Miyakogusa Predicted Gene

Lj0g3v0087139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0087139.1 Non Characterized Hit- tr|K4D8X3|K4D8X3_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,66.1,0.000000000004,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.4645.1
         (390 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g098340.1 | hypothetical protein | HC | chr2:42041150-4204...   679   0.0  
Medtr4g065980.1 | hypothetical protein | HC | chr4:24849232-2484...   605   e-173
Medtr3g104820.1 | hypothetical protein | HC | chr3:48317619-4831...   148   7e-36

>Medtr2g098340.1 | hypothetical protein | HC |
           chr2:42041150-42045089 | 20130731
          Length = 482

 Score =  679 bits (1752), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/395 (83%), Positives = 355/395 (89%), Gaps = 5/395 (1%)

Query: 1   MVRVRRGPDELAELQACIVPNDSGGKKQLVLRSISDPNYVVGLVDRYEAECFELQASRST 60
           M+RVRRG DELAELQACIVPND+ GKKQ VLRSI DPNYVVG +DR E ECFE+QASRS+
Sbjct: 88  MIRVRRGSDELAELQACIVPNDASGKKQFVLRSIDDPNYVVGFLDRTEVECFEIQASRSS 147

Query: 61  RMVNELTRTKLQDGYVSYPWERRMQEMLPVPNSSNFLSILLLPKASDRVASKYNDLEDTL 120
           RMVN LTRTKLQDGYVSYPWERRMQEML VPNSSNFLSILLLPKASDRVAS+YNDLEDTL
Sbjct: 148 RMVNALTRTKLQDGYVSYPWERRMQEMLTVPNSSNFLSILLLPKASDRVASRYNDLEDTL 207

Query: 121 ARANAWLNAGQASGVPVVFMNIQTESLLTKISGETASSTVNAGSLSDLSNVANVSLYGFE 180
           ARANAW+NAGQASGVP+VFMNIQTESLLTKISGETAS+TVNAGSLSDLSN+ANVSLYGFE
Sbjct: 208 ARANAWINAGQASGVPIVFMNIQTESLLTKISGETASATVNAGSLSDLSNLANVSLYGFE 267

Query: 181 DYHGIDIGVVRAVRLWYAPVGGELSVEIKLREEDTKLGFAISRTEEGFIFISSVMHQENG 240
           DYHGIDIGVVRAVRLWYAPVGGELS+EIKL+EED+KLGFAISRTEEGFIFISSV++QEN 
Sbjct: 268 DYHGIDIGVVRAVRLWYAPVGGELSIEIKLKEEDSKLGFAISRTEEGFIFISSVINQENV 327

Query: 241 PATRSGLSDLYKLATDTSRLLVVSRVSNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHT 300
           PATRSGLS LYKLATDT RLLVVSRVSNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHT
Sbjct: 328 PATRSGLSSLYKLATDTCRLLVVSRVSNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHT 387

Query: 301 RVPIHLHVFLWDRALATSSGSSNRFRAXX-XXXXXXXXEVQVARHQDENQVLPLPSEASE 359
           RVPI LHVFLWDR++  SSG SNRFRA           EVQ+ R  +E   LPLP EAS+
Sbjct: 388 RVPILLHVFLWDRSMVNSSGGSNRFRALSPSALQPLPSEVQIGRFSNETHTLPLPPEASD 447

Query: 360 PSDL----SRLRLQRDTAGEASFRFHDFALSSNWV 390
           P+D+    S+ R +RDTAGE+SFRFHDF+LSSNWV
Sbjct: 448 PTDITSEVSQSRFERDTAGESSFRFHDFSLSSNWV 482


>Medtr4g065980.1 | hypothetical protein | HC |
           chr4:24849232-24844548 | 20130731
          Length = 489

 Score =  605 bits (1560), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 296/400 (74%), Positives = 339/400 (84%), Gaps = 12/400 (3%)

Query: 1   MVRVRRGPDELAELQACIVPNDSGGKKQLVLRSISDPNYVVGLVDRYEAECFELQASRST 60
           +VRVRRG DE AELQ CIVPN++  KK  VLR I DPNY+VG +DR EAECF+LQASRS+
Sbjct: 92  LVRVRRGVDEFAELQGCIVPNEN--KKSYVLRDIVDPNYLVGFLDRTEAECFQLQASRSS 149

Query: 61  RMVNELTRTKLQDGYVSYPWERRMQEMLPVPNSSNFLSILLLPKASDRVASKYNDLEDTL 120
           RMVNELT+T++QDG+VSYPWERRMQE+L VPNSSNFLSILLLPKASDRVAS+YND+EDTL
Sbjct: 150 RMVNELTKTRIQDGFVSYPWERRMQELLSVPNSSNFLSILLLPKASDRVASRYNDVEDTL 209

Query: 121 ARANAWLNAGQASGVPVVFMNIQTESLLTKISGETASSTVNAGSLSDLSNVANVSLYGFE 180
           ARANAWLNA QASGVP+VFMNIQTESLLTKISGETASSTVNAGSLSDL N+AN SLYGFE
Sbjct: 210 ARANAWLNAAQASGVPIVFMNIQTESLLTKISGETASSTVNAGSLSDLCNIANASLYGFE 269

Query: 181 DYHGIDIGVVRAVRLWYAPVGGELSVEIKLREEDTKLGFAISRTEEGFIFISSVM---HQ 237
           DYHG+DIGVVRA+RLWYAP+GGE S+EIKLREEDTKLGFAISRTEEGFIFISS +    +
Sbjct: 270 DYHGVDIGVVRAIRLWYAPMGGEFSIEIKLREEDTKLGFAISRTEEGFIFISSSVIDEGK 329

Query: 238 ENGPATRSGLSDLYKLATDTSRLLVVSRVSNQKVLPWMVSSTGAIRCYDTVSLSQKLSLH 297
           E+ PATRSGLS+LYKLAT+TSRLLVVSR+SNQ+VLPWMVSSTGAIRCYDTVSLSQKLSLH
Sbjct: 330 ESLPATRSGLSNLYKLATETSRLLVVSRLSNQRVLPWMVSSTGAIRCYDTVSLSQKLSLH 389

Query: 298 RHTRVPIHLHVFLWDRALATSSGSSNRFRAXXXXXXXXXXEVQVARHQDENQVLPLPSEA 357
           RHT+VPI LHVFLWDR +ATSS  S + +           ++Q+A   +ENQ+ PL  E 
Sbjct: 390 RHTKVPILLHVFLWDRTMATSSAESTKSKPLSSSVLPSPPQIQLAHRPNENQIQPLSCEG 449

Query: 358 SEPSDLS------RLRLQRDTAGEASFRFHDFALSS-NWV 390
           S+PSD++         L+R   G+ SFRF DF+LSS NW+
Sbjct: 450 SDPSDINISDSSQPTHLERGAVGDVSFRFQDFSLSSTNWI 489


>Medtr3g104820.1 | hypothetical protein | HC |
           chr3:48317619-48315579 | 20130731
          Length = 393

 Score =  148 bits (374), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 154/311 (49%), Gaps = 21/311 (6%)

Query: 2   VRVRRGPDELAELQACIVPND-SGGKKQLVLRSISDPNYVVGLVDRYEAECFELQASRST 60
           ++VRRG D L +LQ CIV    S  +++  +++ +D  ++  L D    +C ELQ    T
Sbjct: 73  IQVRRG-DGLLKLQTCIVQQKVSVLRRKYTIQATTDHRHIADLADLTLKQCIELQVM--T 129

Query: 61  RMVNELTRTKLQDGYVSYPWERRMQEMLPVPNSSNFLSILLLPKASDRVASKYNDLEDTL 120
           R V  +   +  +  + Y W+ ++   LP  +SS   SIL +P  S+      N +  T 
Sbjct: 130 RRVMHIQARRFHEDAIKYDWKMKVGSYLPHQSSSVVSSILFMPLVSE------NCINTTT 183

Query: 121 ARANAWLNAGQASGVPVVFMNIQTESLLTKISGETASSTVNAGSLSDLSNVANVSLYGFE 180
           AR   W +A  +SGVP+VF+N+QTE + T +      +T      S LS+   +      
Sbjct: 184 ARCMTWFSAAISSGVPLVFVNVQTELIPTTLVYNLNLTTTQTQEKSSLSSNQQIHFTN-- 241

Query: 181 DYHGIDIGVVRAVRLWYAPVGGELSVEIKLREEDTKLGFAISRTEEGFIFISSVMHQENG 240
                   ++  +RLW+ P   E+ +E+  + ++ + G  I RTEEGF+ I SVM  ++ 
Sbjct: 242 -------QIIHGIRLWFLPGLEEIPIELIPQPDEARFGMEIKRTEEGFVCIYSVM--KDT 292

Query: 241 PATRSGLSDLYKLATDTSRLLVVSRVSNQKVLPWMVSSTGAIRCYDTVSLSQKLSLHRHT 300
            A R GL +L++ AT    LLV+SR+ ++  +P  V S G + C D   +   L      
Sbjct: 293 SADRGGLRELHEEATANGFLLVISRLDDKNTIPTSVCSDGLVHCCDHAEIKDLLISAIDQ 352

Query: 301 RVPIHLHVFLW 311
              I LHV  W
Sbjct: 353 YETIQLHVMAW 363