Miyakogusa Predicted Gene

Lj0g3v0091689.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091689.1 tr|E9LK41|E9LK41_VITVI Copper transporter
OS=Vitis vinifera GN=CTr4 PE=2 SV=1,41.67,2e-19,seg,NULL; Ctr,Ctr
copper transporter; COPPER TRANSPORTER,NULL; SOLUTE CARRIER FAMILY 31
(COPPER TRAN,CUFF.5004.1
         (160 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g066070.1 | Ctr family copper transporter | HC | chr7:2402...   164   3e-41
Medtr4g019870.1 | Ctr family copper transporter | HC | chr4:6326...   150   5e-37
Medtr4g064963.1 | Ctr family copper transporter | HC | chr4:2429...   110   6e-25
Medtr4g065660.1 | Ctr family copper transporter | HC | chr4:2451...   110   7e-25
Medtr4g065123.1 | Ctr family copper transporter | HC | chr4:2450...    98   3e-21
Medtr0027s0220.1 | Ctr family copper transporter | HC | scaffold...    94   7e-20
Medtr1g015000.1 | Ctr family copper transporter | HC | chr1:3664...    65   2e-11
Medtr3g105330.1 | Ctr family copper transporter | HC | chr3:4855...    53   1e-07

>Medtr7g066070.1 | Ctr family copper transporter | HC |
           chr7:24028382-24026681 | 20130731
          Length = 145

 Score =  164 bits (416), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/115 (69%), Positives = 96/115 (83%)

Query: 28  MKMRMRMNLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIKRRTTPI 87
           M M M+M+ +WGK+AIVLFS WPN+S+GMY+LAIL VF LA+ AEVLSNQP IKR T P+
Sbjct: 18  MIMNMQMSFFWGKNAIVLFSGWPNNSLGMYILAILFVFILALAAEVLSNQPSIKRGTNPL 77

Query: 88  VGALTQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQSRALALAN 142
            G L Q+  Y FRISF YL+MLAVMSFN+GIFIAAV GH+LGFF A+SRA+A+AN
Sbjct: 78  KGGLIQSGVYFFRISFIYLLMLAVMSFNVGIFIAAVLGHSLGFFVARSRAIAVAN 132


>Medtr4g019870.1 | Ctr family copper transporter | HC |
           chr4:6326032-6325167 | 20130731
          Length = 137

 Score =  150 bits (379), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 73/119 (61%), Positives = 88/119 (73%)

Query: 25  LVKMKMRMRMNLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIKRRT 84
           ++K  M+M MNLYWGKDAI+LF  WPN S+GMY+LA+  VFFLA++ E L N+  IK+ T
Sbjct: 6   MMKEDMKMHMNLYWGKDAIILFPGWPNQSLGMYILALSFVFFLALVVEFLPNKSTIKQGT 65

Query: 85  TPIVGALTQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQSRALALANK 143
             I G L QA  Y FRISF YLVMLAVMSFN+GIFIAAV GH +GFF  +S  +  ANK
Sbjct: 66  NHIKGGLIQAIIYFFRISFLYLVMLAVMSFNIGIFIAAVVGHTIGFFLVKSHDIFAANK 124


>Medtr4g064963.1 | Ctr family copper transporter | HC |
           chr4:24296302-24295511 | 20130731
          Length = 165

 Score =  110 bits (275), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 69/99 (69%)

Query: 37  YWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIKRRTTPIVGALTQATT 96
           +WGKDA++LF+ WPN   GMY+LA++LVF +A+L E+LS    IK  +  +   L Q   
Sbjct: 48  FWGKDALILFNNWPNGDTGMYVLALILVFVMAVLIELLSRTRFIKPGSNHVAAGLFQTLL 107

Query: 97  YVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQS 135
           +V R+  +YLVMLA+MSFN G+F+ AV GHALGFF   S
Sbjct: 108 HVLRVGLAYLVMLALMSFNGGVFLVAVLGHALGFFLCSS 146


>Medtr4g065660.1 | Ctr family copper transporter | HC |
           chr4:24511543-24510225 | 20130731
          Length = 153

 Score =  110 bits (274), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 73/101 (72%), Gaps = 1/101 (0%)

Query: 37  YWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIKRRTTPIVGALTQATT 96
           +WGKDA++LF  WP  + G Y+LA++LVF +++L E LS+   IK  + PIV  L Q   
Sbjct: 37  FWGKDALILFDNWPAGNSGKYVLALILVFAMSILIEFLSSTRFIKPGSNPIVAGLVQTLL 96

Query: 97  YVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQSRA 137
           +V R+  +YLVMLA+MSFN G+F+ AV GHA+GFFF +SRA
Sbjct: 97  HVLRVGLAYLVMLALMSFNGGVFLVAVLGHAVGFFF-RSRA 136


>Medtr4g065123.1 | Ctr family copper transporter | HC |
           chr4:24509045-24508579 | 20130731
          Length = 141

 Score = 98.2 bits (243), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 73/112 (65%), Gaps = 2/112 (1%)

Query: 26  VKMKMRMRMNLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIKRRTT 85
           +KM+  + M  +WGKD+++LF+ WP  +   Y++A+ ++F  +ML E+LS  P  K  + 
Sbjct: 22  LKMQGMIHMTFFWGKDSLILFNNWPAGNTSKYVMALFMIFIASMLMELLSYTPF-KPGSN 80

Query: 86  PIVGALTQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQSRA 137
            +V  L Q   +V R+  +YL+MLA+MSFN G+F+  V GHALGFF   SRA
Sbjct: 81  RMVAGLVQTLLHVLRVGLAYLIMLALMSFNGGVFLVVVLGHALGFFVC-SRA 131


>Medtr0027s0220.1 | Ctr family copper transporter | HC |
           scaffold0027:120533-119940 | 20130731
          Length = 149

 Score = 93.6 bits (231), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/118 (39%), Positives = 74/118 (62%), Gaps = 3/118 (2%)

Query: 24  LLVKMKMRMRMNLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLIKRR 83
           +L + ++ +  + YWG +  +LF  WP  S  MY +A++LVF +++L E LS   ++K +
Sbjct: 19  MLGRRRIPIHTSFYWGHNVDILFHCWPGDSAVMYAVALILVFVMSLLVEWLSFTNIVKVK 78

Query: 84  ---TTPIVGALTQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFFFAQSRAL 138
              +  +VG+L +   Y  R  FSYLVMLAVMSFN G+F+AA+ GH +GF    + A+
Sbjct: 79  PGTSNDVVGSLLRTGLYGVRTGFSYLVMLAVMSFNGGVFLAAIGGHVIGFMVFGTMAI 136


>Medtr1g015000.1 | Ctr family copper transporter | HC |
           chr1:3664002-3664639 | 20130731
          Length = 142

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 20/126 (15%)

Query: 32  MRMNLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQPLI------KRRTT 85
           M M LYWGK+  +LF  W  +S   Y+L+++  F +A   + L N  +       + RTT
Sbjct: 2   MHMTLYWGKNVTLLFDSWKTNSWTSYLLSLIACFIIATFYQYLENLRIRLKFFSGEGRTT 61

Query: 86  PI--------------VGALTQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHALGFF 131
           P+                 + ++  +    +  YL+MLA+MSFN G+F+A V G   G+F
Sbjct: 62  PVPEIRTPLLGLNKVSRNKVVESVLFGVNSAIGYLLMLAIMSFNGGVFLAIVVGLTFGYF 121

Query: 132 FAQSRA 137
             +S+ 
Sbjct: 122 LFRSQG 127


>Medtr3g105330.1 | Ctr family copper transporter | HC |
           chr3:48558375-48557635 | 20130731
          Length = 143

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 25/128 (19%)

Query: 32  MRMNLYWGKDAIVLFSEWPNHSVGMYMLAILLVFFLAMLAEVLSNQ-------------- 77
           M M  YW K   +LF  W   S   Y L++L    +++  + L N+              
Sbjct: 2   MHMTFYWSKKVTLLFDSWKTDSWTSYALSLLACLIVSIFYQFLENRRIRLKLLASGKPFP 61

Query: 78  -----PLIKRRTTPIVGA-----LTQATTYVFRISFSYLVMLAVMSFNLGIFIAAVAGHA 127
                PL+ RRT    GA     +  A  +    +  Y +ML+VMS+N G+FIA V G A
Sbjct: 62  AAIEAPLL-RRTFAGSGAKLGVRVAGAVLFGLSSAIGYFLMLSVMSYNGGVFIAIVVGLA 120

Query: 128 LGFFFAQS 135
           +G+   +S
Sbjct: 121 VGYLLFRS 128