Miyakogusa Predicted Gene
- Lj0g3v0092249.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0092249.1 Non Characterized Hit- tr|Q56WQ5|Q56WQ5_ARATH
Putative uncharacterized protein At1g19400
OS=Arabidop,70,3e-17,seg,NULL; 2-HYDROXYACID DEHYDROGENASE,NULL;
2-HYDROXYACID DEHYDROGENASE-RELATED,NULL,CUFF.5046.1
(316 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g022190.4 | erythronate-4-phosphate dehydrogenase family p... 373 e-103
Medtr1g022190.1 | erythronate-4-phosphate dehydrogenase family p... 372 e-103
Medtr1g022190.2 | erythronate-4-phosphate dehydrogenase family p... 372 e-103
Medtr1g022190.3 | erythronate-4-phosphate dehydrogenase family p... 303 2e-82
Medtr4g070020.2 | erythronate-4-phosphate dehydrogenase family p... 259 2e-69
Medtr4g070020.1 | erythronate-4-phosphate dehydrogenase family p... 259 2e-69
Medtr4g070020.3 | erythronate-4-phosphate dehydrogenase family p... 230 1e-60
Medtr8g028630.1 | erythronate-4-phosphate dehydrogenase family p... 149 3e-36
>Medtr1g022190.4 | erythronate-4-phosphate dehydrogenase family
protein | HC | chr1:6938459-6934779 | 20130731
Length = 337
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/323 (63%), Positives = 242/323 (74%), Gaps = 18/323 (5%)
Query: 1 MNMEGPYEASSYNG-ESAHRILQMIKPSPYKP-CTKLSSS--WFDMRVFFVRVSGFQVDE 56
M M G Y+ASS NG E+ ++ LQ+I+ SPY P C KLS S WFD+RVF+VRVSG QV+E
Sbjct: 26 MKMGGSYDASSCNGGEARNKSLQIIEYSPYDPSCIKLSFSLPWFDVRVFYVRVSGIQVNE 85
Query: 57 TTPEFLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRNRVDRKSEEATFVNTDSIRL 116
+TP+FL+L+H PLS DTLLEVNGVRSSM +DE +SS+LRR+R+D+KSE+ TFVNTDSIRL
Sbjct: 86 STPQFLYLHHIPLSLDTLLEVNGVRSSMNSDE-DSSILRRDRIDKKSEQVTFVNTDSIRL 144
Query: 117 TGSVKFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKWSMNCHTEMTSNSGFFRGKH 176
GS+KFEV D KD C+L S VLEM N + ++ + WSMNC TEM SNSGFF+GKH
Sbjct: 145 NGSMKFEVCD-KDQCIL-SCVLEMKNHD-------NDKRYWSMNCETEMASNSGFFKGKH 195
Query: 177 VAVPEIEVYVAGCFSGTPIILTKTLQLNCRKKHNRK-CTLDVIPEYESAECHKDV--PHN 233
V+VPEIEVYVAGCFSG PIILT+TLQ+NCRKKHNRK C LDVIPEYE++E KDV +
Sbjct: 196 VSVPEIEVYVAGCFSGKPIILTRTLQINCRKKHNRKMCMLDVIPEYETSEIKKDVCDHDH 255
Query: 234 GLHLQVAAECRSFKPEHEGDFSSMYWQRTDSIDLEEGELSWFNAXXXXXXXXXXXXXXXX 293
GL QV E RSFKPE E +++MY QR ID+E+GELSWFNA
Sbjct: 256 GLDSQV-TEYRSFKPEQEEHYNNMYCQREGYIDMEDGELSWFNAGVRVGVGIGLGIFVGV 314
Query: 294 XXXXSLLARSYQATTRSFKRRFI 316
SLLARSYQ TTRSFKRRFI
Sbjct: 315 GIGVSLLARSYQTTTRSFKRRFI 337
>Medtr1g022190.1 | erythronate-4-phosphate dehydrogenase family
protein | HC | chr1:6938822-6934799 | 20130731
Length = 342
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/323 (63%), Positives = 242/323 (74%), Gaps = 18/323 (5%)
Query: 1 MNMEGPYEASSYNG-ESAHRILQMIKPSPYKP-CTKLSSS--WFDMRVFFVRVSGFQVDE 56
M M G Y+ASS NG E+ ++ LQ+I+ SPY P C KLS S WFD+RVF+VRVSG QV+E
Sbjct: 31 MKMGGSYDASSCNGGEARNKSLQIIEYSPYDPSCIKLSFSLPWFDVRVFYVRVSGIQVNE 90
Query: 57 TTPEFLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRNRVDRKSEEATFVNTDSIRL 116
+TP+FL+L+H PLS DTLLEVNGVRSSM +DE +SS+LRR+R+D+KSE+ TFVNTDSIRL
Sbjct: 91 STPQFLYLHHIPLSLDTLLEVNGVRSSMNSDE-DSSILRRDRIDKKSEQVTFVNTDSIRL 149
Query: 117 TGSVKFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKWSMNCHTEMTSNSGFFRGKH 176
GS+KFEV D KD C+L S VLEM N + ++ + WSMNC TEM SNSGFF+GKH
Sbjct: 150 NGSMKFEVCD-KDQCIL-SCVLEMKNHD-------NDKRYWSMNCETEMASNSGFFKGKH 200
Query: 177 VAVPEIEVYVAGCFSGTPIILTKTLQLNCRKKHNRK-CTLDVIPEYESAECHKDV--PHN 233
V+VPEIEVYVAGCFSG PIILT+TLQ+NCRKKHNRK C LDVIPEYE++E KDV +
Sbjct: 201 VSVPEIEVYVAGCFSGKPIILTRTLQINCRKKHNRKMCMLDVIPEYETSEIKKDVCDHDH 260
Query: 234 GLHLQVAAECRSFKPEHEGDFSSMYWQRTDSIDLEEGELSWFNAXXXXXXXXXXXXXXXX 293
GL QV E RSFKPE E +++MY QR ID+E+GELSWFNA
Sbjct: 261 GLDSQV-TEYRSFKPEQEEHYNNMYCQREGYIDMEDGELSWFNAGVRVGVGIGLGIFVGV 319
Query: 294 XXXXSLLARSYQATTRSFKRRFI 316
SLLARSYQ TTRSFKRRFI
Sbjct: 320 GIGVSLLARSYQTTTRSFKRRFI 342
>Medtr1g022190.2 | erythronate-4-phosphate dehydrogenase family
protein | HC | chr1:6938296-6934779 | 20130731
Length = 312
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 243/323 (75%), Gaps = 18/323 (5%)
Query: 1 MNMEGPYEASSYNG-ESAHRILQMIKPSPYKP-CTKLSSS--WFDMRVFFVRVSGFQVDE 56
M M G Y+ASS NG E+ ++ LQ+I+ SPY P C KLS S WFD+RVF+VRVSG QV+E
Sbjct: 1 MKMGGSYDASSCNGGEARNKSLQIIEYSPYDPSCIKLSFSLPWFDVRVFYVRVSGIQVNE 60
Query: 57 TTPEFLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRNRVDRKSEEATFVNTDSIRL 116
+TP+FL+L+H PLS DTLLEVNGVRSSM +DE +SS+LRR+R+D+KSE+ TFVNTDSIRL
Sbjct: 61 STPQFLYLHHIPLSLDTLLEVNGVRSSMNSDE-DSSILRRDRIDKKSEQVTFVNTDSIRL 119
Query: 117 TGSVKFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKWSMNCHTEMTSNSGFFRGKH 176
GS+KFEV D KD C+L S VLEM N + ++ + WSMNC TEM SNSGFF+GKH
Sbjct: 120 NGSMKFEVCD-KDQCIL-SCVLEMKNHD-------NDKRYWSMNCETEMASNSGFFKGKH 170
Query: 177 VAVPEIEVYVAGCFSGTPIILTKTLQLNCRKKHNRK-CTLDVIPEYESAECHKDV-PHN- 233
V+VPEIEVYVAGCFSG PIILT+TLQ+NCRKKHNRK C LDVIPEYE++E KDV H+
Sbjct: 171 VSVPEIEVYVAGCFSGKPIILTRTLQINCRKKHNRKMCMLDVIPEYETSEIKKDVCDHDH 230
Query: 234 GLHLQVAAECRSFKPEHEGDFSSMYWQRTDSIDLEEGELSWFNAXXXXXXXXXXXXXXXX 293
GL QV E RSFKPE E +++MY QR ID+E+GELSWFNA
Sbjct: 231 GLDSQV-TEYRSFKPEQEEHYNNMYCQREGYIDMEDGELSWFNAGVRVGVGIGLGIFVGV 289
Query: 294 XXXXSLLARSYQATTRSFKRRFI 316
SLLARSYQ TTRSFKRRFI
Sbjct: 290 GIGVSLLARSYQTTTRSFKRRFI 312
>Medtr1g022190.3 | erythronate-4-phosphate dehydrogenase family
protein | HC | chr1:6938410-6934779 | 20130731
Length = 266
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 163/246 (66%), Positives = 196/246 (79%), Gaps = 17/246 (6%)
Query: 1 MNMEGPYEASSYNG-ESAHRILQMIKPSPYKP-CTKLSSS--WFDMRVFFVRVSGFQVDE 56
M M G Y+ASS NG E+ ++ LQ+I+ SPY P C KLS S WFD+RVF+VRVSG QV+E
Sbjct: 26 MKMGGSYDASSCNGGEARNKSLQIIEYSPYDPSCIKLSFSLPWFDVRVFYVRVSGIQVNE 85
Query: 57 TTPEFLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRNRVDRKSEEATFVNTDSIRL 116
+TP+FL+L+H PLS DTLLEVNGVRSSM +DE +SS+LRR+R+D+KSE+ TFVNTDSIRL
Sbjct: 86 STPQFLYLHHIPLSLDTLLEVNGVRSSMNSDE-DSSILRRDRIDKKSEQVTFVNTDSIRL 144
Query: 117 TGSVKFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKWSMNCHTEMTSNSGFFRGKH 176
GS+KFEV D KD C+L S VLEM N + ++ + WSMNC TEM SNSGFF+GKH
Sbjct: 145 NGSMKFEVCD-KDQCIL-SCVLEMKNHD-------NDKRYWSMNCETEMASNSGFFKGKH 195
Query: 177 VAVPEIEVYVAGCFSGTPIILTKTLQLNCRKKHNRK-CTLDVIPEYESAECHKDV--PHN 233
V+VPEIEVYVAGCFSG PIILT+TLQ+NCRKKHNRK C LDVIPEYE++E KDV +
Sbjct: 196 VSVPEIEVYVAGCFSGKPIILTRTLQINCRKKHNRKMCMLDVIPEYETSEIKKDVCDHDH 255
Query: 234 GLHLQV 239
GL QV
Sbjct: 256 GLDSQV 261
>Medtr4g070020.2 | erythronate-4-phosphate dehydrogenase family
protein | HC | chr4:26351589-26347906 | 20130731
Length = 311
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 195/318 (61%), Gaps = 13/318 (4%)
Query: 3 MEGPYEASSYNGESAHRILQMIKPSPYKPCTKLSSSWFDMRVFFVRVSGFQVDETTPEFL 62
ME Y+ + NG S + Y+P K S W D+RVF+VRV ++D +TPE L
Sbjct: 1 MENSYKVNG-NGPSENGYSIAKHTHSYQPSIKGSLPWLDIRVFYVRVCKCELDNSTPEIL 59
Query: 63 HLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRNRVDRKSEEATFVNTDSIRLTGSVKF 122
LNH PL+PDTLLEVNGVRS +Y+D G S++L+R+RVDRKSEE TFV+TDSIR++GSVKF
Sbjct: 60 TLNHVPLNPDTLLEVNGVRSGLYSD-GISTLLKRDRVDRKSEEVTFVSTDSIRMSGSVKF 118
Query: 123 EVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKWSMNCHTEMTSNSGFFRGKHVAVPE- 181
EV+ DKD +LL G LE+ N NG V ES SN + WSM C + + + FF+ K + +P+
Sbjct: 119 EVF-DKDK-LLLFGTLELCNSNGVVRESNSNGQSWSMKCESNIIPGTKFFKEKQLLLPDS 176
Query: 182 ----IEVYVAGCFSGTPIILTKTLQLNCRKKHNRKCTLDVIPEYESAECHKDVPHNGLHL 237
IEVY+AG FSGTPIILTKTL L+ +K+H RK L+ IPE ++ E K P + L L
Sbjct: 177 TLPTIEVYIAGSFSGTPIILTKTLHLSSQKRHTRKPALNAIPENDANENGKG-PSSVLAL 235
Query: 238 QVAAECRSFKPEHEGDFSSMYWQRTDSIDLEEGELSWFNAXXXXXXXXXXXXXXXXXXXX 297
Q A + + D+ +Y RT D E+GELSWFNA
Sbjct: 236 Q--APDYMYDKHDDEDYHGLY-TRTAYADGEDGELSWFNAGVRVGVGIGLSVCLGIGIGV 292
Query: 298 SLLARSYQATTRSFKRRF 315
+L +SYQ T F+RR
Sbjct: 293 GILVKSYQGATGQFRRRL 310
>Medtr4g070020.1 | erythronate-4-phosphate dehydrogenase family
protein | HC | chr4:26351066-26347906 | 20130731
Length = 311
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/318 (46%), Positives = 195/318 (61%), Gaps = 13/318 (4%)
Query: 3 MEGPYEASSYNGESAHRILQMIKPSPYKPCTKLSSSWFDMRVFFVRVSGFQVDETTPEFL 62
ME Y+ + NG S + Y+P K S W D+RVF+VRV ++D +TPE L
Sbjct: 1 MENSYKVNG-NGPSENGYSIAKHTHSYQPSIKGSLPWLDIRVFYVRVCKCELDNSTPEIL 59
Query: 63 HLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRNRVDRKSEEATFVNTDSIRLTGSVKF 122
LNH PL+PDTLLEVNGVRS +Y+D G S++L+R+RVDRKSEE TFV+TDSIR++GSVKF
Sbjct: 60 TLNHVPLNPDTLLEVNGVRSGLYSD-GISTLLKRDRVDRKSEEVTFVSTDSIRMSGSVKF 118
Query: 123 EVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKWSMNCHTEMTSNSGFFRGKHVAVPE- 181
EV+ DKD +LL G LE+ N NG V ES SN + WSM C + + + FF+ K + +P+
Sbjct: 119 EVF-DKDK-LLLFGTLELCNSNGVVRESNSNGQSWSMKCESNIIPGTKFFKEKQLLLPDS 176
Query: 182 ----IEVYVAGCFSGTPIILTKTLQLNCRKKHNRKCTLDVIPEYESAECHKDVPHNGLHL 237
IEVY+AG FSGTPIILTKTL L+ +K+H RK L+ IPE ++ E K P + L L
Sbjct: 177 TLPTIEVYIAGSFSGTPIILTKTLHLSSQKRHTRKPALNAIPENDANENGKG-PSSVLAL 235
Query: 238 QVAAECRSFKPEHEGDFSSMYWQRTDSIDLEEGELSWFNAXXXXXXXXXXXXXXXXXXXX 297
Q A + + D+ +Y RT D E+GELSWFNA
Sbjct: 236 Q--APDYMYDKHDDEDYHGLY-TRTAYADGEDGELSWFNAGVRVGVGIGLSVCLGIGIGV 292
Query: 298 SLLARSYQATTRSFKRRF 315
+L +SYQ T F+RR
Sbjct: 293 GILVKSYQGATGQFRRRL 310
>Medtr4g070020.3 | erythronate-4-phosphate dehydrogenase family
protein | HC | chr4:26351589-26349194 | 20130731
Length = 254
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/215 (55%), Positives = 155/215 (72%), Gaps = 9/215 (4%)
Query: 29 YKPCTKLSSSWFDMRVFFVRVSGFQVDETTPEFLHLNHTPLSPDTLLEVNGVRSSMYTDE 88
Y+P K S W D+RVF+VRV ++D +TPE L LNH PL+PDTLLEVNGVRS +Y+D
Sbjct: 26 YQPSIKGSLPWLDIRVFYVRVCKCELDNSTPEILTLNHVPLNPDTLLEVNGVRSGLYSD- 84
Query: 89 GESSVLRRNRVDRKSEEATFVNTDSIRLTGSVKFEVYDDKDHCVLLSGVLEMSNGNGFVE 148
G S++L+R+RVDRKSEE TFV+TDSIR++GSVKFEV+ DKD +LL G LE+ N NG V
Sbjct: 85 GISTLLKRDRVDRKSEEVTFVSTDSIRMSGSVKFEVF-DKDK-LLLFGTLELCNSNGVVR 142
Query: 149 ESRSNAKKWSMNCHTEMTSNSGFFRGKHVAVPE-----IEVYVAGCFSGTPIILTKTLQL 203
ES SN + WSM C + + + FF+ K + +P+ IEVY+AG FSGTPIILTKTL L
Sbjct: 143 ESNSNGQSWSMKCESNIIPGTKFFKEKQLLLPDSTLPTIEVYIAGSFSGTPIILTKTLHL 202
Query: 204 NCRKKHNRKCTLDVIPEYESAECHKDVPHNGLHLQ 238
+ +K+H RK L+ IPE ++ E K P + L LQ
Sbjct: 203 SSQKRHTRKPALNAIPENDANENGKG-PSSVLALQ 236
>Medtr8g028630.1 | erythronate-4-phosphate dehydrogenase family
protein | HC | chr8:10986787-10991352 | 20130731
Length = 350
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 152/291 (52%), Gaps = 28/291 (9%)
Query: 38 SWFDMRVFFVRVSGFQVDETTPEFLHLNHTPLSPDTLLEVNGVRSSMYTDEGESSVLRRN 97
SW ++R+F+VR+S +D + PE L L H L +NG + LRR+
Sbjct: 25 SWLEIRLFYVRISPCLID-SVPECLTLCHPKREIGFSLVINGSPIPAPSSA-PPLPLRRD 82
Query: 98 RVDRKSEEATFVNTDSIRLTGSVKFEVYDDKDHCVLLSGVLEMSNGNGFVEESRSNAKKW 157
RVD++S E T+V+TD++R+TG +FEVY+ KD + L G LE ++ N W
Sbjct: 83 RVDKESAEVTYVSTDNVRITGGAEFEVYE-KD-VLFLCGSLER------LDVDLGNGSGW 134
Query: 158 SMNCHTEMTS----NSGFFRGK-HVAVPEIEVYVAGCFSGTPIILTKTLQLNCRKKHNRK 212
M+CH + S +S FFR K V+ P +EVYVAGC SG P+IL+KT+ L+ R++ R
Sbjct: 135 DMDCHVAVGSIGSGSSAFFRPKLGVSAPSVEVYVAGCCSGVPVILSKTISLSPRRRVPRH 194
Query: 213 CTLDVIPEYESAE-CHKD--------VPHNGLHLQVAAECRSFKPEHEGDFSSMYWQRTD 263
LD IPE E KD +PH L + +A + +G ++ ++ +
Sbjct: 195 AILDAIPEDEEMNMMEKDHVSAMNGLIPHPKLQITGSA---VDDYDLDGKMANGFYSQEM 251
Query: 264 SIDLEEGELSWFNAXXXXXXXXXXXXXXXXXXXXSLLARSYQATTRSFKRR 314
+ E+G+L+WFNA LL RSYQ TTR+F+RR
Sbjct: 252 YLG-EDGQLTWFNAGVRVGVGIGLGVCVGLGIGVGLLMRSYQTTTRNFRRR 301