Miyakogusa Predicted Gene

Lj0g3v0089039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0089039.1 tr|G7IK16|G7IK16_MEDTR Kinesin-like protein
OS=Medicago truncatula GN=MTR_2g010760 PE=3
SV=1,78.38,0.0000001,coiled-coil,NULL; seg,NULL,CUFF.4783.1
         (78 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010760.1 | kinesin motor catalytic domain protein | HC | ...    58   2e-09

>Medtr2g010760.1 | kinesin motor catalytic domain protein | HC |
           chr2:2516525-2509682 | 20130731
          Length = 785

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/37 (78%), Positives = 31/37 (83%)

Query: 41  ENEMKMKMGELNEVISNLRMMISSLEERITKEERDKL 77
           ENEM MK+ ELNE ISNLRM ISSLEE+I KEE DKL
Sbjct: 142 ENEMNMKIAELNEAISNLRMTISSLEEKIAKEESDKL 178