Miyakogusa Predicted Gene

Lj0g3v0087429.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087429.1 Non Characterized Hit- tr|H9JSM0|H9JSM0_BOMMO
Uncharacterized protein OS=Bombyx mori PE=4 SV=1,31.65,2e-18,Mad3/BUB1
hoMad3/BUB1 homology region,Mad3/BUB1 homology region 1;
coiled-coil,NULL; Mad3_BUB1_I,Mad,CUFF.4663.1
         (522 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g071460.1 | Mad3/BUB1 hoMad3/BUB1-like region protein | HC...   645   0.0  
Medtr1g035090.1 | inactive Serine/Threonine-kinase BUB1-like pro...   102   1e-21
Medtr4g078555.1 | mitotic checkpoint Serine/Threonine-kinase BUB...    70   4e-12

>Medtr3g071460.1 | Mad3/BUB1 hoMad3/BUB1-like region protein | HC |
           chr3:32060425-32063164 | 20130731
          Length = 506

 Score =  645 bits (1663), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/567 (60%), Positives = 389/567 (68%), Gaps = 106/567 (18%)

Query: 1   MANFEELLSSLNSDINSYTGKDPLLPWLRGIRKMKDTLPPQTLNEKLPDFLQKCARIFEL 60
           MAN +ELLSS  SDINSYTGKDPLLPWLRGI+KMKDTLP +TL EKLP+FLQ+CA+ FEL
Sbjct: 1   MANVDELLSSSFSDINSYTGKDPLLPWLRGIKKMKDTLPSKTLKEKLPEFLQQCAKTFEL 60

Query: 61  DRRYRNDMRYLRVWLHLMDFVDDPGALLKTMEVNHIGTKRCQFYQAYALYHEKSKRYDEA 120
           DRRYRND+RYLRVWLHLMDFVDDP ALL+TMEVN IGTKRCQFYQAYALY+EKSK YDEA
Sbjct: 61  DRRYRNDLRYLRVWLHLMDFVDDPSALLRTMEVNQIGTKRCQFYQAYALYYEKSKNYDEA 120

Query: 121 EKMYHLGVKNLAEPLDELQKSYDQFLQRMKRKNNKRVQHKEVRSSRRPLSTKGIPPFDNK 180
           EKMYH+GVKNLAEP+DELQKSY+QFLQRMKRK  K++Q                      
Sbjct: 121 EKMYHMGVKNLAEPVDELQKSYEQFLQRMKRK--KKIQ---------------------- 156

Query: 181 TGECSVGGAQTGRQVASSVIEDVADDRRVKTRKSEGKRFHGDDTVVVKKFVGTAMDGKSE 240
                               E  A DRRVK +  E K+  GD TVV+ KFV TAMDGKSE
Sbjct: 157 --------------------EMKAADRRVKAKNDESKKLRGDHTVVINKFVDTAMDGKSE 196

Query: 241 VEDACHHGLVDPTINMKEARNAINSMFREPLETVPLARKSHKKHAKESRSTKNDFKVFVD 300
            E+ACHHGLVDPTINMKEA NAINSMF EPLETVPL +K HK ++KE+ S+ N F+VFVD
Sbjct: 197 AENACHHGLVDPTINMKEAMNAINSMFSEPLETVPLGKKLHKNNSKENCSSMN-FEVFVD 255

Query: 301 ENMDYGIKPSGSLSLQQRTGASQAHQEPLQIYIDDEGCSENNDVNMXXXXXXXXXXXKLN 360
           EN+D   KPSGS SLQ R    +  QE LQI+IDDEG SE +  ++           K+N
Sbjct: 256 ENLDKENKPSGSASLQHRNEGGKPQQESLQIHIDDEGHSEGSTSSVS----------KVN 305

Query: 361 GFVFPPPKDLLSEKSSDMEAVSSRNPRLFREDTIVGRFVGSAILDEPKVENVCHHGLVEP 420
           GFVFP PKD+ SEKS DM+A  S N + FREDT+V RFVGSAILDEPKVEN CHHGLV+P
Sbjct: 306 GFVFPRPKDVPSEKSRDMDAQKSHNSK-FREDTVVRRFVGSAILDEPKVENACHHGLVDP 364

Query: 421 TINMKEAMNDINGMFVKPMDFVRRKRSMKQEKGPESHSGKEFG----------------- 463
           TINMKEAM+DIN MF KP+DFVR+KRS+KQE  PE++SGKEFG                 
Sbjct: 365 TINMKEAMDDINNMFGKPIDFVRKKRSLKQENAPENNSGKEFGGFSILADDDDDLKQKQG 424

Query: 464 ----------------------------GFSILADDDLEHRQGXXXXXXXXXXXXRMSKE 495
                                       GFSILADDDLE +Q               SKE
Sbjct: 425 GKPIDFVRKKRLMKQEKAPGNNSGKELSGFSILADDDLEQKQRPPLPKSRGK-----SKE 479

Query: 496 SDLFEPTLHTKEAKDDINKMFSMPLDF 522
           SDLFEPTLHTKEA DDIN MF+MPLDF
Sbjct: 480 SDLFEPTLHTKEAMDDINMMFNMPLDF 506


>Medtr1g035090.1 | inactive Serine/Threonine-kinase BUB1-like
           protein, putative | HC | chr1:12656005-12651869 |
           20130731
          Length = 390

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/134 (33%), Positives = 76/134 (56%)

Query: 15  INSYTGKDPLLPWLRGIRKMKDTLPPQTLNEKLPDFLQKCARIFELDRRYRNDMRYLRVW 74
           I+ Y G+DPLLPWL  ++ +++  PP   +  L    ++C R F    RY+ D+RYL+VW
Sbjct: 72  IDDYKGEDPLLPWLECMKWVQEAFPPGGDSSGLVVIYEQCVRAFWHSERYKEDLRYLKVW 131

Query: 75  LHLMDFVDDPGALLKTMEVNHIGTKRCQFYQAYALYHEKSKRYDEAEKMYHLGVKNLAEP 134
           L   +   D   +   ++ N IG     FY +YAL+ E   ++  A + + LG+   A+P
Sbjct: 132 LEYAENCFDKEVIYSFLDANEIGKTHSDFYISYALHLESKNKFKAANQTFELGINRNAQP 191

Query: 135 LDELQKSYDQFLQR 148
           +++L+ +Y +FL R
Sbjct: 192 IEKLKAAYRKFLVR 205


>Medtr4g078555.1 | mitotic checkpoint Serine/Threonine-kinase
           BUB1-like protein | HC | chr4:30356110-30349280 |
           20130731
          Length = 561

 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 3/155 (1%)

Query: 28  LRGIRK-MKDTLPPQTLNEKLPDFLQKCARIFELDRRYRNDMRYLRVWLHLMDFVDDPGA 86
            R I+K ++D+    T N  L   L+ C   F+ +  YRND R+L++W   MD   D  +
Sbjct: 56  FRSIKKALEDSTTSSTQN--LSKLLRDCINKFKNNHSYRNDPRFLKIWFLYMDVSADFDS 113

Query: 87  LLKTMEVNHIGTKRCQFYQAYALYHEKSKRYDEAEKMYHLGVKNLAEPLDELQKSYDQFL 146
           + K M  ++I       Y   A + E   R  +A+ +Y LG+   AEP+  L+K++  FL
Sbjct: 114 VFKGMLNSNICANDASLYVYSACFFEAKGRLLDADTIYKLGISKNAEPIKWLEKAHTLFL 173

Query: 147 QRMKRKNNKRVQHKEVRSSRRPLSTKGIPPFDNKT 181
            R+    N     K        L    I P+D  T
Sbjct: 174 SRVSEICNVASSQKVDYKESATLENNDINPWDAST 208