Miyakogusa Predicted Gene

Lj0g3v0090049.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0090049.1 Non Characterized Hit- tr|I3T6J8|I3T6J8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.62,0,coiled-coil,NULL; Shikimate_DH,Quinate/shikimate
5-dehydrogenase/glutamyl-tRNA reductase; GlutR_dime,CUFF.4872.1
         (276 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g111190.1 | glutamyl-tRNA reductase family protein | HC | ...   518   e-147
Medtr3g111190.2 | glutamyl-tRNA reductase family protein | HC | ...   515   e-146
Medtr5g067410.1 | glutamyl-tRNA reductase | HC | chr5:28478850-2...   477   e-135
Medtr4g092820.1 | glutamyl-tRNA reductase family protein | HC | ...   379   e-105

>Medtr3g111190.1 | glutamyl-tRNA reductase family protein | HC |
           chr3:51956056-51958898 | 20130731
          Length = 531

 Score =  518 bits (1333), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/277 (90%), Positives = 264/277 (95%), Gaps = 1/277 (0%)

Query: 1   MKLPGTSHD-ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRTEERVAAIREELKDVEII 59
           MKLP  SHD ARML+IGAGKMGKLVIKHLV+KGCT+MVVVNRTEERVAAIREELKD+EII
Sbjct: 255 MKLPEASHDNARMLIIGAGKMGKLVIKHLVSKGCTRMVVVNRTEERVAAIREELKDIEII 314

Query: 60  YKPLSEMLTCVGEADVVFTSTASETPLFMKDHVKDLPPASQDVGGQRIFIDISVPRNVDS 119
           YKPLSEML+CV EADVVFTSTASETPLFMKD VKDLPPASQDVGG R+FIDISVPRNV S
Sbjct: 315 YKPLSEMLSCVCEADVVFTSTASETPLFMKDDVKDLPPASQDVGGLRLFIDISVPRNVGS 374

Query: 120 CVSDLDSVRVYNVDDLKEVVAANKEDRLRKAMEAQTIIAEESKQFEAWRDSLETVPTIKK 179
           CVSD++SVRVYNVDDLKEVVAANKEDRLRKAMEAQ II EE KQFEAWRDSLETVPTIKK
Sbjct: 375 CVSDIESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEELKQFEAWRDSLETVPTIKK 434

Query: 180 LRAYAERIRVAELDKCLGKMGEDISKKMRRAVDDLSRGMVNRLLHGPMQHLRCDGSDSRT 239
           LRAYAERIRVAEL+KCLGKMG+DISKK R+AVDDLSRG+VNR+LHGPMQHLRCDGSD RT
Sbjct: 435 LRAYAERIRVAELEKCLGKMGDDISKKTRKAVDDLSRGIVNRMLHGPMQHLRCDGSDDRT 494

Query: 240 LNETLENMHALNRMFSLETEISVLEQKIRAKVEQNQK 276
           L ETLENMHALNRMFSLETEISVLEQK+RAKVEQNQK
Sbjct: 495 LTETLENMHALNRMFSLETEISVLEQKVRAKVEQNQK 531


>Medtr3g111190.2 | glutamyl-tRNA reductase family protein | HC |
           chr3:51956073-51958895 | 20130731
          Length = 435

 Score =  515 bits (1326), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/277 (90%), Positives = 264/277 (95%), Gaps = 1/277 (0%)

Query: 1   MKLPGTSHD-ARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRTEERVAAIREELKDVEII 59
           MKLP  SHD ARML+IGAGKMGKLVIKHLV+KGCT+MVVVNRTEERVAAIREELKD+EII
Sbjct: 159 MKLPEASHDNARMLIIGAGKMGKLVIKHLVSKGCTRMVVVNRTEERVAAIREELKDIEII 218

Query: 60  YKPLSEMLTCVGEADVVFTSTASETPLFMKDHVKDLPPASQDVGGQRIFIDISVPRNVDS 119
           YKPLSEML+CV EADVVFTSTASETPLFMKD VKDLPPASQDVGG R+FIDISVPRNV S
Sbjct: 219 YKPLSEMLSCVCEADVVFTSTASETPLFMKDDVKDLPPASQDVGGLRLFIDISVPRNVGS 278

Query: 120 CVSDLDSVRVYNVDDLKEVVAANKEDRLRKAMEAQTIIAEESKQFEAWRDSLETVPTIKK 179
           CVSD++SVRVYNVDDLKEVVAANKEDRLRKAMEAQ II EE KQFEAWRDSLETVPTIKK
Sbjct: 279 CVSDIESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEELKQFEAWRDSLETVPTIKK 338

Query: 180 LRAYAERIRVAELDKCLGKMGEDISKKMRRAVDDLSRGMVNRLLHGPMQHLRCDGSDSRT 239
           LRAYAERIRVAEL+KCLGKMG+DISKK R+AVDDLSRG+VNR+LHGPMQHLRCDGSD RT
Sbjct: 339 LRAYAERIRVAELEKCLGKMGDDISKKTRKAVDDLSRGIVNRMLHGPMQHLRCDGSDDRT 398

Query: 240 LNETLENMHALNRMFSLETEISVLEQKIRAKVEQNQK 276
           L ETLENMHALNRMFSLETEISVLEQK+RAKVEQNQK
Sbjct: 399 LTETLENMHALNRMFSLETEISVLEQKVRAKVEQNQK 435


>Medtr5g067410.1 | glutamyl-tRNA reductase | HC |
           chr5:28478850-28475926 | 20130731
          Length = 542

 Score =  477 bits (1228), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 231/275 (84%), Positives = 256/275 (93%), Gaps = 2/275 (0%)

Query: 1   MKLPG-TSH-DARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRTEERVAAIREELKDVEI 58
           MKLP   SH +ARMLVIGAGKMGKLVIKHLVAKGC KMVVVNRTE RVAAIREE+ DVEI
Sbjct: 265 MKLPDQASHGNARMLVIGAGKMGKLVIKHLVAKGCKKMVVVNRTEGRVAAIREEINDVEI 324

Query: 59  IYKPLSEMLTCVGEADVVFTSTASETPLFMKDHVKDLPPASQDVGGQRIFIDISVPRNVD 118
           IYKPLSEML C+GEADVVFTSTASE PL  K +VK+LP AS+++GG+R+F+DISVPRNV 
Sbjct: 325 IYKPLSEMLECIGEADVVFTSTASENPLIFKQNVKELPLASEEMGGKRLFVDISVPRNVG 384

Query: 119 SCVSDLDSVRVYNVDDLKEVVAANKEDRLRKAMEAQTIIAEESKQFEAWRDSLETVPTIK 178
           SCV DL+SV+VYNVDDLKEVVAANKEDRLRKAMEAQ II EES QFEAWRDSLETVPTIK
Sbjct: 385 SCVDDLESVKVYNVDDLKEVVAANKEDRLRKAMEAQVIIGEESGQFEAWRDSLETVPTIK 444

Query: 179 KLRAYAERIRVAELDKCLGKMGEDISKKMRRAVDDLSRGMVNRLLHGPMQHLRCDGSDSR 238
           KLRAYAER+RVAEL+KCLGKMG+DI+KK ++AVDDLS+G+VN++LHGPMQHLRCDGSDSR
Sbjct: 445 KLRAYAERLRVAELEKCLGKMGDDINKKTQKAVDDLSKGIVNKMLHGPMQHLRCDGSDSR 504

Query: 239 TLNETLENMHALNRMFSLETEISVLEQKIRAKVEQ 273
           TL+ETLENMHALNRMFSLETE+SVLEQKIRAKVEQ
Sbjct: 505 TLSETLENMHALNRMFSLETEVSVLEQKIRAKVEQ 539


>Medtr4g092820.1 | glutamyl-tRNA reductase family protein | HC |
           chr4:36827280-36829890 | 20130731
          Length = 529

 Score =  379 bits (973), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 184/275 (66%), Positives = 229/275 (83%), Gaps = 1/275 (0%)

Query: 2   KLPGTSHDARMLVIGAGKMGKLVIKHLVAKGCTKMVVVNRTEERVAAIREELKDVEIIYK 61
           +L  +  DA++LVIGAGKMGKLVIKHLVAKGC KMVVVNR+EE+V AIR+ELKDV+I+Y+
Sbjct: 256 RLESSFGDAKVLVIGAGKMGKLVIKHLVAKGCRKMVVVNRSEEKVNAIRKELKDVDIVYR 315

Query: 62  PLSEMLTCVGEADVVFTSTASETPLFMKDHVKDLPPASQDVGGQRIFIDISVPRNVDSCV 121
           PLSEM+ C  EADV+FT TASE+ LF K++V+ LPP  Q V  +R+F+DIS+PRNVD  V
Sbjct: 316 PLSEMMECAAEADVIFTGTASESLLFSKENVEILPPVGQGVR-RRLFVDISIPRNVDPGV 374

Query: 122 SDLDSVRVYNVDDLKEVVAANKEDRLRKAMEAQTIIAEESKQFEAWRDSLETVPTIKKLR 181
           S+L++  VYNVDDL+EVV ANKEDR RKAMEA+ II EE   FEAW+DSLETVPTIKK R
Sbjct: 375 SELENALVYNVDDLREVVDANKEDRQRKAMEARGIIKEELNTFEAWKDSLETVPTIKKFR 434

Query: 182 AYAERIRVAELDKCLGKMGEDISKKMRRAVDDLSRGMVNRLLHGPMQHLRCDGSDSRTLN 241
           AY ERIR +EL+KCL KM  D+SK+ + A+  LS G+VN+LLHGPMQHLRCDG+D++ L+
Sbjct: 435 AYVERIRASELEKCLSKMRGDVSKEQKEAMYALSMGIVNKLLHGPMQHLRCDGNDTKCLD 494

Query: 242 ETLENMHALNRMFSLETEISVLEQKIRAKVEQNQK 276
           E LENM ALNRM+ LETEIS++E+KIR K+E+ +K
Sbjct: 495 EVLENMRALNRMYDLETEISLMEEKIRVKMEKAKK 529