLQAFVGLSILLYSIWMLNQWDHFTPQPPLPHLSLSLPRSFSPQFTSDINLPAP 72

Query: 49  WFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFLNREWE 108
           WFIY F+ +G+  C I   G +AAE  NGCCL  Y V + +L++LEAA+   + ++R+W+
Sbjct: 73  WFIYAFMCVGILVCCIAFFGCIAAEIINGCCLCFYTVLITVLVLLEAALVAFIAIDRQWQ 132

Query: 109 EDFPKDPSGNFDQFKDFIRSNYEMCKW 135
           ED P DP+G     + FI  N ++ +W
Sbjct: 133 EDLPVDPTGQLASIRSFIEDNQDISRW 159


>Medtr5g014080.2 | tobamovirus multiplication protein 2A | HC |
           chr5:4658909-4665681 | 20130731
          Length = 289

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 56/90 (62%)

Query: 46  PPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFLNR 105
           P  WFIY F+G+G    V++C G + A T NGCCL  Y + V LLI++E      +F ++
Sbjct: 85  PKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLICYSILVALLILVELGCAAFLFFDK 144

Query: 106 EWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
            W+E+ P D +G+FD    F+R N+++ +W
Sbjct: 145 SWKEEIPTDKTGDFDMIYGFLRENWDIVRW 174


>Medtr5g014080.1 | tobamovirus multiplication protein 2A | HC |
           chr5:4658815-4665681 | 20130731
          Length = 289

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 56/90 (62%)

Query: 46  PPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFLNR 105
           P  WFIY F+G+G    V++C G + A T NGCCL  Y + V LLI++E      +F ++
Sbjct: 85  PKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLICYSILVALLILVELGCAAFLFFDK 144

Query: 106 EWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
            W+E+ P D +G+FD    F+R N+++ +W
Sbjct: 145 SWKEEIPTDKTGDFDMIYGFLRENWDIVRW 174


>Medtr5g014080.3 | tobamovirus multiplication protein 2A | HC |
           chr5:4658909-4665681 | 20130731
          Length = 289

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 56/90 (62%)

Query: 46  PPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFLNR 105
           P  WFIY F+G+G    V++C G + A T NGCCL  Y + V LLI++E      +F ++
Sbjct: 85  PKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLICYSILVALLILVELGCAAFLFFDK 144

Query: 106 EWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
            W+E+ P D +G+FD    F+R N+++ +W
Sbjct: 145 SWKEEIPTDKTGDFDMIYGFLRENWDIVRW 174


>Medtr5g014080.5 | tobamovirus multiplication protein 2A | HC |
           chr5:4658909-4665681 | 20130731
          Length = 289

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 56/90 (62%)

Query: 46  PPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFLNR 105
           P  WFIY F+G+G    V++C G + A T NGCCL  Y + V LLI++E      +F ++
Sbjct: 85  PKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLICYSILVALLILVELGCAAFLFFDK 144

Query: 106 EWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
            W+E+ P D +G+FD    F+R N+++ +W
Sbjct: 145 SWKEEIPTDKTGDFDMIYGFLRENWDIVRW 174


>Medtr5g014080.4 | tobamovirus multiplication protein 2A | HC |
           chr5:4658815-4665681 | 20130731
          Length = 289

 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 56/90 (62%)

Query: 46  PPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAAVTVDVFLNR 105
           P  WFIY F+G+G    V++C G + A T NGCCL  Y + V LLI++E      +F ++
Sbjct: 85  PKAWFIYLFIGVGAVLFVVSCFGCIGATTRNGCCLICYSILVALLILVELGCAAFLFFDK 144

Query: 106 EWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
            W+E+ P D +G+FD    F+R N+++ +W
Sbjct: 145 SWKEEIPTDKTGDFDMIYGFLRENWDIVRW 174


>Medtr4g098860.2 | tetraspanin family protein | HC |
           chr4:40789028-40782918 | 20130731
          Length = 280

 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 25/159 (15%)

Query: 2   QSILKRVNSVFGMAGLAMILYSAWMIRVWQR------------------QMGE-----LP 38
           + +LK +N +  + GLAM+ Y  +++  + R                  Q+G      LP
Sbjct: 8   ECLLKLLNFILTITGLAMVGYGIYLLVEFSRASDNSMMLSAPSDDQTLVQLGRPMLMALP 67

Query: 39  FGHD--SDYPPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAA 96
              +   + P  WFIY F+G+G    VI+C G +A+ T NGCCL  Y + VVLLI++E  
Sbjct: 68  LSDNIFDNLPKAWFIYLFIGVGAVLFVISCFGCIASMTRNGCCLSCYSILVVLLILVELG 127

Query: 97  VTVDVFLNREWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
               +F ++ W+E+ P+D +G+FD   +F+R N+ + KW
Sbjct: 128 CAAFIFFDKSWKEEIPRDKTGDFDMVYNFLRENWTIVKW 166


>Medtr4g098860.1 | tetraspanin family protein | HC |
           chr4:40788819-40782902 | 20130731
          Length = 280

 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 25/159 (15%)

Query: 2   QSILKRVNSVFGMAGLAMILYSAWMIRVWQR------------------QMGE-----LP 38
           + +LK +N +  + GLAM+ Y  +++  + R                  Q+G      LP
Sbjct: 8   ECLLKLLNFILTITGLAMVGYGIYLLVEFSRASDNSMMLSAPSDDQTLVQLGRPMLMALP 67

Query: 39  FGHD--SDYPPPWFIYTFLGLGVTFCVITCSGHVAAETANGCCLYLYMVFVVLLIMLEAA 96
              +   + P  WFIY F+G+G    VI+C G +A+ T NGCCL  Y + VVLLI++E  
Sbjct: 68  LSDNIFDNLPKAWFIYLFIGVGAVLFVISCFGCIASMTRNGCCLSCYSILVVLLILVELG 127

Query: 97  VTVDVFLNREWEEDFPKDPSGNFDQFKDFIRSNYEMCKW 135
               +F ++ W+E+ P+D +G+FD   +F+R N+ + KW
Sbjct: 128 CAAFIFFDKSWKEEIPRDKTGDFDMVYNFLRENWTIVKW 166