Miyakogusa Predicted Gene

Lj0g3v0087579.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087579.1 Non Characterized Hit- tr|I1KDQ3|I1KDQ3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,52.73,4e-18,seg,NULL;
DUF3082,Protein of unknown function DUF3082,CUFF.4676.1
         (295 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g078540.1 | transmembrane protein, putative | HC | chr2:32...   288   5e-78
Medtr6g042030.1 | transmembrane protein, putative | HC | chr6:14...   178   5e-45

>Medtr2g078540.1 | transmembrane protein, putative | HC |
           chr2:32782761-32779136 | 20130731
          Length = 271

 Score =  288 bits (736), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 167/288 (57%), Positives = 201/288 (69%), Gaps = 32/288 (11%)

Query: 16  NLPISLPLTHH-----KPTLSSPFLY--KPTSSILHHXXXXXXXXXXXXXWTWLTHLAAE 68
           +LPI L LTH+     KP+L  PFL+  KPTSS                       ++  
Sbjct: 8   HLPIPLLLTHNHNHLFKPSLL-PFLHTTKPTSSF---------------------SISVI 45

Query: 69  LSTSIDLDAEGEGPIEIPFPSTPSIFDATDDPSPIQVASSVLLTGAISVFLFRSLRRRAK 128
            S S    +  +GPIEIP+ STPS+  +TDDPS IQ+A+S+LLTGAISV LFRS RRRAK
Sbjct: 46  PSLSTSSSSLTDGPIEIPYDSTPSLLSSTDDPSFIQIAASLLLTGAISVLLFRSFRRRAK 105

Query: 129 RVKESQFRSSGVVKKSIQEEALDSLKALGSASIDA-KGPPSPFQTFXXXXXXXXXXXXFY 187
           R+K++QFRSSG  +KS++EEAL++LKA+G+ASI+  KGPPSP QTF             Y
Sbjct: 106 RLKQTQFRSSG--EKSVKEEALETLKAMGTASIETTKGPPSPVQTFLGAISAGVISLILY 163

Query: 188 KFATTIEASLNKQTISDNFSVRQITIAIRTFVNGLTYLATFIFGLNSLGLFLYSGQLAIK 247
           KFAT IEA L++QTISD+FS RQITI +RT +NGLTYLATFIFGLNSLGL LYSGQLA+K
Sbjct: 164 KFATIIEAGLSRQTISDDFSARQITITVRTIINGLTYLATFIFGLNSLGLLLYSGQLALK 223

Query: 248 SIAGGSTEKETESKSVDQSSLSNSLDESPANNTELSSRKEEQSSNDAQ 295
           S  G S EKETE+KS DQSSLSN   E+  N+ ELS R EEQSSNDAQ
Sbjct: 224 SFTGDSIEKETENKSADQSSLSNLSVETRINDAELSGRNEEQSSNDAQ 271


>Medtr6g042030.1 | transmembrane protein, putative | HC |
           chr6:14513504-14510411 | 20130731
          Length = 254

 Score =  178 bits (452), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 120/285 (42%), Positives = 156/285 (54%), Gaps = 35/285 (12%)

Query: 1   MLQSQFXXXXXXLFSNLPISLPLTHHKPTLSSPFLYKPTSSILH--HXXXXXXXXXXXXX 58
           ML S        LF+NLPISL  THH    SSP       S LH  H             
Sbjct: 1   MLHSHLHHNHQFLFTNLPISLT-THH---FSSP-------SPLHKFHHNSHTIYAINPSQ 49

Query: 59  WTWLTHLAAELSTSIDLDAEGEGPIEIPFPSTPSIFDATDDPSPIQVASSVLLTGAISVF 118
             +L  L   ++  ++L                 IFDA D+ S  QV  SV+L+ AI+VF
Sbjct: 50  EVFLPLLNKLITAKVELSP---------------IFDAIDESSSNQVTISVVLSVAIAVF 94

Query: 119 LFRSLRRRAKRVKESQFRSSGVVKKSIQEEALDSLKAL-GSASIDAKGPPSPFQTFXXXX 177
           LF +++RR KR K+ ++RSSGV K S     L+S K L GS    +K PPSP +      
Sbjct: 95  LFPTIQRRIKRAKQLKYRSSGVKKSS-----LNSTKGLMGSTRKKSKNPPSPDKALLGAV 149

Query: 178 XXXXXXXXFYKFATTIEASLNKQTISDNFSVRQITIAIRTFVNGLTYLATFIFGLNSLGL 237
                    Y+F TTIEASL +QTISDNFSVRQITI IRT +NGL YLATF++G+NS GL
Sbjct: 150 MAGVIAVILYRFTTTIEASLYRQTISDNFSVRQITITIRTVINGLCYLATFVYGINSFGL 209

Query: 238 FLYSGQLAIKSIAGGSTE-KETESKSVDQSSLSNSLDESPANNTE 281
            LYSGQLA+ +   GS+  K+ ESK ++    SN  ++  +NN++
Sbjct: 210 LLYSGQLALNTYEKGSSSGKKIESKIMENHINSNKNEDQSSNNSQ 254