Miyakogusa Predicted Gene

Lj0g3v0089779.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0089779.1 Non Characterized Hit- tr|I1LXQ3|I1LXQ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.43146
PE,66.76,0,BRCA2_REPEAT,BRCA2 repeat; Nucleic acid-binding
proteins,Nucleic acid-binding, OB-fold-like; BRCA2 h,CUFF.4845.1
         (1065 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g083250.1 | breast cancer type 2 susceptibility protein | ...  1377   0.0  
Medtr0191s0030.1 | breast cancer type 2 susceptibility protein |...   988   0.0  
Medtr6g033115.1 | breast cancer type 2 susceptibility-like prote...   903   0.0  

>Medtr3g083250.1 | breast cancer type 2 susceptibility protein | HC |
            chr3:37568957-37576662 | 20130731
          Length = 1254

 Score = 1377 bits (3564), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 710/1014 (70%), Positives = 802/1014 (79%), Gaps = 41/1014 (4%)

Query: 75   NSLFKTGSGKRVTISSTGLVRAKTLLGL--KEDAVGSTVLSPQHRIG-EAHDGKXXXXXX 131
            NSLFKTGSG++VTISS GLVRAKTLLGL   E+ VG+ + +PQ+     A D +      
Sbjct: 257  NSLFKTGSGRKVTISSKGLVRAKTLLGLGLHEETVGANIQTPQNAEKLHAFDEELPHVQ- 315

Query: 132  XXXXXXHGVKESCKIMSAVPFQSPLVSGRGSSTLENGFE-----PDTCGAAVKPAPIKFQ 186
                    + +SCK+MS+  FQSPLV GR    L+NGFE     PD+ G A K APIKFQ
Sbjct: 316  --------LMDSCKMMSSASFQSPLV-GR----LKNGFESKFVQPDSGGGA-KQAPIKFQ 361

Query: 187  TAGGRSLSISNDALRRARXXXXXXXXXXXXXXXXXXXXXXXXPDTRQ-TNAASPCERSAF 245
            TA GRSLSIS DAL+RAR                          T   T++A   E    
Sbjct: 362  TASGRSLSISGDALKRARRLLGDPDLGDFFDGGDSLFSFLDQGQTSTITSSAERSESKNT 421

Query: 246  STPLIHHVTSGN--NDKMKSFTYPLQSSRQQTEFSTKFLCEGNGDNLIMKFDAVGNEKVS 303
             TPL+H +T  N  N   KSFTYPLQ S+Q  EFS K   EGNG+NLI+KFD V NE   
Sbjct: 422  HTPLVHQMTPENHPNHMSKSFTYPLQPSKQM-EFSNKLRNEGNGNNLIVKFDDVVNESDC 480

Query: 304  SRKSSNVGGKKPLHDRNERADQAAYHSSLTGFSSKIDSCGVPVGGRPLVDISNTINTAHP 363
              KSS   G+KPL+++NE AD     SSL GFSS++DS   P+G R LVDISNTI T H 
Sbjct: 481  GCKSSITPGQKPLYNKNEVADTTIKSSSLNGFSSRMDSREKPLG-RALVDISNTIKTVHT 539

Query: 364  NNRLPASGKRRLGLRVIASPFKKPRNSQVFAD--QEVENFPN-----ASGASECKKKVST 416
            N++ PASGKRR+GL    S FKKPR S + A   Q+V+ F N     +SGAS  K+KVST
Sbjct: 540  NHKQPASGKRRIGLHATVSSFKKPRISNISASGGQDVQYFSNDLAQLSSGASGFKRKVST 599

Query: 417  RYPFQYPRMHIKDYFAVPPLQQEV-----HFPNPVGQVTSGNAEKYMFCDGSGNNGMGAE 471
            RYPF +PRM+IKDYFAVPPL+Q+V     +FPNP  QVTS NA  Y+F DGS +N MGAE
Sbjct: 600  RYPFHHPRMYIKDYFAVPPLEQKVVSVISNFPNPARQVTSCNAGAYIFHDGSDSNDMGAE 659

Query: 472  AFVNLLAQHGTSLHFASKEWVLNHYKWIVWKLACYERCNPAKHAGKFLTVSNVLEELKYR 531
            AF++LL QHG SL FASKEWVLNHYKWIVWKLACYERC PA+ AGKFLTVSNVLEELKYR
Sbjct: 660  AFIHLLTQHGASLRFASKEWVLNHYKWIVWKLACYERCYPARCAGKFLTVSNVLEELKYR 719

Query: 532  YEREVNHGHRSTIKKILEGDALPSAMMILCISRIHSDHVPESGSLFETRTGDQRKETVEI 591
            YEREVNHGHRSTIKKILEGD LPS+MM LCIS IHSDHV +SG+L E +TG+Q  E +++
Sbjct: 720  YEREVNHGHRSTIKKILEGDGLPSSMMTLCISSIHSDHVLDSGALSEPQTGNQSNEALKV 779

Query: 592  ELTDGWYSINAILDIPLSKQRAAGRLFVGQKLRIWGAGLCGWNEPVSPLEVSSTVRLSLH 651
            ELTDGWYSINAILD+PLSKQ AAGRLFVGQKLRIWGAGLCGWN PVSPLEVSSTV L LH
Sbjct: 780  ELTDGWYSINAILDVPLSKQLAAGRLFVGQKLRIWGAGLCGWNGPVSPLEVSSTVSLLLH 839

Query: 652  INGTYRAHWAERLGFCKVAGPPLAFRCIKSNGGLIPQTLAGITRIYPILYKERLSSGRSV 711
            INGTYRAHWA+RLG CKVAGPPLAF+CIK NGGL+PQTLAGITRIYPILYKERLSSGRSV
Sbjct: 840  INGTYRAHWADRLGLCKVAGPPLAFKCIKRNGGLVPQTLAGITRIYPILYKERLSSGRSV 899

Query: 712  VISERMENKMMELYNQRRSAVIDSIVSEHQKERRGSHIYDDSESEGAKIYKMLETAEEPE 771
            VISERMENKMMEL+NQRRSAV+D+IVSE+QKE  GSHIYD   SEGAKIYKMLETA EPE
Sbjct: 900  VISERMENKMMELHNQRRSAVVDNIVSEYQKEMTGSHIYDYGNSEGAKIYKMLETAAEPE 959

Query: 772  FLMADMSPEQLSSFSAYKAKLNAIRQSKMENSIEKSLQDAGLRHREVTQFMRLRIVGLTY 831
            FLMADM+PEQLSSF+AYKAKLNA RQS+ME+SIEK+L+D+GL  REVT FMRLR+VGLTY
Sbjct: 960  FLMADMTPEQLSSFAAYKAKLNANRQSQMESSIEKALKDSGLGDREVTPFMRLRVVGLTY 1019

Query: 832  KNGQDKPKEGIVTIWNPTEKQRQELIEGEAYVISGLIPSGSDLDNLQLQTKGSSTKWLPL 891
            KN +DKP EGIVTIWNPT+KQRQEL EGEAY I+ LIPSGSD D L LQT+GS+TKWLPL
Sbjct: 1020 KNQRDKPTEGIVTIWNPTQKQRQELSEGEAYAIAELIPSGSDSDVLHLQTRGSTTKWLPL 1079

Query: 892  SSNSREQFKPFFSNRQSIPLSSLTDIPLSNEFDVAAYVVHVGEVYQSSQQKKQWIFVSDG 951
            SSN++EQFKPF +NR SIPLSSL+DIPLSNEFDV A+VVHVG+VY SSQQKKQW+FV+DG
Sbjct: 1080 SSNAKEQFKPFSNNRNSIPLSSLSDIPLSNEFDVVAFVVHVGKVYTSSQQKKQWVFVTDG 1139

Query: 952  S-MYGLQSEKLTNTLLAICFCSPLIDHDSFPPINYNLAGSTVGFCNLIKKEKDHTNHVWV 1010
            S M GLQS+K+T+TLLAICFCSPL DHDSFPPIN+NLAGSTVGFCNLIKKEKDHTNH+WV
Sbjct: 1140 SIMNGLQSQKVTDTLLAICFCSPLFDHDSFPPINHNLAGSTVGFCNLIKKEKDHTNHIWV 1199

Query: 1011 ADATESSTYYLNFDSPYCSHLRNAASSVRAWASNSSLTIEKLKEKVLLMIGDSR 1064
            ADA E STYYL FDSP CSHLRNAASSVR WASNSSL IEKLKEKVL ++GD +
Sbjct: 1200 ADANEISTYYLKFDSPQCSHLRNAASSVRRWASNSSLIIEKLKEKVLGIVGDCK 1253



 Score =  115 bits (288), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 102/203 (50%), Gaps = 34/203 (16%)

Query: 1   MSTWKIFSDAGTNFRWQISKDAASNVXXXXXXXXXXXXX---XXXXXXXXXXTLQLFTHQ 57
           MS+W+I  DA  N+RWQI+ D  SNV                             LF  Q
Sbjct: 1   MSSWQILPDADNNYRWQINSDDTSNVIPPSPPPFSIPTPPLPSMYDLLIHASASHLFQPQ 60

Query: 58  GEQELGIGDNSSSCGFGNSLFKTGSGKRVTISSTGLVRAKTL--LGLKEDAVGSTVLSPQ 115
            E+E  I D   S GF NSLFKTGSG++VTISS GLVRAKTL  LGL E+ VG+ + +PQ
Sbjct: 61  -EEENAIDD---SFGFANSLFKTGSGRKVTISSKGLVRAKTLLGLGLHEETVGANIQTPQ 116

Query: 116 H--RIGEAHDGKXXXXXXXXXXXXHGVKESCKIMSAVPFQSPLVSGRGSSTLENGFE--- 170
           +  +    H  +              V +SCK  SA  FQSPLV     S L+NGFE   
Sbjct: 117 NAKKFNSFHQDEPRLQ----------VIDSCKKTSAASFQSPLV-----SRLKNGFENKI 161

Query: 171 --PDT---CGAAVKPAPIKFQTA 188
             PDT    G   K APIKFQT 
Sbjct: 162 VQPDTGSRSGVGAKQAPIKFQTG 184


>Medtr0191s0030.1 | breast cancer type 2 susceptibility protein | HC
           | scaffold0191:30338-23519 | 20130731
          Length = 808

 Score =  988 bits (2553), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/860 (61%), Positives = 616/860 (71%), Gaps = 72/860 (8%)

Query: 70  SCGFGNSLFKTGSGKRVTISSTGLVRAKTLLGL--KEDAVGSTVLSPQHRIGEAHDGKXX 127
           S GF NSLFKT SG++VT+SS GLVRAKTLLGL  +E+ + S   +P++           
Sbjct: 2   SFGFSNSLFKTASGRKVTLSSNGLVRAKTLLGLGLQEEIIDSNNHTPKN----------- 50

Query: 128 XXXXXXXXXXHGVKESCKIM---SAVPFQSPLV---SGRGSSTLENGFE-PDTCGAAVKP 180
                     HG  E    +   S   F++ +V   SG GS      F+ P    +  K 
Sbjct: 51  ------AKNFHGFDEESPPLVSKSKNGFENKIVQIESGSGSKKAPIKFQTPQNSDSGAKQ 104

Query: 181 APIKFQTAGGRSLSISNDALRRARXXXXXXXXXXXXXXXXXXXXXXXXPDTRQTNAASPC 240
           A  KFQTA GRSLSIS+DAL+RAR                         D RQ       
Sbjct: 105 AQFKFQTAAGRSLSISSDALKRARSLLGDPDLGDFFEGEDSLFLSL---DMRQI------ 155

Query: 241 ERSAFSTPLIHHVT--SGNNDKMKSFTYPLQSSRQQTEFSTKFLC-EGNGDNLIMKFDAV 297
             S  ++ + H  T  S  N   KSFTYPLQ S+Q TEFS K L  EGNG+NLIMKFD V
Sbjct: 156 --SKITSSVGHQKTPESNKNHVTKSFTYPLQPSKQ-TEFSNKLLGHEGNGNNLIMKFDDV 212

Query: 298 GNEKVSSRKSSNVGGKKPLHDRNERADQAAYHSSLTGFSSKIDSCGVPVGGRPLVDISNT 357
            NE     KSSN           E  D     SSL               G    D+S+T
Sbjct: 213 ANESDYGCKSSNT---------LEVVDLTRKSSSL---------------GTTFFDVSST 248

Query: 358 INTAHPNNRLPASGKRRLGLRVIASPFKKPRNSQVFA--DQEVENFPN-----ASGASEC 410
             T    N+ PA GKRRLGL    S FKKPR S+  A  DQ V+NF N     +SGAS C
Sbjct: 249 TKTTPTFNKQPAIGKRRLGLTANVSSFKKPRISKTSASGDQHVQNFHNGLSKLSSGASGC 308

Query: 411 KKKVSTRYPFQYPRMHIKDYFAVPPLQQEVHFPNPVGQVTSGNAEKYMFCDGSGNNGMGA 470
           K+KVSTRYP +  R+HIK++FAVPPL ++VHFPNPV QVTSGNA +Y+F DGS +NG+G 
Sbjct: 309 KRKVSTRYPSRNARIHIKEFFAVPPLMKKVHFPNPVRQVTSGNAGEYIFHDGSDDNGIGG 368

Query: 471 EAFVNLLAQHGTSLHFASKEWVLNHYKWIVWKLACYERCNPAKHAGKFLTVSNVLEELKY 530
           EAF++LLAQHG SLHFASKEWVLNHYKWIVWKLACYER  PA+ AGKFLTVSNVLEELKY
Sbjct: 369 EAFIHLLAQHGASLHFASKEWVLNHYKWIVWKLACYERYYPARCAGKFLTVSNVLEELKY 428

Query: 531 RYEREVNHGHRSTIKKILEGDALPSAMMILCISRIHSDHVPESGSLFETRTGDQRKETVE 590
           RYEREVNHGHRS IKK+LEGD LPS+MMILCIS IHS+HV ESG+LF+ +TG++ +E V+
Sbjct: 429 RYEREVNHGHRSIIKKVLEGDILPSSMMILCISSIHSNHVMESGTLFQAQTGNKSREAVK 488

Query: 591 IELTDGWYSINAILDIPLSKQRAAGRLFVGQKLRIWGAGLCGWNEPVSPLEVSSTVRLSL 650
           +ELTDGWYSINAILD PLSKQ  AGRLFVGQKLRIWGA LCGWN PVSP EVSST+ L L
Sbjct: 489 VELTDGWYSINAILDAPLSKQLDAGRLFVGQKLRIWGAELCGWNGPVSPFEVSSTISLFL 548

Query: 651 HINGTYRAHWAERLGFCKVAGPPLAFRCIKSNGGLIPQTLAGITRIYPILYKERLSSGRS 710
           HINGTYR HW+ RLGFCKVAGPPLAF+CIK+NGGLIPQTLAGIT IYPILYKERLSS RS
Sbjct: 549 HINGTYRVHWSARLGFCKVAGPPLAFKCIKNNGGLIPQTLAGITLIYPILYKERLSSERS 608

Query: 711 VVISERMENKMMELYNQRRSAVIDSIVSEHQKERRGSHIYDDSESEGAKIYKMLETAEEP 770
           VV+SERMENKMMEL+NQR SAV+D+IVSE+QKER  SH+YD  +SEGAKIY MLETA EP
Sbjct: 609 VVLSERMENKMMELHNQRCSAVVDNIVSEYQKERTSSHVYDHDDSEGAKIYMMLETAAEP 668

Query: 771 EFLMADMSPEQLSSFSAYKAKLNAIRQSKMENSIEKSLQDAGLRHREVTQFMRLRIVGLT 830
           EFLMADM+ EQL SF+AYKAKLNA RQS++E+SIEK+L+D+GL +R+VT FM+LR+VGLT
Sbjct: 669 EFLMADMTLEQLRSFAAYKAKLNATRQSQLESSIEKALKDSGLGNRDVTPFMKLRVVGLT 728

Query: 831 YKNGQDKPKEGIVTIWNPTEKQRQELIEGEAYVISGLIPSGSDLDNLQLQTKGSSTKWLP 890
           YKN QDKPKEGI+TIWNPT+KQ QEL EGEAY I+GL P GSD D L LQT+GS+TKWLP
Sbjct: 729 YKNRQDKPKEGIITIWNPTQKQCQELAEGEAYAIAGLTPYGSDPDVLHLQTRGSTTKWLP 788

Query: 891 LSSNSREQFKPFFSNRQSIP 910
           LSSN++EQF+ FF++R+SIP
Sbjct: 789 LSSNAKEQFRSFFNSRKSIP 808


>Medtr6g033115.1 | breast cancer type 2 susceptibility-like protein |
            HC | chr6:10433073-10439288 | 20130731
          Length = 614

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/630 (70%), Positives = 511/630 (81%), Gaps = 44/630 (6%)

Query: 404  ASGASECKKKVSTRYPFQYPRMHIKDYFAVPPLQQEVHFPNPVGQVTSGNAEKYMFCDGS 463
            +SGAS CK+KVSTRYP ++ R+HIK++FAVPPL+++VHFPNPV QVTSGNA +Y+F DGS
Sbjct: 11   SSGASGCKRKVSTRYPSRHARIHIKEFFAVPPLKKKVHFPNPVRQVTSGNAGEYIFHDGS 70

Query: 464  GNNGMGAEAFVNLLAQHGTSLHFASKEWVLNHYKWIVWKLACYERCNPAKHAGKFLTVSN 523
             +NG+G EAF++LLAQHG SLH             + + LA   RC     AGKFLTVSN
Sbjct: 71   DDNGIGGEAFIHLLAQHGASLHL------------VAFILA---RC-----AGKFLTVSN 110

Query: 524  VLEELKYRYEREVNHGHRSTIKKILE-GDALPSAMMILCISRIHSDHVPESGSLFETRTG 582
            VLEELKYRYEREVNHGHRS IKK+LE GD LPS+MMILCIS IHS+HV ESG+LF+ +TG
Sbjct: 111  VLEELKYRYEREVNHGHRSIIKKVLEEGDILPSSMMILCISSIHSNHVMESGTLFQAQTG 170

Query: 583  DQRKETVEIELTDGWYSINAILDIPLSKQRAAGRLFVGQKLRIWGAGLCGWNEPVSPLEV 642
            ++ +E V++ELTDGWYSINAILD PLSKQ  AGRLFVGQKLRIWGA LCGWN PVSP EV
Sbjct: 171  NKSREAVKVELTDGWYSINAILDAPLSKQLDAGRLFVGQKLRIWGAELCGWNGPVSPFEV 230

Query: 643  SSTVRLSLHINGTYRAHWAERLGFCKVAGPPLAFRCIKSNGGLIPQTLAGITRIYPILYK 702
            SST+ L LHINGTYR HW+ RLGFCKVAGPPLAF+CIK+NGGLIPQTLAGIT IYPILYK
Sbjct: 231  SSTISLFLHINGTYRVHWSARLGFCKVAGPPLAFKCIKNNGGLIPQTLAGITHIYPILYK 290

Query: 703  ERLSSGRSVVISERMENKMMELYNQRRSAVIDSIVSEHQKERRGSHIYDDSESEGAKIYK 762
            ERLSS RSVV+SERMENKMMEL+NQRRSAV+D+IVSE+QKER  SH+YD  +SEGAKIY 
Sbjct: 291  ERLSSERSVVLSERMENKMMELHNQRRSAVVDNIVSEYQKERTSSHVYDHDDSEGAKIYM 350

Query: 763  MLETAEEPEFLMADMSPEQLSSFSAYKAKLNAIRQSKMENSIEKSLQDAGLRHREVTQFM 822
            MLETA EPEFLMADM+PEQL SF+AYKAKLNA RQS+ME+SIEK+L+D+GL +R+VT FM
Sbjct: 351  MLETAAEPEFLMADMTPEQLRSFAAYKAKLNATRQSQMESSIEKALKDSGLGNRDVTPFM 410

Query: 823  RLRIVGLTYKNGQDKPKEGIVTIWNPTEKQRQELIEGEAYVISGLIPSGSDLDNLQLQTK 882
            RLR+VGLTYKN QDK KEGIVTIWNPT+KQ QEL EGEAY I+GL P GSD D L+ QT+
Sbjct: 411  RLRVVGLTYKNCQDKSKEGIVTIWNPTQKQCQELAEGEAYAIAGLTPYGSDSDVLRFQTR 470

Query: 883  GSSTKWLPLSSNSREQFKPF--FSNRQSIPLSSLTDIPLSNEFDVAAYVVHVGEVYQSSQ 940
            GS+TKWLPLSSN+R     F    N+    +   +  P                    SQ
Sbjct: 471  GSTTKWLPLSSNARNSLVHFSIVGNQSHCQVCVTSLFP--------------------SQ 510

Query: 941  QKKQWIFVSDGS-MYGLQSEKLTNTLLAICFCSPLIDHDSFPPINYNLAGSTVGFCNLIK 999
            QKKQW+FV+DGS M GLQSEK T+TLLAI FCSPLIDHDSFPPIN+NLAGSTVGFCNLIK
Sbjct: 511  QKKQWVFVTDGSIMKGLQSEKFTDTLLAIFFCSPLIDHDSFPPINHNLAGSTVGFCNLIK 570

Query: 1000 KEKDHTNHVWVADATESSTYYLNFDSPYCS 1029
            KEKDHT  +WVADA E+STYYL FDS +CS
Sbjct: 571  KEKDHTYQIWVADANENSTYYLKFDSSHCS 600