Miyakogusa Predicted Gene

Lj0g3v0091559.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091559.1 tr|Q9SRQ0|Q9SRQ0_ARATH T21P5.12 protein
OS=Arabidopsis thaliana GN=T21P5.12 PE=2
SV=1,55.65,2e-19,coiled-coil,NULL; GLIOMA TUMOR SUPPRESSOR CANDIDATE
REGION GENE 1,NULL; seg,NULL,CUFF.4989.1
         (157 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0004s0240.1 | hypothetical protein | HC | scaffold0004:1020...    94   4e-20

>Medtr0004s0240.1 | hypothetical protein | HC |
           scaffold0004:102002-96075 | 20130731
          Length = 354

 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 53/107 (49%), Positives = 55/107 (51%), Gaps = 19/107 (17%)

Query: 54  ISRFPSNIDAHLR----XXXXXXXXXXXXXXXXXXXXXXXXXSNHLXXXXXXXXXXXXXX 109
           ISRFPSNIDAHLR                             SNH               
Sbjct: 54  ISRFPSNIDAHLRPIRPPLNLQQNPNPNPNSNPILNLHQNPNSNH--------------- 98

Query: 110 XXXXXXKMVRPGNPMELQMAYQDAWRVCHPDFKRPFSSLEDACERFI 156
                 KM+RPGN MELQMAYQDAWRVCHPDFKRPFSSLEDACER +
Sbjct: 99  QQQQQQKMIRPGNQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLL 145