Miyakogusa Predicted Gene

Lj0g3v0091049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0091049.1 Non Characterized Hit- tr|K4CU84|K4CU84_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,33.04,1e-18,seg,NULL; Cornifin,Cornifin (SPRR1),CUFF.4956.1
         (237 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g026330.1 | leguminosin group485 secreted peptide | HC | c...    54   2e-07
Medtr3g026290.1 | leguminosin proline-rich group669 secreted pep...    52   7e-07

>Medtr3g026330.1 | leguminosin group485 secreted peptide | HC |
          chr3:8112172-8110751 | 20130731
          Length = 344

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/40 (62%), Positives = 29/40 (72%)

Query: 1  MASISLSTIIFPFFVLTLFSANSHMMVAGARILLESSEPH 40
          MASI+LS  IFPF +L LFS N +  VAGAR LLES+ P 
Sbjct: 1  MASINLSKFIFPFMLLALFSTNGNTRVAGARNLLESNIPQ 40


>Medtr3g026290.1 | leguminosin proline-rich group669 secreted
          peptide | HC | chr3:8095999-8094532 | 20130731
          Length = 360

 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 26/40 (65%), Positives = 29/40 (72%)

Query: 1  MASISLSTIIFPFFVLTLFSANSHMMVAGARILLESSEPH 40
          MASI+LSTIIF F  L L S NS+  VAGAR LLES+ P 
Sbjct: 1  MASINLSTIIFSFMFLALLSTNSNTRVAGARNLLESNIPQ 40