Miyakogusa Predicted Gene
- Lj0g3v0088649.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0088649.1 Non Characterized Hit- tr|G7INR8|G7INR8_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,78.08,0,T-COMPLEX 11-RELATED,NULL; TESTIS-SPECIFIC PROTEIN
PBS13 (T-COMPLEX 11 ),T-complex 11; seg,NULL;
coi,NODE_60673_length_1079_cov_139.521774.path3.1
(279 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g006520.2 | T-complex protein | HC | chr2:595694-589033 | ... 326 1e-89
Medtr2g006520.1 | T-complex protein | HC | chr2:595681-588914 | ... 326 2e-89
>Medtr2g006520.2 | T-complex protein | HC | chr2:595694-589033 |
20130731
Length = 985
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/295 (66%), Positives = 214/295 (72%), Gaps = 19/295 (6%)
Query: 1 MAAGVELPEGRAAGIVMEFPVGDEESLSSPPRVPKRLRQRLLETECKSPSSVEEIEAKLR 60
MAAGVELPEG+ GIVMEFP+GD+ESLSSP R+PKRLR+RLL+TECKSPSSVEEIE KLR
Sbjct: 1 MAAGVELPEGKN-GIVMEFPIGDDESLSSPVRLPKRLRRRLLDTECKSPSSVEEIEEKLR 59
Query: 61 DAHLRRQKHYEELXXXXXXXXXXXXXXXXXXXXXXXXXXLEAKLQAAEQKRLSILTKXXX 120
A +RRQK+YE+L LEAKLQAAEQKRLS+LTK
Sbjct: 60 HAEIRRQKYYEKLSSKARAKPRSPSRCSSQDEDLGQR--LEAKLQAAEQKRLSLLTKAQM 117
Query: 121 XXXXXXXXXXXXKNGVEMRHENE----------------PNRMLILKAHRQRRASLRERA 164
KNGVE+RH NE NRMLILKA RQRRASLRER+
Sbjct: 118 RLARQDQLRQAAKNGVELRHANERVKLGTKVESRVQQAEANRMLILKARRQRRASLRERS 177
Query: 165 SQSLMRRMAREIKYKECVRAAIHQKRVAAETKRLGLLEAEKKKARARVLQVRHVAKSVTH 224
SQSLMRRM RE KYKE VRAAIHQKR AAE+KRL LLEAEKK+ A+VLQ RHVAKSV+H
Sbjct: 178 SQSLMRRMTRESKYKERVRAAIHQKRAAAESKRLQLLEAEKKRVHAKVLQARHVAKSVSH 237
Query: 225 QREIERRKKKDELEDRLQRAKRQRAEYLRHRGRLSAYAQENWIRMPKQAEYLYKK 279
QREIERRKKKDELEDRLQRAKRQRAEY+R RGRL YA ENWI M KQAEYL +K
Sbjct: 238 QREIERRKKKDELEDRLQRAKRQRAEYIRQRGRLRGYAFENWITMSKQAEYLSRK 292
>Medtr2g006520.1 | T-complex protein | HC | chr2:595681-588914 |
20130731
Length = 1179
Score = 326 bits (835), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/295 (66%), Positives = 214/295 (72%), Gaps = 19/295 (6%)
Query: 1 MAAGVELPEGRAAGIVMEFPVGDEESLSSPPRVPKRLRQRLLETECKSPSSVEEIEAKLR 60
MAAGVELPEG+ GIVMEFP+GD+ESLSSP R+PKRLR+RLL+TECKSPSSVEEIE KLR
Sbjct: 1 MAAGVELPEGKN-GIVMEFPIGDDESLSSPVRLPKRLRRRLLDTECKSPSSVEEIEEKLR 59
Query: 61 DAHLRRQKHYEELXXXXXXXXXXXXXXXXXXXXXXXXXXLEAKLQAAEQKRLSILTKXXX 120
A +RRQK+YE+L LEAKLQAAEQKRLS+LTK
Sbjct: 60 HAEIRRQKYYEKLSSKARAKPRSPSRCSSQDEDLGQR--LEAKLQAAEQKRLSLLTKAQM 117
Query: 121 XXXXXXXXXXXXKNGVEMRHENE----------------PNRMLILKAHRQRRASLRERA 164
KNGVE+RH NE NRMLILKA RQRRASLRER+
Sbjct: 118 RLARQDQLRQAAKNGVELRHANERVKLGTKVESRVQQAEANRMLILKARRQRRASLRERS 177
Query: 165 SQSLMRRMAREIKYKECVRAAIHQKRVAAETKRLGLLEAEKKKARARVLQVRHVAKSVTH 224
SQSLMRRM RE KYKE VRAAIHQKR AAE+KRL LLEAEKK+ A+VLQ RHVAKSV+H
Sbjct: 178 SQSLMRRMTRESKYKERVRAAIHQKRAAAESKRLQLLEAEKKRVHAKVLQARHVAKSVSH 237
Query: 225 QREIERRKKKDELEDRLQRAKRQRAEYLRHRGRLSAYAQENWIRMPKQAEYLYKK 279
QREIERRKKKDELEDRLQRAKRQRAEY+R RGRL YA ENWI M KQAEYL +K
Sbjct: 238 QREIERRKKKDELEDRLQRAKRQRAEYIRQRGRLRGYAFENWITMSKQAEYLSRK 292