Miyakogusa Predicted Gene

Lj0g3v0090789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0090789.1 tr|G7I9H7|G7I9H7_MEDTR Lon protease homolog
OS=Medicago truncatula GN=MTR_1g084020 PE=3 SV=1,78.95,0.0000000002,no
description,NULL; UNCHARACTERIZED PROTEIN YTBQ,NULL; NAD DEPENDENT
EPIMERASE/DEHYDRATASE,NULL; se,CUFF.4923.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g084020.1 | Lon-related ATP-dependent protease, putative |...    70   8e-13
Medtr5g021760.1 | GDP-mannose 4,6 dehydratase-like protein | HC ...    65   4e-11
Medtr5g021770.1 | GDP-mannose 4,6 dehydratase-like protein | HC ...    63   1e-10

>Medtr1g084020.1 | Lon-related ATP-dependent protease, putative | HC
           | chr1:37466754-37455374 | 20130731
          Length = 977

 Score = 70.1 bits (170), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/38 (78%), Positives = 37/38 (97%)

Query: 124 MKALQESQERQAPYAGAFLVKDEPDADPSVVSSSNTEK 161
           + ALQES++RQAPYAGAFL+KDEPD+DP+VVSSS+TEK
Sbjct: 126 LAALQESRDRQAPYAGAFLLKDEPDSDPNVVSSSDTEK 163


>Medtr5g021760.1 | GDP-mannose 4,6 dehydratase-like protein | HC |
           chr5:8478723-8476585 | 20130731
          Length = 369

 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 34/52 (65%), Gaps = 15/52 (28%)

Query: 20  CNGI---------------RKITRAVGRLKIGLQSKLVLGNLQASRDWGLAG 56
           CNGI               RKITRAVGR+KIGLQSKL LGNL ASRDWG AG
Sbjct: 204 CNGILFNHESPRRGENFVTRKITRAVGRIKIGLQSKLFLGNLSASRDWGFAG 255


>Medtr5g021770.1 | GDP-mannose 4,6 dehydratase-like protein | HC |
           chr5:8487302-8485020 | 20130731
          Length = 369

 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 32/52 (61%), Positives = 33/52 (63%), Gaps = 15/52 (28%)

Query: 20  CNGI---------------RKITRAVGRLKIGLQSKLVLGNLQASRDWGLAG 56
           CNGI               RKITR VGR+KIGLQSKL LGNL ASRDWG AG
Sbjct: 204 CNGILFNHESPRRGENFVTRKITRVVGRIKIGLQSKLFLGNLSASRDWGFAG 255