Miyakogusa Predicted Gene

Lj0g3v0091109.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091109.1 Non Characterized Hit- tr|I3S419|I3S419_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.78,0,seg,NULL;
NAC_AB,Nascent polypeptide-associated complex NAC; NAC,Nascent
polypeptide-associated comp,CUFF.5124.1
         (164 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g020660.1 | BTF3b-like transcription factor | HC | chr3:59...   233   7e-62
Medtr4g071000.1 | BTF3b-like transcription factor | HC | chr4:26...   231   3e-61
Medtr3g020520.1 | NB-ARC domain protein | LC | chr3:5932433-5928...   194   4e-50
Medtr3g020640.1 | disease resistance protein (TIR-NBS-LRR class)...   176   1e-44
Medtr3g020650.1 | disease resistance protein (TIR-NBS-LRR class)...   136   8e-33

>Medtr3g020660.1 | BTF3b-like transcription factor | HC |
           chr3:5988982-5985577 | 20130731
          Length = 159

 Score =  233 bits (594), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 119/141 (84%), Positives = 121/141 (85%), Gaps = 3/141 (2%)

Query: 1   MKMAGSVXXXXXXXXXXXXXAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVI 60
           MKMAGSV             AVHKT TTDDKRLQSTLKRIGVN IPAIEEVNIFKDDVVI
Sbjct: 7   MKMAGSVRTGGKGTVRRKKKAVHKTATTDDKRLQSTLKRIGVNGIPAIEEVNIFKDDVVI 66

Query: 61  QFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIQQLGPDNLENLKKLAEQFQKQAPEA 120
           QFLNPKVQASIAANTWVVSGSPQTKKLQDILP+II QLGPDNLENLKKLAEQFQKQAPEA
Sbjct: 67  QFLNPKVQASIAANTWVVSGSPQTKKLQDILPNIIHQLGPDNLENLKKLAEQFQKQAPEA 126

Query: 121 GA---TAQEEDDDAVPDLVPG 138
           GA    AQE+DDDAVPDLVPG
Sbjct: 127 GADATAAQEDDDDAVPDLVPG 147


>Medtr4g071000.1 | BTF3b-like transcription factor | HC |
           chr4:26746695-26743824 | 20130731
          Length = 160

 Score =  231 bits (589), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 118/141 (83%), Positives = 121/141 (85%), Gaps = 3/141 (2%)

Query: 1   MKMAGSVXXXXXXXXXXXXXAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVI 60
           MKMAGSV             AVHKTTTTDDKRLQSTLKRIGVNAIP IEEVNIFKDDVVI
Sbjct: 7   MKMAGSVRTGGKGTVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPQIEEVNIFKDDVVI 66

Query: 61  QFLNPKVQASIAANTWVVSGSPQTKKLQDILPSIIQQLGPDNLENLKKLAEQFQKQAPEA 120
           QFLNPKVQASIAANTWVVSG+PQTKKLQDILPSII QLGPDNLENLKK+AEQFQKQAPEA
Sbjct: 67  QFLNPKVQASIAANTWVVSGAPQTKKLQDILPSIIHQLGPDNLENLKKIAEQFQKQAPEA 126

Query: 121 G---ATAQEEDDDAVPDLVPG 138
           G   AT QEE+DD VPDLVPG
Sbjct: 127 GTGSATVQEENDDDVPDLVPG 147


>Medtr3g020520.1 | NB-ARC domain protein | LC | chr3:5932433-5928136
           | 20130731
          Length = 526

 Score =  194 bits (492), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 96/108 (88%), Positives = 102/108 (94%), Gaps = 3/108 (2%)

Query: 34  QSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDILPS 93
           ++TLKRIGVN+IPAIEEVNIFKDDVVIQFL PKVQA+IAANTWVVSGSPQTKKLQDILP+
Sbjct: 407 KNTLKRIGVNSIPAIEEVNIFKDDVVIQFLYPKVQAAIAANTWVVSGSPQTKKLQDILPN 466

Query: 94  IIQQLGPDNLENLKKLAEQFQKQAPEAGA---TAQEEDDDAVPDLVPG 138
           II QLGPDNLENLKKLAEQFQKQAPEAGA    AQE+DDDAVPDLVPG
Sbjct: 467 IIHQLGPDNLENLKKLAEQFQKQAPEAGADATAAQEDDDDAVPDLVPG 514


>Medtr3g020640.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | LC | chr3:5978502-5973054 | 20130731
          Length = 1131

 Score =  176 bits (446), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 92/121 (76%), Positives = 97/121 (80%), Gaps = 10/121 (8%)

Query: 21   AVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSG 80
            AVHKT TTDDKRLQSTLKRIGVN IPA       K  + ++     VQASIAANTWVVS 
Sbjct: 1006 AVHKTATTDDKRLQSTLKRIGVNGIPA-------KVKLTVELELVAVQASIAANTWVVSS 1058

Query: 81   SPQTKKLQDILPSIIQQLGPDNLENLKKLAEQFQKQAPEAGA---TAQEEDDDAVPDLVP 137
            SPQTKKLQDILP+II QLGPDNLEN KKLAEQFQKQAPEAGA    AQE+DDDAVPDLVP
Sbjct: 1059 SPQTKKLQDILPNIIHQLGPDNLENQKKLAEQFQKQAPEAGADATAAQEDDDDAVPDLVP 1118

Query: 138  G 138
            G
Sbjct: 1119 G 1119


>Medtr3g020650.1 | disease resistance protein (TIR-NBS-LRR class),
            putative | LC | chr3:5984347-5979088 | 20130731
          Length = 1185

 Score =  136 bits (343), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 67/85 (78%), Positives = 72/85 (84%)

Query: 32   RLQSTLKRIGVNAIPAIEEVNIFKDDVVIQFLNPKVQASIAANTWVVSGSPQTKKLQDIL 91
            R Q T K    N IPAIEEVNIFKDDVVIQ+LNPKVQASIA +TWVVSGSPQTKKLQ IL
Sbjct: 1028 RRQKTSKHSEENGIPAIEEVNIFKDDVVIQYLNPKVQASIATSTWVVSGSPQTKKLQYIL 1087

Query: 92   PSIIQQLGPDNLENLKKLAEQFQKQ 116
             +II Q GPDNLE+LKKLA+QFQKQ
Sbjct: 1088 HNIIHQFGPDNLESLKKLAKQFQKQ 1112