Miyakogusa Predicted Gene
- Lj0g3v0088619.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0088619.1 tr|G7LDT6|G7LDT6_MEDTR Replication factor A
protein OS=Medicago truncatula GN=MTR_8g062030 PE=4
SV=1,32.97,1e-17,Nucleic acid-binding proteins,Nucleic acid-binding,
OB-fold-like; Rep_fac-A_C,Replication factor A, ,gene.g6654.t1.1
(725 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p... 107 4e-23
Medtr8g062030.1 | replication factor-A carboxy-terminal domain p... 97 5e-20
Medtr6g051890.1 | replication factor-A carboxy-terminal domain p... 88 4e-17
Medtr0032s0020.1 | PIF1-like helicase | LC | scaffold0032:18195-... 82 2e-15
Medtr4g046077.1 | replication factor-A carboxy-terminal domain p... 82 2e-15
Medtr1g075850.1 | replication factor-A carboxy-terminal domain p... 81 4e-15
Medtr8g062060.1 | DUF223 domain protein | LC | chr8:25911934-259... 77 7e-14
Medtr3g081610.1 | transmembrane protein, putative | LC | chr3:36... 77 8e-14
Medtr8g059025.1 | animal RPA1 domain protein | LC | chr8:2054987... 74 6e-13
Medtr3g056270.1 | replication factor-A carboxy-terminal domain p... 74 7e-13
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p... 73 8e-13
Medtr4g036240.2 | replication factor-A carboxy-terminal domain p... 73 1e-12
Medtr4g036240.3 | replication factor-A carboxy-terminal domain p... 72 1e-12
Medtr4g040040.1 | replication factor-A carboxy-terminal domain p... 66 1e-10
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p... 66 1e-10
Medtr6g445520.1 | replication factor-A carboxy-terminal domain p... 65 2e-10
Medtr1g050500.1 | replication factor-A carboxy-terminal domain p... 62 1e-09
Medtr7g051400.1 | replication factor-A carboxy-terminal domain p... 62 2e-09
Medtr1g105785.1 | replication factor-A carboxy-terminal domain p... 62 3e-09
Medtr4g032585.1 | replication factor-A carboxy-terminal domain p... 61 5e-09
Medtr4g032565.1 | replication factor-A carboxy-terminal domain p... 60 6e-09
Medtr7g110100.1 | replication factor-A carboxy-terminal domain p... 60 8e-09
Medtr0042s0170.1 | replication factor-A carboxy-terminal domain ... 58 3e-08
Medtr5g057125.1 | replication factor-A carboxy-terminal domain p... 58 3e-08
Medtr2g008650.1 | replication factor-A carboxy-terminal domain p... 57 6e-08
Medtr8g479260.1 | replication factor-A carboxy-terminal domain p... 57 6e-08
Medtr8g467450.1 | animal RPA1 domain protein | LC | chr8:2424111... 57 7e-08
Medtr4g134870.1 | AP2 domain class transcription factor | LC | c... 57 8e-08
Medtr3g095950.1 | animal RPA1 domain protein | HC | chr3:4384560... 52 1e-06
Medtr7g089660.1 | animal RPA1 domain protein | LC | chr7:3511416... 52 2e-06
Medtr3g116750.1 | animal RPA1 domain protein | HC | chr3:5461096... 52 2e-06
Medtr8g463820.1 | animal RPA1 domain protein | LC | chr8:2251463... 51 5e-06
Medtr8g088810.1 | DUF223 domain protein | LC | chr8:36895897-368... 50 6e-06
Medtr8g096680.1 | animal RPA1 domain protein | HC | chr8:4055821... 50 8e-06
Medtr1g036740.1 | animal RPA1 domain protein | HC | chr1:1349734... 50 8e-06
>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:33436158-33438920 | 20130731
Length = 517
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 26/276 (9%)
Query: 133 LPVEYLPKLD--KNVDIHVDMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKE 190
+ V +P++ V + D L PKKT+ QL + E+ G+FVV+A I GL+
Sbjct: 247 MDVSSVPRIGARSKVSLEEDFLRTFPKKTLEQLHSTFED------GVFVVYATIGGLVDH 300
Query: 191 CEWSYPSCRCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEAR 250
+W YP+C+C+ + + + C C + + + + R+ K+ V D + VFV+ D + +
Sbjct: 301 EDWWYPACKCHRSVSADSGAFYCKGCAKHVFQMVPRFRVKVNVSDATNVGVFVVFDGDMQ 360
Query: 251 ELINIPCEEVMNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICD 310
L+N PC +++ +A+ G YP E KL GK++LFKV + + V R+CD
Sbjct: 361 NLLNTPCSSLVSVAKAENAGHYPPEFE-KLKGKKMLFKVEKCTSSSIFFDGSFRVKRVCD 419
Query: 311 DSEIIKMFKTEKLFITPVKDKFVPPFIK----LEDAHENSKAGEKHVSNLICNGAAAGKH 366
D II+ F TP K+ F K L+D ++ C+ A A
Sbjct: 420 DPAIIQSFHFVGGQCTPSKE-FTADLPKDVYHLDDEDVVVRSFVHAAFGEGCSRAVASAG 478
Query: 367 NLRLKSSAIGCQISTAAIGHRSLKRKQKGEFDAVHS 402
++S+++G +KRK +G F + S
Sbjct: 479 ESDMRSTSVG------------VKRKLEGTFVEIDS 502
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 9 YDNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--H 66
+ +VS+I+ WK++ RVL +W VP + P +S++MVLID K AS+ K +
Sbjct: 5 FHSVSEIALGEDGWKIKVRVLRLWEVPSFLKPDQTNSLEMVLIDEMGTKIHASVRKQLFY 64
Query: 67 PFCPKIVEGQVYKISFFSIVDNIGA 91
F K+ EG+VY++S FS+ ++G+
Sbjct: 65 VFQSKLSEGKVYEMSCFSVAPSVGS 89
>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:25901653-25904109 | 20130731
Length = 575
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 87/185 (47%), Gaps = 17/185 (9%)
Query: 150 DMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCRCYTELERGND 209
+ L ++PKKTI QL S E+ G FVV A + G ++ EW YP+C+C+ + +
Sbjct: 267 EFLRMYPKKTISQLFNSEED------GFFVVSAIVSGFVEGEEWWYPACKCHRSVTADSG 320
Query: 210 VYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEVMNSEEAKIF 269
Y C C + + + + RY KL V DG +VFVL D + L+ C ++ +
Sbjct: 321 AYYCKGCDKHVIQMVPRYKIKLRVDDGTGDSVFVLFDSDVHYLLEKQCSVLVAKSKGDDV 380
Query: 270 GEYPSILEDKLVGKELLFKV-----RAGFGITYKRQKIYEVLRICDDSEIIKMFKTEKLF 324
G YP + L GK LFKV GF Y V R+C DS I+ F
Sbjct: 381 GFYPPEIV-MLKGKRFLFKVDKPVISGGF-----FDGSYRVKRVCADSSIVAKFAMNGYN 434
Query: 325 ITPVK 329
TP +
Sbjct: 435 YTPTE 439
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 10 DNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--HP 67
D V+ I +W++R RV+ +W VP + P +S++MVL+D +K +A + K +
Sbjct: 6 DLVNDIVPGRLNWRIRVRVVRMWEVPTFLKPNQANSLEMVLLDQMGVKIQAIVRKQLIYV 65
Query: 68 FCPKIVEGQVYKISFFSIVDNIGA 91
F ++ EG+VY IS+FS+ + G+
Sbjct: 66 FQKRLREGEVYNISYFSVAPSTGS 89
>Medtr6g051890.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:18071124-18068908 | 20130731
Length = 399
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 124/276 (44%), Gaps = 40/276 (14%)
Query: 8 HYDNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS-- 65
++D + + W++ R +W + + P +S++MVLID+K K ++ K
Sbjct: 8 NFDALCHVLLGREAWRIEMRTARLWTIHTFVKPDQINSVEMVLIDDKGGKIHVTVRKQLL 67
Query: 66 HPFCPKIVEGQVYKISFFSIVDNIGAK----HVIGILSAASSEKLLIKDNRV-------- 113
+ F +V+G+VYKI++FS+ ++G+ H I+ +++ L +++ +
Sbjct: 68 YLFQHLLVKGKVYKIAYFSVAPSVGSYRSTLHPHKIVFQMNTKVLECENSLISPCGLTFS 127
Query: 114 ---------------YKTM----DIQLLDKRFDGINSKLPVEYLPKLDKNVDIHVDMLEL 154
+ M DI + GI S PV + P + L L
Sbjct: 128 NISKICSHTDEYDYLFDVMGVMTDISVERIFVHGIGSSEPVPF-PGPRVRPYMEDAFLGL 186
Query: 155 HPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCRCYTELERGNDVYRCN 214
+P+KTI +L + ++ G+FVV + GL+++ EW YP+C C+ L Y C
Sbjct: 187 YPQKTIAELQGTSKD------GLFVVSGIVDGLVEDEEWYYPACTCHRSLMPDYGAYYCK 240
Query: 215 RCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEAR 250
C + + R + V DG D VFVL D + +
Sbjct: 241 DCAEHVFHMVPRCKVNIHVTDGTDEAVFVLFDYDVK 276
>Medtr0032s0020.1 | PIF1-like helicase | LC |
scaffold0032:18195-20915 | 20130731
Length = 586
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 58/318 (18%)
Query: 24 LRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKSHPFCPK-----IVEGQVY 78
+ RVL +W+V ++P +S +++L+D + + A++ PFC + +VE +VY
Sbjct: 20 IMVRVLRLWDVESTLMPGRVNSSELLLMDIEGYRMHATV---PPFCVEKFRHMLVENRVY 76
Query: 79 KISFFSIVDNI-------GAKHVI---------GILSAASSEKLLI-------KDNRVYK 115
I+ F ++ N A H++ SA +L + NR+
Sbjct: 77 IITMFFVLPNFDEFMSTSSAYHIVFHQDTDLMATTCSAIPKCRLSLITSAIPDSTNRLSS 136
Query: 116 TMDIQLLDKRF--DGINSKLPVEYLPKLDKNVDIHVDMLELHPKKTIPQLLLSRENFYGI 173
+ +L D+R G S + V++ P D+ + +++PKKTI +LL++ E
Sbjct: 137 VLKFELTDERLLTAGPKSSI-VKFNPNFGMCDDVSLSFSKMYPKKTIKELLVTPEG---- 191
Query: 174 YKGIFVVHAWIVGLLKECEWSYPSCRCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEV 233
G FVV A + G +K +W YP C C + + Y C+ C RT ++ F++ V
Sbjct: 192 --GFFVVCARVAGFMKVDQWFYPVCDCNSFMGNEFGFYLCDVCHRTSFNVTPKFRFEVSV 249
Query: 234 YDGVDSTVFVLNDCEARELINIPCEEVMNSEEAKIFGEYPSILEDKLVGKELLFKVRAGF 293
D +F + D L+ I ++ S L KL G E +F V+
Sbjct: 250 EDDGGVAIFHILD---HILLGISSLKL-------------SFL--KLNGTECMFLVKKDP 291
Query: 294 GITYKRQKIYEVLRICDD 311
+ ++VLR+ DD
Sbjct: 292 AARFFPDYGFDVLRVSDD 309
>Medtr4g046077.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:16158485-16160769 | 20130731
Length = 405
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 33/234 (14%)
Query: 128 GINSKLPVEYLPKLDKNVDIHV--DMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIV 185
GIN + +PKL V V D L +HPKKT+ QL + E+ G FVV+A
Sbjct: 131 GIN----ISSVPKLGPCVRASVQEDFLHMHPKKTLAQLHDTPED------GTFVVYATFN 180
Query: 186 GLLKECEWSYPSCRCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLN 245
G + + YP+C+C+ + ++ Y C C + + + + RY K+ V D VFV+
Sbjct: 181 GFVDGEDCWYPACKCHRSVAPDSEAYYCKGCVKNVFQMVPRYRVKINVSDATSVAVFVMF 240
Query: 246 DCEARELINIPCEEVMNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEV 305
+ + ++N+ C ++++ +A+ G Y + KL+ R+ V
Sbjct: 241 AGDVQNILNLSCSSLVSASKAENAGFYSTEFA-KLI-----------------RRCCLRV 282
Query: 306 LRICDDSEIIKMFKTEKLFITPVKDKFVP--PFIKLEDAHENSKAGEKHVSNLI 357
R+CD+ +I+ F + + TP ++ VP + E + ++ VSN++
Sbjct: 283 KRVCDEPSVIQSFDSIGVEHTPSENP-VPGTSLLPAEPEEKEDPQADEFVSNVV 335
>Medtr1g075850.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:33615520-33612872 | 20130731
Length = 528
Score = 81.3 bits (199), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 47/237 (19%)
Query: 135 VEYLPKLDKN--VDIHVDMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECE 192
V +P++ V + D L +PKKT+ QL + ++ G+FVV++ I GL+ +
Sbjct: 243 VSSIPRIGSRSKVSLEEDFLRTYPKKTLEQLHSTFDD------GVFVVYSTISGLVDHED 296
Query: 193 WSYPSCRCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEAREL 252
W YP+C+C+ + + + C C + + + + R+ K+ V D ++
Sbjct: 297 WWYPACKCHRSVSADSGAFYCKGCAKHVFQMVPRFRVKVNVSDAENA------------- 343
Query: 253 INIPCEEVMNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDS 312
G YP+ E KL GK +LFK+ G + + V R+CDD
Sbjct: 344 -----------------GHYPAEFE-KLKGKRMLFKIEKCTGRSIFFDGSFRVKRVCDDP 385
Query: 313 EIIKMFKTEKLFITP----VKDKFV---PPFIKLEDAHENSKAGEKHVSNLICNGAA 362
II+ F T TP V FV PP + D E S + + VS+ I A+
Sbjct: 386 AIIQSFDTLGGQYTPSKISVAKAFVDETPPAVPHSDGDE-SASSDVFVSDQIVTPAS 441
>Medtr8g062060.1 | DUF223 domain protein | LC |
chr8:25911934-25914219 | 20130731
Length = 530
Score = 77.0 bits (188), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 135 VEYLPKLDKNVDIHVDMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWS 194
V++ P +VD+ + +++PKK+I +LL+ E G FVV A + G K +W
Sbjct: 252 VKFNPNFRMSVDVSLSFSKMYPKKSIKELLVPPEG------GFFVVCARVAGFRKVDQWF 305
Query: 195 YPSCRCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELIN 254
YP C C + + Y C+ C RT ++ F+L V D +F + D ++ +
Sbjct: 306 YPVCDCNSFMGNEFGFYLCDVCHRTSFNVTPKFRFELSVEDDGGVAIFHILDRILLDISS 365
Query: 255 IPCEEVMNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEI 314
+ C ++ + G KL G+E +F V+ + ++VLR+ DDS++
Sbjct: 366 LKC-SFLDRKLPLTRGHL-----QKLNGRECMFLVKKYHAARFLPGYGFDVLRVSDDSKV 419
Query: 315 IKMFKTEKLFITPVKDKFV 333
++ + E TP K FV
Sbjct: 420 VRSYYDEGRSYTPSKVSFV 438
>Medtr3g081610.1 | transmembrane protein, putative | LC |
chr3:36944252-36945254 | 20130731
Length = 221
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 44/208 (21%)
Query: 127 DGINSKLPVEYLPKLDKNVDIHV--DMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWI 184
DG+N + +PKL V D L ++PK+T+ QL S E+ G+F+V A I
Sbjct: 14 DGVN----LSSVPKLQSRARASVEDDFLRMYPKRTLSQLNSSNED------GLFIVCATI 63
Query: 185 VGLLKECEWSYPSCRCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVL 244
G +W YP+C+C+ + + Y C C + + + R
Sbjct: 64 DGE----DWWYPACKCHRSVTPDSGAYYCKDCVKHVFHMVPR------------------ 101
Query: 245 NDCEARELINIPCEEVMNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYE 304
LI IPC +++ +A+ G YP+ +KL G+++LFKV +++ +
Sbjct: 102 -------LICIPCSTLVSVSKAENAGFYPTHF-NKLKGRKMLFKVERCTSVSFMSDGSFR 153
Query: 305 VLRICDDSEIIKMFKTEKLFI--TPVKD 330
V R+C+++ +++ F + + TP KD
Sbjct: 154 VKRVCEEASVLEQFNPVDVEVESTPFKD 181
>Medtr8g059025.1 | animal RPA1 domain protein | LC |
chr8:20549873-20550376 | 20130731
Length = 138
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
Query: 9 YDNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--H 66
+D++S+I W+++ R+L +W VP + P +S++MVLID+K K AS+ K +
Sbjct: 5 FDSLSEIVPDRDGWRIKVRILRLWEVPTLLRPDQTNSLEMVLIDDKGAKIHASVRKQLLY 64
Query: 67 PFCPKIVEGQVYKISFFSIVDNIGA 91
F PK+ EG+VYK+SFFS+ ++G+
Sbjct: 65 VFQPKLSEGKVYKMSFFSVAPSVGS 89
>Medtr3g056270.1 | replication factor-A carboxy-terminal domain
protein | HC | chr3:22409504-22413525 | 20130731
Length = 719
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 141 LDKNVDIHVDMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCRC 200
++ ++D D L P+ TI L S++ +G++VV + ++ W Y +C C
Sbjct: 416 VEPSIDPLQDFLFNTPRTTIQGLKDSQQ------EGMYVVLGTVKQIVNPENWYYTACMC 469
Query: 201 YTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEV 260
+ ++ C +C R + K RYS K+ V D D FVL D +A L N C ++
Sbjct: 470 NKSVYPAEGMHFCEKCNRHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADI 529
Query: 261 MNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMFKT 320
+ + A G P+ + LV LFKV I+ + ++ + V ++C D II FK
Sbjct: 530 LETHRAD-EGVLPTEI-GALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQFKA 587
Query: 321 E 321
+
Sbjct: 588 K 588
>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830642-11833873 | 20130731
Length = 560
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 141 LDKNVDIHVDMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCRC 200
++ ++D D L P+ TI L S++ +G++VV + ++ W Y +C C
Sbjct: 257 VEPSIDPLQDFLFNTPRTTIQGLKDSQQ------EGMYVVLGTVKQIVNPENWYYTACMC 310
Query: 201 YTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEV 260
+ ++ C +C R + K RYS K+ V D D FVL D +A L N C ++
Sbjct: 311 NKSVYPAEGMHFCEKCNRHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADI 370
Query: 261 MNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMFKT 320
+ + A G P+ + LV LFKV I+ + ++ + V ++C D II FK
Sbjct: 371 LETHRAD-EGVLPTEIA-ALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQFKA 428
Query: 321 E 321
+
Sbjct: 429 K 429
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 7 LHYDNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS- 65
L ++ +SQIS W ++ARV+ +W V + P S++MVL+D++ + AS+ K+
Sbjct: 3 LTFEPISQISSSKPAWNIKARVVRLWKVSDFNRNTLPFSIEMVLMDSEGSRIHASIKKTL 62
Query: 66 -HPFCPKIVEGQVYKISFFSIVDNIGA 91
+ F +I EG+VY + N G+
Sbjct: 63 LYKFQSEIREGKVYSFENMGVAANGGS 89
>Medtr4g036240.2 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 480
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 141 LDKNVDIHVDMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCRC 200
++ ++D D L P+ TI L S++ +G++VV + ++ W Y +C C
Sbjct: 177 VEPSIDPLQDFLFNTPRTTIQGLKDSQQ------EGMYVVLGTVKQIVNPENWYYTACMC 230
Query: 201 YTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEV 260
+ ++ C +C R + K RYS K+ V D D FVL D +A L N C ++
Sbjct: 231 NKSVYPAEGMHFCEKCNRHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADI 290
Query: 261 MNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMFKT 320
+ + A G P+ + LV LFKV I+ + ++ + V ++C D II FK
Sbjct: 291 LETHRAD-EGVLPTEIA-ALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQFKA 348
Query: 321 E 321
+
Sbjct: 349 K 349
>Medtr4g036240.3 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 417
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 8/181 (4%)
Query: 141 LDKNVDIHVDMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCRC 200
++ ++D D L P+ TI L S++ +G++VV + ++ W Y +C C
Sbjct: 114 VEPSIDPLQDFLFNTPRTTIQGLKDSQQ------EGMYVVLGTVKQIVNPENWYYTACMC 167
Query: 201 YTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEV 260
+ ++ C +C R + K RYS K+ V D D FVL D +A L N C ++
Sbjct: 168 NKSVYPAEGMHFCEKCNRHVVKVFPRYSIKVRVVDDSDCATFVLFDRDATMLFNKSCADI 227
Query: 261 MNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMFKT 320
+ + A G P+ + LV LFKV I+ + ++ + V ++C D II FK
Sbjct: 228 LETHRAD-EGVLPTEIA-ALVNCTYLFKVEFKTAISPRFEQSFRVKKVCTDGVIINQFKA 285
Query: 321 E 321
+
Sbjct: 286 K 286
>Medtr4g040040.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:14260390-14261092 | 20130731
Length = 168
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 193 WSYPSCRCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEAREL 252
W + SC C+ ++ + Y C RC + + R+ V D S F+++D A E
Sbjct: 17 WWFLSCICHEQVVPDSPAYYCERCNKHVLMITPRFRITFHVTDNTGSATFLMHDSVAAEF 76
Query: 253 INIPCEEVMNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDS 312
IPC +++ E Y +VGK LFKV + G +K Y + +I DD
Sbjct: 77 FGIPCSKMLEFGENVGMSSYVPDELLNMVGKCYLFKVFSKVGAGCDGEKCYPISKINDDE 136
Query: 313 EIIKMFKTEKLFI----TPVKDKFVPPFIKLE 340
E++ FK + TP K++ KL
Sbjct: 137 ELLGRFKRHNSVVIKLDTPSVSKYMSILEKLH 168
>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21416239-21412307 | 20130731
Length = 549
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 145 VDIHVDMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCR-CYTE 203
V + D L L P T+ L E + F V + ++ + +W Y SC C +
Sbjct: 262 VSVEEDFLNLSPMTTVEGLKDCAE------EKCFAVFGTVNVIVDDSDWWYTSCVVCNKK 315
Query: 204 LERGNDVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEVMNS 263
+ +Y C++C + + RY K+ V D DS FVL D +A EL C +++
Sbjct: 316 VYPDEKMYFCSKCNKHVLNVTPRYMIKMRVVDHTDSATFVLFDRDAAELFKKTCADMI-- 373
Query: 264 EEAKIFGEYPSILED--KLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMFKTE 321
E + + + +D +V K LFKV G + +K Y V R+ D +++ F+T+
Sbjct: 374 ESCGMGTDASEVPKDILAMVEKSYLFKVETNLGSSTMYEKSYRVKRVTADPVLVEKFQTK 433
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 10 DNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--HP 67
D +S IS +W +R RV+ +W V + + P S++MVL+DNK + AS+ ++ +
Sbjct: 6 DLISDISPSKENWNIRVRVVRLWFVRDMKKDQLPYSLEMVLMDNKGDRINASVRRTLIYK 65
Query: 68 FCPKIVEGQVYKISFFSIVDNIGA 91
+ ++ E +V+ I FS+ N+G+
Sbjct: 66 YEKELREDRVFSIGNFSVASNVGS 89
>Medtr6g445520.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:15886770-15884303 | 20130731
Length = 428
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 150 DMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCRCYTELERGND 209
D L++ P+KT+ L +E + FVV A + ++ EW Y +C C ++
Sbjct: 133 DFLKITPRKTVEDL---KE---CAMESCFVVKATVKFVIDTDEWWYTACVCNKKVVPDEK 186
Query: 210 VYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEVMNSEEAKIF 269
++ C +C + + RY K+ V D DS FV+ D +A L+ +V+ S +
Sbjct: 187 MFFCAKCNKHVIHVCPRYMIKVRVIDETDSATFVIFDRDATLLLKKTAADVIESMGSDES 246
Query: 270 GEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMF 318
G P + LV LFKV + +K Y V RI ++ +++K F
Sbjct: 247 GTLPKEIS-SLVESTFLFKVETNISTDARFEKSYRVRRISNNVDLLKRF 294
>Medtr1g050500.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:19683996-19681538 | 20130731
Length = 543
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 15/187 (8%)
Query: 153 ELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCRCYTELERGNDVYR 212
++P K + +L+ S E+ G+FVV+A +V ++ W YP C C L N Y
Sbjct: 189 RMYPVKKVYELVQSVED------GLFVVYAEVVECIESHTWWYPMCVCQRILPMRNGAYY 242
Query: 213 CNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEVMNSEEAKIFGEY 272
C C ++ K + R K+ V D D+ V D +L++ + N+ +
Sbjct: 243 CRHCDMSVFKVMLR--VKILVVDDTDAAVLEFFD----DLLHGISSKNYNALGPNVVAT- 295
Query: 273 PSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMFKTEKLFITPVKDKF 332
+I + L GK+LLF VR G +EV++I DD +I ++ + V KF
Sbjct: 296 -AIGMELLQGKKLLFIVRKTLGFNATSGDAFEVVQITDDQGLINAYRLNCPACSDVS-KF 353
Query: 333 VPPFIKL 339
P F +
Sbjct: 354 HPTFTAI 360
>Medtr7g051400.1 | replication factor-A carboxy-terminal domain
protein | LC | chr7:18001910-18004476 | 20130731
Length = 542
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Query: 150 DMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSC-RCYTELERGN 208
DML+ + TI L+ + E GI V A I G+ E W Y +C +C +
Sbjct: 246 DMLQT-KRMTIEDLIEATEQCQGI------VLATICGIESEYSWYYQACTKCVGRVRTVA 298
Query: 209 DVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEVMNSEEAKI 268
C +C T + R+ ++V D ST F+L D + +N +++++++
Sbjct: 299 SRLYCGKC-NTGRNAVARFKLHVQVIDNTGSTSFILFDRNVSKYVNGTIQDMIDAQPNN- 356
Query: 269 FGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMF 318
+YPS L D VGK++LFKV G + Y V R + ++I F
Sbjct: 357 SSDYPSDL-DSFVGKQMLFKVEVSDGNLLHNWRNYVVKRTTAEEDVINQF 405
>Medtr1g105785.1 | replication factor-A carboxy-terminal domain
protein | HC | chr1:47732917-47735741 | 20130731
Length = 566
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 11/170 (6%)
Query: 150 DMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSC-RCYTELERGN 208
DML+ + TI L+ + E GI V A I G+ E W Y +C +C +
Sbjct: 268 DMLQTK-RMTIEDLIEATEQCQGI------VLATICGIESEYSWYYQACTKCAGRVRTVA 320
Query: 209 DVYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEVMNSEEAKI 268
C +C T + R+ ++V D ST F+L D +N +++++++
Sbjct: 321 GRLYCGKC-NTGRNAVPRFKLHVQVMDNTGSTSFILFDRNVSSYVNRTVQDMIDAQPNN- 378
Query: 269 FGEYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMF 318
+YPS L D VGK +LFKV G + Y V R + ++I F
Sbjct: 379 SSDYPSDL-DSFVGKRMLFKVEVSDGNLLHNWRNYAVKRTTAEEDVINQF 427
>Medtr4g032585.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:11228071-11229546 | 20130731
Length = 286
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 176 GIFVVHAWIVGLLKECEWSYPSC-RCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVY 234
G +V A I G+ E W Y +C +C + C RC ++ + R+ ++V
Sbjct: 31 GNVIVFASICGIEPEYGWYYDACTKCAGRITIVAGRMFCPRCKQS-RNVVPRFKLHVQVM 89
Query: 235 DGVDSTVFVLNDCEARELINIPCEEVMNSEEAKIFGE----YPSILEDKLVGKELLFKVR 290
D ST F+L D R + N V + +A+ G+ YP+ LE LVGK++LFKV
Sbjct: 90 DTTGSTSFILFD---RNVSNYVGRSVQDLIDAQGQGDNSLGYPADLE-VLVGKKMLFKVD 145
Query: 291 AGFGITYKRQKIYEVLRICDDSEIIKMF 318
G + Y V R DD+E+I+MF
Sbjct: 146 ITNGNLLHNWRNYGVKRTSDDAELIQMF 173
>Medtr4g032565.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:11217564-11219039 | 20130731
Length = 286
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 10/148 (6%)
Query: 176 GIFVVHAWIVGLLKECEWSYPSC-RCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVY 234
G +V A I G+ E W Y +C +C + C RC ++ + R+ ++V
Sbjct: 31 GNVIVFASICGIEPEYGWYYDACTKCAGRITIVAGRMFCPRCKQS-RNAVPRFKLHVQVM 89
Query: 235 DGVDSTVFVLNDCEARELINIPCEEVMNSEEAKIFGE----YPSILEDKLVGKELLFKVR 290
D ST F+L D R + N V + +A+ G+ YP+ LE LVGK++LFKV
Sbjct: 90 DTTGSTSFILFD---RNVSNYVGRSVQDLIDAQGQGDNSLGYPADLE-VLVGKKMLFKVD 145
Query: 291 AGFGITYKRQKIYEVLRICDDSEIIKMF 318
G + Y V R DD+E+I+MF
Sbjct: 146 ITNGNLLHNWRNYGVKRTSDDAELIQMF 173
>Medtr7g110100.1 | replication factor-A carboxy-terminal domain
protein | HC | chr7:45127464-45130150 | 20130731
Length = 526
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 15/231 (6%)
Query: 177 IFVVHAWIVGLLKECEWSYPSC-RCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYD 235
+ +V A I+G+ E W Y +C +C ++ C RC ++ + R+ ++V D
Sbjct: 288 VVIVLASIIGIEAEYSWYYDACTKCAGRIKIIAGRMFCPRCNQS-RNAVPRFKLHVQVMD 346
Query: 236 GVDSTVFVLNDCEARELINIPCEEVMNSE-EAKIFGEYPSILEDKLVGKELLFKVRAGFG 294
ST F+L D + +++++S+ + YPS L D LVGK++LFKV G
Sbjct: 347 NTGSTSFILFDRNVSNYVGKSVQDLIDSQGQGNNDKGYPSDL-DVLVGKKMLFKVEITDG 405
Query: 295 ITYKRQKIYEVLRICDDSEIIKMF-KTEKLFITPVKDKFVPPFIKLEDA---HENSKAGE 350
+ + Y V R DD ++I F K L IT D+ + L A EN K E
Sbjct: 406 NLHLSWRNYGVKRTTDDPDLISQFSKRHNLKITIDDDEDCGEDVALTHAAVVSENVKMIE 465
Query: 351 KHVSNLICNGAAAGKHN-------LRLKSSAIGCQISTAAIGHRSLKRKQK 394
SN G+ R + + ++ +G RS+ + +K
Sbjct: 466 GGDSNKTELDQKEGEKTPCSKSGEKRSADADVSAEVGIDILGERSINKPRK 516
>Medtr0042s0170.1 | replication factor-A carboxy-terminal domain
protein | LC | scaffold0042:77181-79334 | 20130731
Length = 400
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Query: 211 YRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEVMNSEEAKIFG 270
Y C C + + + + RY K+ V DG VFV+ D + L+ C +++++ +A+ G
Sbjct: 153 YYCKGCSKHVFQMVPRYKVKIRVDDGDGCVVFVVFDGDMHNLLGKQCSDLVSAAKAENVG 212
Query: 271 EYPSILEDKLVGKELLFKVRAGFGITYKRQKIYEVLRICDDSEIIKMFKTEKLFITPVKD 330
YP KL G LLFKV + Y V RIC D+ +I+ F + V +
Sbjct: 213 FYPD-EHLKLKGMYLLFKVEKSSVASVLFDGSYRVRRICSDAAVIESFTAQATVC--VDE 269
Query: 331 KFVP 334
+ VP
Sbjct: 270 QVVP 273
>Medtr5g057125.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:23566558-23564881 | 20130731
Length = 298
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 21/145 (14%)
Query: 176 GIFVVHAWIVGLLKECEWSYPSCRCYTELERGNDVYRCNRCFRTIEKFIN-RYSFKLEVY 234
G +VV A I+G+ +W Y SC N+CF+ ++ R+ + V
Sbjct: 84 GAYVVLAKIIGIDTNKKWCYVSC---------------NKCFKKVKPVCTKRFMVHIHVM 128
Query: 235 DGVDSTVFVLNDCEARELINIPCEEVMNSEEAKIFGEYPSILEDKLVGKELLFKVRAGFG 294
D ST FVL D + + +E M +YP+ D L KE+LFK+
Sbjct: 129 DDSGSTTFVLFDGVISQHFGMTAKEQM----GMTTNDYPTEF-DNLHDKEMLFKLEINQK 183
Query: 295 ITYKRQKIYEVLRICDDSEIIKMFK 319
+R Y V ++CDD+EII FK
Sbjct: 184 NVEQRFYTYAVKKMCDDNEIIDEFK 208
>Medtr2g008650.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:1569207-1566568 | 20130731
Length = 555
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 177 IFVVHAWIVGLLKECEWSYPSCRCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDG 236
++VV I ++ + Y +C C + + ++ C +C R ++K +RY ++ D
Sbjct: 291 VYVVLGTIKRIVNRENFWYTACICSKAVIPDSQMFYCEKCDRHVKKVFSRYCLRVRAIDH 350
Query: 237 VDSTVFVLNDCEARELINIPCEEVMNSEEAKIF-GEYPSILEDKLVGKELLFKVRAGFGI 295
D V+ D EA L N C +++ + G P + ++GK LFKV
Sbjct: 351 TDCATLVIFDKEATALFNKSCVDMLAEHGVAVSEGHLPPEIAG-IIGKTFLFKVETKVDQ 409
Query: 296 TYKRQKIYEVLRICDDSEIIKMFK 319
+ ++ + V +IC ++I FK
Sbjct: 410 NPRFEQSFRVRKICAMPDVINEFK 433
>Medtr8g479260.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:33777150-33779789 | 20130731
Length = 555
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 177 IFVVHAWIVGLLKECEWSYPSCRCYTELERGNDVYRCNRCFRTIEKFINRYSFKLEVYDG 236
++VV I ++ + Y +C C + + ++ C +C R ++K +RY ++ D
Sbjct: 291 VYVVLGTIKRIVNRENFWYTACICSKAVIPDSQMFYCEKCDRHVKKVFSRYCLRVRAIDH 350
Query: 237 VDSTVFVLNDCEARELINIPCEEVMNSEEAKIF-GEYPSILEDKLVGKELLFKVRAGFGI 295
D V+ D EA L N C +++ + G P + ++GK LFKV
Sbjct: 351 TDCATLVIFDKEATALFNKSCVDMLAEHGVAVSEGHLPPEIAG-IIGKTFLFKVETKVDQ 409
Query: 296 TYKRQKIYEVLRICDDSEIIKMFK 319
+ ++ + V +IC ++I FK
Sbjct: 410 NPRFEQSFRVRKICAMPDVINEFK 433
>Medtr8g467450.1 | animal RPA1 domain protein | LC |
chr8:24241111-24240561 | 20130731
Length = 142
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 9 YDNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--H 66
+D+++ + W+ + ++L +W VP + P+S++MVLID K K A++ K +
Sbjct: 5 FDSLAAVVPWREGWRFKVKILRMWEVPAFLNLDQPNSLEMVLIDEKGDKIHATVRKQLLY 64
Query: 67 PFCPKIVEGQVYKISFFSIVDNIGAKH 93
F K+ E YK+ +FSI N+G H
Sbjct: 65 VFQKKLAEEDAYKMFYFSIAPNVGYYH 91
>Medtr4g134870.1 | AP2 domain class transcription factor | LC |
chr4:56537430-56539491 | 20130731
Length = 425
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 14/133 (10%)
Query: 150 DMLELHPKKTIPQLLLSRENFYGIYKGIFVVHAWIVGLLKECEWSYPSCRCYTELERGND 209
+ + HPKKTI +L+ E +G+FVV + GL++ EW Y + RC + +
Sbjct: 143 EFIRTHPKKTIDELVCLDE------EGVFVVGGKVEGLVEGAEWWYSAYRCNRSVLAASG 196
Query: 210 VYRCNRCFRTIEKFINRYSFKLEVYDGVDSTVFVLNDCEARELINIPCEEVMNSEEAKIF 269
Y CN C R + K++V DG + VL D + ++ C +++ + +
Sbjct: 197 SYYCNGCVRHCK-------VKVKVSDGECKVILVLFDNDVSFIVKKSCAKLVADVKGENA 249
Query: 270 GEYPSILEDKLVG 282
YPS L++ L+G
Sbjct: 250 DFYPSELKN-LIG 261
>Medtr3g095950.1 | animal RPA1 domain protein | HC |
chr3:43845609-43846394 | 20130731
Length = 172
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 12 VSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--HPFC 69
+S +S + W L RV+ W ++ K P SM++VLID K + AS+ ++ + F
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFK 67
Query: 70 PKIVEGQVYKISFFSIVDNIGA 91
++ EG V+ IS F++ NIG+
Sbjct: 68 NQLQEGMVFTISSFNVASNIGS 89
>Medtr7g089660.1 | animal RPA1 domain protein | LC |
chr7:35114160-35121568 | 20130731
Length = 236
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 12 VSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--HPFC 69
+S +S + W L RV+ W + K P SM++VLID K + AS+ ++ + F
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQNYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFK 67
Query: 70 PKIVEGQVYKISFFSIVDNIGA 91
++ EG V+ IS F++ NIG+
Sbjct: 68 NQLQEGMVFTISSFNVASNIGS 89
>Medtr3g116750.1 | animal RPA1 domain protein | HC |
chr3:54610965-54611750 | 20130731
Length = 172
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 12 VSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--HPFC 69
+S +S + W L RV W ++ K P SM++VLID K + AS+ ++ + F
Sbjct: 8 ISNVSPRKQSWTLVVRVARAWFGQDYKNKKLPFSMELVLIDRKGDRIGASIRRTLIYKFK 67
Query: 70 PKIVEGQVYKISFFSIVDNIGA 91
++ EG V+ IS F++ NIG+
Sbjct: 68 NQLQEGMVFTISSFNVASNIGS 89
>Medtr8g463820.1 | animal RPA1 domain protein | LC |
chr8:22514633-22516142 | 20130731
Length = 283
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 9 YDNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--H 66
+D +S +S + W L RV+ W ++ K P SM++VL+D K + AS+ ++ +
Sbjct: 5 HDFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIY 64
Query: 67 PFCPKIVEGQVYKISFFSIVDNIGA 91
F ++ EG V+ IS F + N G+
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGS 89
>Medtr8g088810.1 | DUF223 domain protein | LC |
chr8:36895897-36893498 | 20130731
Length = 306
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 9 YDNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--H 66
+D +S +S + W L RV+ W ++ K P SM+ VLID K + AS+ ++ +
Sbjct: 5 HDFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMEFVLIDRKGDQIGASIRRTLIY 64
Query: 67 PFCPKIVEGQVYKISFFSIVDNIGA 91
F ++ EG V+ IS F + N G+
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGS 89
>Medtr8g096680.1 | animal RPA1 domain protein | HC |
chr8:40558216-40559002 | 20130731
Length = 172
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 9 YDNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--H 66
+D +S +S + W L RV+ W ++ K P SM++VL+D K + AS+ ++ +
Sbjct: 5 HDFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIY 64
Query: 67 PFCPKIVEGQVYKISFFSIVDNIGA 91
F ++ EG V+ IS F + N G+
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGS 89
>Medtr1g036740.1 | animal RPA1 domain protein | HC |
chr1:13497342-13498128 | 20130731
Length = 172
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Query: 9 YDNVSQISKKNYHWKLRARVLSVWNVPEHMLPKSPSSMDMVLIDNKWMKFEASLCKS--H 66
+D +S +S + W L RV+ W ++ K P SM++VL+D K + AS+ ++ +
Sbjct: 5 HDFISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSMELVLMDRKGDRIGASIRRTLIY 64
Query: 67 PFCPKIVEGQVYKISFFSIVDNIGA 91
F ++ EG V+ IS F + N G+
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGS 89