Miyakogusa Predicted Gene

Lj0g3v0087339.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087339.1 Non Characterized Hit- tr|I1IR56|I1IR56_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,31.68,3e-19,no
description,NULL; UBX,UBX; SUBFAMILY NOT NAMED,NULL; FAS-ASSOCIATED
PROTEIN,NULL; coiled-coil,NUL,CUFF.4662.1
         (191 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077740.1 | FAS-associated factor 2-B-like protein | HC | ...   195   2e-50
Medtr4g105430.1 | FAS-associated factor 2-B-like protein | HC | ...    95   5e-20
Medtr4g102810.1 | Ara4-interacting protein | HC | chr4:42612859-...    59   3e-09
Medtr8g432670.1 | Ara4-interacting protein | HC | chr8:12392209-...    58   5e-09

>Medtr1g077740.1 | FAS-associated factor 2-B-like protein | HC |
           chr1:34722081-34728616 | 20130731
          Length = 467

 Score =  195 bits (496), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 106/191 (55%), Positives = 115/191 (60%)

Query: 1   MIAMLQRVLEESSPTLVAARLDAXXXXXXXXXXXXQDAAYXXXXXXXXXXXXXXXXXXXX 60
           M+  LQRVLEESSP LVAARLDA            QDAAY                    
Sbjct: 276 MLVTLQRVLEESSPVLVAARLDAEERRTNARLREEQDAAYRAALEADQARERQRREEEER 335

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRQQKAESLGEEPAKGPNVTQVLVR 120
                                              +R++KA+SLGEEP KGPNVTQVLVR
Sbjct: 336 LAREAVEAERKLKEEEEARERAAQEAAEKQAALAKLREEKAQSLGEEPEKGPNVTQVLVR 395

Query: 121 FPTGERKERRFNNTVTIQSVYDYVDSLGCLEADSYSLVSNFPRVVYGQEKLTLSLKEAGL 180
           FP G RKERRFN+TVTIQS+YDYVDSLGCLE ++YSLVSNFPRVVYGQEKL LSLKEAGL
Sbjct: 396 FPNGVRKERRFNSTVTIQSLYDYVDSLGCLEVENYSLVSNFPRVVYGQEKLALSLKEAGL 455

Query: 181 HPQASLFVELS 191
           HPQASLFVEL 
Sbjct: 456 HPQASLFVELG 466


>Medtr4g105430.1 | FAS-associated factor 2-B-like protein | HC |
           chr4:43746722-43748994 | 20130731
          Length = 372

 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 7/94 (7%)

Query: 103 SLGEEPAKG-------PNVTQVLVRFPTGERKERRFNNTVTIQSVYDYVDSLGCLEADSY 155
           S GE+  KG         V Q+L+RFP GER+E  F  T  IQS++ Y+DSLG    ++Y
Sbjct: 277 STGEKNGKGITSSGNATQVAQILIRFPNGERREHTFLCTDKIQSIFSYIDSLGLSGIENY 336

Query: 156 SLVSNFPRVVYGQEKLTLSLKEAGLHPQASLFVE 189
            L+SNFPR VYG +++ ++LK+ GL+P+ASLF+E
Sbjct: 337 RLISNFPRRVYGVDQMRMTLKDVGLYPKASLFLE 370


>Medtr4g102810.1 | Ara4-interacting protein | HC |
           chr4:42612859-42608514 | 20130731
          Length = 580

 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 2/93 (2%)

Query: 100 KAESLGEEPAKGP-NVTQVLVRFPTGERKERRFNNTVTIQSVYDYVDSLGCLEADSYSLV 158
           K  SL  EP+    N   ++V+ P G R+ RRF  +  +QS++D++D    ++  SY LV
Sbjct: 487 KEVSLPPEPSSDDDNAVNLMVKMPDGSRRGRRFLRSHKLQSLFDFIDIGRQVKPSSYRLV 546

Query: 159 SNFPRVVYGQEKLTLSLKEAGL-HPQASLFVEL 190
             +PR  +G E+  ++L E GL + Q +LF+EL
Sbjct: 547 RPYPRRAFGVEESAVTLDELGLTNKQEALFLEL 579


>Medtr8g432670.1 | Ara4-interacting protein | HC |
           chr8:12392209-12398954 | 20130731
          Length = 500

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)

Query: 104 LGEEPAKGPNVTQVLVRFPTGERKERRFNNTVTIQSVYDYVDSLGCLEADSYSLVSNFPR 163
           LG+E A       ++VR P G R ERRF  T  +Q ++D++D  G ++  +Y +V ++PR
Sbjct: 417 LGDEKA-----ITIVVRMPDGGRCERRFFKTDKLQLLFDFIDIYGAVKPGTYRVVRSYPR 471

Query: 164 VVYGQEKLTLSLKEAGL-HPQASLFVEL 190
             Y     + +L EAGL +   +LF+EL
Sbjct: 472 RAYSVNDRSATLNEAGLSNKNEALFLEL 499