Miyakogusa Predicted Gene
- Lj0g3v0092409.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0092409.1 Non Characterized Hit- tr|I1LWH6|I1LWH6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,50,3e-19,GLYCOSYLATION ENZYME-LIKE PROTEIN,NULL;
GLYCOSYLTRANSFERASE 14 FAMILY MEMBER,NULL,gene.g7004.t1.1
(109 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g108280.1 | core-2/I-branching enzyme | HC | chr1:48932778... 177 2e-45
Medtr1g046740.1 | core-2/I-branching enzyme | HC | chr1:17641296... 88 2e-18
Medtr6g011080.1 | BGGP beta-1-3-galactosyl-O-glycosyl-glycoprote... 82 2e-16
Medtr4g022240.1 | core-2/I-branching enzyme | HC | chr4:7421156-... 82 2e-16
Medtr2g085300.1 | core-2/I-branching enzyme | HC | chr2:33229518... 80 4e-16
Medtr2g085300.2 | core-2/I-branching enzyme | HC | chr2:33229698... 80 4e-16
Medtr0072s0020.1 | core-2/I-branching enzyme | HC | scaffold0072... 80 4e-16
Medtr6g027550.1 | core-2/I-branching enzyme | HC | chr6:9538394-... 59 1e-09
Medtr7g086720.1 | core-2/I-branching enzyme | HC | chr7:33717214... 57 5e-09
Medtr4g008010.1 | core-2/I-branching enzyme | HC | chr4:1352266-... 52 1e-07
Medtr0662s0030.1 | core-2/I-branching enzyme | HC | scaffold0662... 52 1e-07
Medtr4g114140.1 | core-2/I-branching enzyme | HC | chr4:47025211... 50 6e-07
>Medtr1g108280.1 | core-2/I-branching enzyme | HC |
chr1:48932778-48928106 | 20130731
Length = 397
Score = 177 bits (449), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/102 (81%), Positives = 90/102 (88%), Gaps = 1/102 (0%)
Query: 1 MEPHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRG-RNRAVPGAWCSGRRSW 59
MEP LN SVY+ M ESGAAFARQF+ ++PVLDMID KIL+RG RNRA PGAWCSGRRSW
Sbjct: 296 MEPLFLNTSVYDMMAESGAAFARQFEANNPVLDMIDKKILQRGGRNRAAPGAWCSGRRSW 355
Query: 60 WVDPCSQWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQ 101
WVDPCSQW DVNILKPGPQAKKLE SVSSLLDDW++Q NQCQ
Sbjct: 356 WVDPCSQWGDVNILKPGPQAKKLEASVSSLLDDWTAQTNQCQ 397
>Medtr1g046740.1 | core-2/I-branching enzyme | HC |
chr1:17641296-17635727 | 20130731
Length = 439
Score = 87.8 bits (216), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 6 LNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCSGRRSWWVDPCS 65
LN + ++ M+ SGA FA++F DDPVLD+ID KIL R VPG WC G C
Sbjct: 346 LNSTDFDNMIHSGAVFAKKFQPDDPVLDLIDQKILNRSPGSVVPGGWCLGEPG--NSTCL 403
Query: 66 QWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQC 100
W D +IL+PG +K+LE+++ LL + + + QC
Sbjct: 404 TWGDASILRPGKGSKRLEKAIVELLSNGTFRSRQC 438
>Medtr6g011080.1 | BGGP beta-1-3-galactosyl-O-glycosyl-glycoprotein
| HC | chr6:3035128-3030995 | 20130731
Length = 433
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 56/98 (57%)
Query: 3 PHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCSGRRSWWVD 62
PH L V+ M +S A FAR+F +DPVLD ID ++L R VPG WC G R D
Sbjct: 335 PHYLTVADMKVMTDSNAPFARKFHREDPVLDRIDTELLSRNPGMPVPGGWCIGSRENGTD 394
Query: 63 PCSQWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQC 100
PCS + +L+P +K+LE ++ L+ + + + QC
Sbjct: 395 PCSVVGNTTVLRPENGSKRLETLITKLMSNENFRPRQC 432
>Medtr4g022240.1 | core-2/I-branching enzyme | HC |
chr4:7421156-7427008 | 20130731
Length = 419
Score = 81.6 bits (200), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/100 (39%), Positives = 58/100 (58%)
Query: 2 EPHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCSGRRSWWV 61
+P SL + + M SGA FAR+FD DDP+LD ID ++L R R PG WC G
Sbjct: 320 QPLSLKLEHFEDMAHSGAPFARRFDKDDPILDKIDRELLGRSDGRFTPGGWCLGNHLKGK 379
Query: 62 DPCSQWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQ 101
DPC + + +++ P ++K LE+ + LLD + + QC+
Sbjct: 380 DPCDVYGNPDVVNPSVRSKILEKLMLILLDSENFRPKQCK 419
>Medtr2g085300.1 | core-2/I-branching enzyme | HC |
chr2:33229518-33233089 | 20130731
Length = 424
Score = 80.1 bits (196), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 3 PHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCSGRRSWWVD 62
PH LN++ ++M+ SGAAFAR+F DDP +D+ID K+L++ G WCSG+
Sbjct: 331 PHILNINDTDKMIASGAAFARKFKQDDPAMDLIDKKLLKKRHGLFTLGGWCSGKPK---- 386
Query: 63 PCSQWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQ 101
C++ ++ LKPGP A++L++ ++ L S +QC+
Sbjct: 387 -CTEVGNMYKLKPGPGAQRLQKLIAGLTLKAKSGQDQCK 424
>Medtr2g085300.2 | core-2/I-branching enzyme | HC |
chr2:33229698-33233089 | 20130731
Length = 424
Score = 80.1 bits (196), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 3 PHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCSGRRSWWVD 62
PH LN++ ++M+ SGAAFAR+F DDP +D+ID K+L++ G WCSG+
Sbjct: 331 PHILNINDTDKMIASGAAFARKFKQDDPAMDLIDKKLLKKRHGLFTLGGWCSGKPK---- 386
Query: 63 PCSQWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQ 101
C++ ++ LKPGP A++L++ ++ L S +QC+
Sbjct: 387 -CTEVGNMYKLKPGPGAQRLQKLIAGLTLKAKSGQDQCK 424
>Medtr0072s0020.1 | core-2/I-branching enzyme | HC |
scaffold0072:9281-4015 | 20130731
Length = 433
Score = 80.1 bits (196), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 3 PHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCSGRRSWWVD 62
P SL + +++M +S A FAR+F DDPVLD ID ++L R +R PGAWC G D
Sbjct: 337 PMSLTMKNFDKMAKSNAPFARKFARDDPVLDKIDKELLGR-THRFSPGAWCIGSSDGGAD 395
Query: 63 PCSQWNDVNILKPGPQAKKLEESVSSLLDD 92
PCS + + +PGP A KL E + LL D
Sbjct: 396 PCSLRGNDTVFRPGPGADKLHELLQVLLSD 425
>Medtr6g027550.1 | core-2/I-branching enzyme | HC |
chr6:9538394-9535713 | 20130731
Length = 317
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 2 EPHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCS-----GR 56
P SL + Y +MV S FAR+F +D VLD ID ++LRR R + G WCS G+
Sbjct: 215 HPRSLTLKDYRKMVLSNRPFARKFKKNDIVLDKIDRELLRRNRGQFSFGGWCSSSSQGGK 274
Query: 57 RSWWVDPCS--QWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQ 101
+ C + + +LKP +KK++ +S+++ + + QC+
Sbjct: 275 KR----ACHSLKIENYGVLKPSLASKKMKNMISNIISFKNLRKQQCR 317
>Medtr7g086720.1 | core-2/I-branching enzyme | HC |
chr7:33717214-33721328 | 20130731
Length = 399
Score = 56.6 bits (135), Expect = 5e-09, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 6/102 (5%)
Query: 3 PHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCS-GRRSWWV 61
P SL + Y +MV S FAR+F ++ VLD ID +L+R + G WCS G R+
Sbjct: 301 PRSLGLKDYRKMVLSSRPFARKFKRNNIVLDKIDRDLLKRYKGGFSFGGWCSQGGRN--- 357
Query: 62 DPCS--QWNDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQ 101
CS + + +LKPGP +++L+ ++ +L D + QC+
Sbjct: 358 KACSGLRAENYGLLKPGPGSRRLKNLLNKILMDKFFRQMQCR 399
>Medtr4g008010.1 | core-2/I-branching enzyme | HC |
chr4:1352266-1355362 | 20130731
Length = 411
Score = 52.4 bits (124), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 6 LNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCSGRRSWWVDPCS 65
L++S Y+ M+E+GA FAR F D VL+ ID +L R N V G WCS + ++ +
Sbjct: 311 LDMSHYDTMMETGAVFARPFGEGDLVLEKIDDLVLNRTLNGFVQGEWCSS-SNLEINKTT 369
Query: 66 QW--NDVNILKPGPQAKKLEESVSSLLDDWSSQINQCQ 101
+++++KPG KL + +++ + QCQ
Sbjct: 370 NLVSGNIDVVKPGMFGIKLRTLLGEIVNSGRYRDCQCQ 407
>Medtr0662s0030.1 | core-2/I-branching enzyme | HC |
scaffold0662:4225-6508 | 20130731
Length = 292
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 2 EPHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCS 54
PH L Y MVES A F R+F ++P+LD ID ++L R + VPG W S
Sbjct: 223 HPHFLTAEHYWSMVESNAPFGRKFGRNEPLLDKIDTELLGRNADGYVPGMWFS 275
>Medtr4g114140.1 | core-2/I-branching enzyme | HC |
chr4:47025211-47028228 | 20130731
Length = 391
Score = 49.7 bits (117), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 3 PHSLNVSVYNQMVESGAAFARQFDVDDPVLDMIDAKILRRGRNRAVPGAWCS 54
PH L Y MVES A F R+F ++P+LD ID ++L R + VPG W S
Sbjct: 323 PHFLTAEHYWSMVESNAPFGRKFGRNEPLLDKIDTELLGRNADGYVPGMWFS 374