Miyakogusa Predicted Gene

Lj0g3v0087839.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087839.2 tr|Q9W0I7|Q9W0I7_DROME IP07275p OS=Drosophila
melanogaster GN=Psf1 PE=2 SV=2,32.38,3e-19,PARTNER OF SLD5,NULL;
PARTNER OF SLD5,GINS complex, subunit Psf1; Sld5,GINS
complex,CUFF.4694.2
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g052500.1 | DNA replication complex GINS protein PSF1 | HC...   333   4e-92
Medtr3g005080.1 | DNA replication complex GINS protein PSF1 | HC...   331   2e-91
Medtr7g052330.1 | partner of SLD five protein, putative | HC | c...   122   2e-28

>Medtr1g052500.1 | DNA replication complex GINS protein PSF1 | HC |
           chr1:21357121-21361187 | 20130731
          Length = 199

 Score =  333 bits (855), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 156/198 (78%), Positives = 176/198 (88%)

Query: 1   MYGRKACQLVKELAGGEKGQFTPFNSDLFEQVVAECSQHHLELQSLIRKIQDEGLDVQTA 60
           M+GRKACQLVKE A GEKGQ TPFN DLFEQVV EC+QHHL+LQSLIRK+Q+EGLDVQTA
Sbjct: 1   MFGRKACQLVKEFASGEKGQLTPFNKDLFEQVVGECNQHHLDLQSLIRKMQEEGLDVQTA 60

Query: 61  RNADHYGALIHHLSLVRNKRCLMAYTYNRAENLRSLVWKVGHGLPQEIEEKICHSEKEYF 120
           RNADHYGALIH  S+VRNKRCLMAY YNRAE +RSL+WK+G  +P+EIEEK+ H E+EYF
Sbjct: 61  RNADHYGALIHLFSIVRNKRCLMAYVYNRAETIRSLLWKIGPVIPKEIEEKLDHREEEYF 120

Query: 121 KKHSSALKSYMSQLLVDLTVDMVPPKDPCIQVRVLEDIGEGIVLSDDKTYNLALQSIHLL 180
           KKHSSALKSYMS++ VDLTVDMVPPKDP IQVRVLEDI EGIVLSDDK  N A  S+H L
Sbjct: 121 KKHSSALKSYMSKVFVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHFL 180

Query: 181 KRTDAEQFIARGLMEEIT 198
           KRTDAE++I+RGLMEE+T
Sbjct: 181 KRTDAEKYISRGLMEELT 198


>Medtr3g005080.1 | DNA replication complex GINS protein PSF1 | HC |
           chr3:43449-48093 | 20130731
          Length = 199

 Score =  331 bits (849), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 155/198 (78%), Positives = 175/198 (88%)

Query: 1   MYGRKACQLVKELAGGEKGQFTPFNSDLFEQVVAECSQHHLELQSLIRKIQDEGLDVQTA 60
           M+GRKACQLVKE A GEKGQ TPFN DLFEQVV ECSQHHL+LQSLIRK+Q+EGLDVQTA
Sbjct: 1   MFGRKACQLVKEFASGEKGQLTPFNKDLFEQVVGECSQHHLDLQSLIRKMQEEGLDVQTA 60

Query: 61  RNADHYGALIHHLSLVRNKRCLMAYTYNRAENLRSLVWKVGHGLPQEIEEKICHSEKEYF 120
           RNADHYGALIH  S+VRNKRCL AY YNRAE +R+L+WK+G  +P+EIEEK+ H E+EYF
Sbjct: 61  RNADHYGALIHLFSIVRNKRCLTAYVYNRAETIRNLLWKIGPVIPKEIEEKLDHREEEYF 120

Query: 121 KKHSSALKSYMSQLLVDLTVDMVPPKDPCIQVRVLEDIGEGIVLSDDKTYNLALQSIHLL 180
           KKHSSALKSYMS++ VDLTVDMVPPKDP IQVRVLEDI EGIVLSDDK  N A  S+H L
Sbjct: 121 KKHSSALKSYMSKVFVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHFL 180

Query: 181 KRTDAEQFIARGLMEEIT 198
           KRTDAE++I+RGLMEE+T
Sbjct: 181 KRTDAEKYISRGLMEELT 198


>Medtr7g052330.1 | partner of SLD five protein, putative | HC |
           chr7:18383819-18380985 | 20130731
          Length = 154

 Score =  122 bits (307), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/188 (40%), Positives = 95/188 (50%), Gaps = 65/188 (34%)

Query: 5   KACQLVKELAGGEKGQFTPFNSDLFEQVVAECSQHHLELQSLIRKIQDEGLDVQTARNAD 64
           KAC+LVKE A G+KGQ                 +HHL  +  +                 
Sbjct: 29  KACELVKEFATGKKGQL----------------RHHLRKKDWM----------------- 55

Query: 65  HYGALIHHLSLVRNKRCLMAYTYNRAENLRSLVWKVGHGLPQEIEEKICHSEKEYFKKHS 124
                        +KR  M   YN+AE  R+L+WK+G  LP+EIEEK+ H E++YFKKHS
Sbjct: 56  -------------SKRLEM---YNKAETTRNLLWKIGPLLPKEIEEKLNHWEEDYFKKHS 99

Query: 125 SALKSYMSQLLVDLTVDMVPPKDPCIQVRVLEDIGEGIVLSDDKTYNLALQSIHLLKRTD 184
                           D+VPPKD   QVRVLEDI EGIVLSDDK  N A  SI  LKR D
Sbjct: 100 ----------------DIVPPKDSYFQVRVLEDIREGIVLSDDKNPNFARHSIQFLKRND 143

Query: 185 AEQFIARG 192
           AE++I+R 
Sbjct: 144 AEKYISRA 151