Miyakogusa Predicted Gene
- Lj0g3v0087079.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0087079.1 tr|B7FMP7|B7FMP7_MEDTR Auxin-induced protein
OS=Medicago truncatula GN=MTR_1g070830 PE=2 SV=1,79.29,0,seg,NULL;
IAA_ARF,Aux/IAA-ARF-dimerisation; FAMILY NOT NAMED,NULL;
AUX_IAA,AUX/IAA protein; CAD & PB,CUFF.4745.1
(189 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |... 299 8e-82
Medtr1g040675.1 | auxin response factor | HC | chr1:15063378-150... 244 3e-65
Medtr1g076270.1 | auxin response factor | HC | chr1:33944737-339... 230 5e-61
Medtr1g093350.1 | auxin response factor | HC | chr1:33849453-338... 230 5e-61
Medtr1g040675.2 | auxin response factor | HC | chr1:15063472-150... 206 1e-53
Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |... 172 1e-43
Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |... 170 6e-43
Medtr6g488150.1 | auxin response factor | HC | chr6:33216291-332... 168 2e-42
Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |... 167 4e-42
Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |... 167 5e-42
Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |... 166 2e-41
Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |... 165 2e-41
Medtr5g067350.1 | auxin response factor | HC | chr5:28450190-284... 164 3e-41
Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |... 164 5e-41
Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |... 161 4e-40
Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |... 160 7e-40
Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |... 160 7e-40
Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |... 153 9e-38
Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |... 143 1e-34
Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |... 132 2e-31
Medtr1g069495.1 | auxin response factor | HC | chr1:30104004-300... 110 6e-25
Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568... 105 3e-23
Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568... 105 3e-23
Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |... 103 7e-23
Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |... 100 2e-21
Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |... 100 2e-21
Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |... 100 2e-21
Medtr6g488150.2 | auxin response factor | HC | chr6:33216341-332... 99 2e-21
Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |... 99 2e-21
Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |... 95 4e-20
Medtr5g067350.2 | auxin response factor | HC | chr5:28450190-284... 94 9e-20
Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |... 86 2e-17
Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |... 84 7e-17
Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |... 77 9e-15
Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |... 71 7e-13
Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |... 66 2e-11
Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |... 57 8e-09
Medtr1g024025.1 | auxin response factor 2 | LC | chr1:7778460-77... 57 1e-08
Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |... 55 5e-08
Medtr4g124900.1 | auxin response factor 2 | HC | chr4:51795315-5... 49 2e-06
Medtr4g124900.2 | auxin response factor 2 | HC | chr4:51795315-5... 49 2e-06
Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-1033... 49 4e-06
Medtr4g021580.1 | auxin response factor 2 | HC | chr4:7078271-70... 48 6e-06
>Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:31369872-31371491 | 20130731
Length = 204
Score = 299 bits (766), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 147/198 (74%), Positives = 163/198 (82%), Gaps = 11/198 (5%)
Query: 3 NYETEMNLKATELRLGLPGRDELEN-----AVVRCNKRSSPE------AXXXXXXXXXXX 51
N++TEMNLKATELRLGLPG DE+E +V+R NKRSSPE +
Sbjct: 7 NHQTEMNLKATELRLGLPGSDEVEKLPCNFSVLRNNKRSSPEEASDVDSISKSKLNSSNG 66
Query: 52 XXXITSDDKDSAPPAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDL 111
T+DD+D+APP+KAQVVGWPP+RS+RKNS+QQKKGE GMY+KVSMAGAPYLRKIDL
Sbjct: 67 SSHTTNDDQDNAPPSKAQVVGWPPIRSYRKNSLQQKKGEEVGMYLKVSMAGAPYLRKIDL 126
Query: 112 KVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSS 171
KVYKSY ELLK LENMFKCT GEYSEREGYNGSE+VPTYEDKDGDWMLVGDVPW+MFMSS
Sbjct: 127 KVYKSYSELLKVLENMFKCTIGEYSEREGYNGSEFVPTYEDKDGDWMLVGDVPWEMFMSS 186
Query: 172 CKRLRIMKGSEAKGLGYF 189
CKRLRIMKGSEAKGLG F
Sbjct: 187 CKRLRIMKGSEAKGLGCF 204
>Medtr1g040675.1 | auxin response factor | HC |
chr1:15063378-15065770 | 20130731
Length = 186
Score = 244 bits (623), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 138/185 (74%), Gaps = 7/185 (3%)
Query: 8 MNLKATELRLGLPGRDE-----LENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSDDKDS 62
M KATELRLGLPG DE + +VV+ NKR P+ + +
Sbjct: 1 MEFKATELRLGLPGTDEKDMKTIHGSVVKNNKRQLPQTSEESVSISKVSNDDQHVESSSA 60
Query: 63 APPAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLK 122
APPAKA++VGWPP+RS+RKN++Q+ E G+YVKVSM GAPYLRKIDL++Y YPELLK
Sbjct: 61 APPAKAKIVGWPPIRSYRKNTLQE--AEVGGIYVKVSMDGAPYLRKIDLRIYGGYPELLK 118
Query: 123 ALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSE 182
ALE MFK T GEYSEREGY GSEY PTYEDKDGDWMLVGDVPWDMF++SCKRLRIMKG+E
Sbjct: 119 ALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTE 178
Query: 183 AKGLG 187
A+GLG
Sbjct: 179 ARGLG 183
>Medtr1g076270.1 | auxin response factor | HC |
chr1:33944737-33945503 | 20130731
Length = 178
Score = 230 bits (587), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 144/190 (75%), Gaps = 16/190 (8%)
Query: 1 MEN---YETEMNLKATELRLGLPGRDELENAVVRC-NKRSSPEAXXXXXXXXXXXXXXIT 56
MEN YE ++N+KATELRLGLPG ++ E + NKR E T
Sbjct: 1 MENKVAYENDLNMKATELRLGLPGTEQNEEQKAKISNKRPLTETSKDSGSK--------T 52
Query: 57 SDDKDSAPPAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKS 116
SDD +APP+KA++VGWPP+RS+RKNS+Q+ E +G+YVKVS+ GAPYLRKIDL+VY
Sbjct: 53 SDD--AAPPSKAKIVGWPPIRSYRKNSLQE--AEASGIYVKVSLDGAPYLRKIDLRVYGG 108
Query: 117 YPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLR 176
Y +LLKALE+MFK T G YSE+EGY GSEY PTYEDKDGDWMLVGDVPW+MF++SCKRLR
Sbjct: 109 YAQLLKALESMFKLTIGNYSEKEGYKGSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLR 168
Query: 177 IMKGSEAKGL 186
IMKG+EA+G+
Sbjct: 169 IMKGTEARGV 178
>Medtr1g093350.1 | auxin response factor | HC |
chr1:33849453-33847986 | 20130731
Length = 178
Score = 230 bits (587), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 117/190 (61%), Positives = 144/190 (75%), Gaps = 16/190 (8%)
Query: 1 MEN---YETEMNLKATELRLGLPGRDELENAVVRC-NKRSSPEAXXXXXXXXXXXXXXIT 56
MEN YE ++N+KATELRLGLPG ++ E + NKR E T
Sbjct: 1 MENKVAYENDLNMKATELRLGLPGTEQNEEQKAKISNKRPLTETSKDSGSK--------T 52
Query: 57 SDDKDSAPPAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKS 116
SDD +APP+KA++VGWPP+RS+RKNS+Q+ E +G+YVKVS+ GAPYLRKIDL+VY
Sbjct: 53 SDD--AAPPSKAKIVGWPPIRSYRKNSLQE--AEASGIYVKVSLDGAPYLRKIDLRVYGG 108
Query: 117 YPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLR 176
Y +LLKALE+MFK T G YSE+EGY GSEY PTYEDKDGDWMLVGDVPW+MF++SCKRLR
Sbjct: 109 YAQLLKALESMFKLTIGNYSEKEGYKGSEYEPTYEDKDGDWMLVGDVPWEMFVTSCKRLR 168
Query: 177 IMKGSEAKGL 186
IMKG+EA+G+
Sbjct: 169 IMKGTEARGV 178
>Medtr1g040675.2 | auxin response factor | HC |
chr1:15063472-15065737 | 20130731
Length = 162
Score = 206 bits (523), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 117/164 (71%), Gaps = 7/164 (4%)
Query: 8 MNLKATELRLGLPGRDE-----LENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSDDKDS 62
M KATELRLGLPG DE + +VV+ NKR P+ + +
Sbjct: 1 MEFKATELRLGLPGTDEKDMKTIHGSVVKNNKRQLPQTSEESVSISKVSNDDQHVESSSA 60
Query: 63 APPAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLK 122
APPAKA++VGWPP+RS+RKN++Q+ E G+YVKVSM GAPYLRKIDL++Y YPELLK
Sbjct: 61 APPAKAKIVGWPPIRSYRKNTLQE--AEVGGIYVKVSMDGAPYLRKIDLRIYGGYPELLK 118
Query: 123 ALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWD 166
ALE MFK T GEYSEREGY GSEY PTYEDKDGDWMLVGDVPW+
Sbjct: 119 ALETMFKLTIGEYSEREGYKGSEYAPTYEDKDGDWMLVGDVPWE 162
>Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:35977175-35973245 | 20130731
Length = 243
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 124/228 (54%), Gaps = 48/228 (21%)
Query: 8 MNLKATELRLGLPGRDELENAVVR--CNKRSSPEAXXXXXXXXXX--------------- 50
+N + TELRLGLPG + + V+ C KR E
Sbjct: 15 INFEETELRLGLPGAGDHGESPVKNSCGKRGFSETANVDLKLNLSPINDSASSSSTIASV 74
Query: 51 ---XXXXITSDDKDSAPP-AKAQVVGWPPVRSFRKN--SMQQKK------------GEGA 92
T+ S PP AKAQVVGWPPVRSFRKN ++ QK G G
Sbjct: 75 AENKGKDTTTSATVSPPPRAKAQVVGWPPVRSFRKNIVNVHQKSNSETEVDKSISGGGGN 134
Query: 93 GMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMF-------------KCTFGEYSERE 139
G +VKVSM GAPYLRK+DLK+YKSY EL AL MF K E +
Sbjct: 135 GAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQVTKDFMNESKLID 194
Query: 140 GYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
NGS+YVPTYEDKDGDWMLVGDVPW+MF+ SCKRLRIMKGSEA GLG
Sbjct: 195 LLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGLG 242
>Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:35977175-35973245 | 20130731
Length = 253
Score = 170 bits (431), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 108/228 (47%), Positives = 123/228 (53%), Gaps = 48/228 (21%)
Query: 8 MNLKATELRLGLPGRDELENAVVR--CNKRSSPEAXXXXXXXXXX--------------- 50
+N + TELRLGLPG + + V+ C KR E
Sbjct: 15 INFEETELRLGLPGAGDHGESPVKNSCGKRGFSETANVDLKLNLSPINDSASSSSTIASV 74
Query: 51 ---XXXXITSDDKDSAPP-AKAQVVGWPPVRSFRKN--SMQQKK------------GEGA 92
T+ S PP AKAQVVGWPPVRSFRKN ++ QK G G
Sbjct: 75 AENKGKDTTTSATVSPPPRAKAQVVGWPPVRSFRKNIVNVHQKSNSETEVDKSISGGGGN 134
Query: 93 GMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMF-------------KCTFGEYSERE 139
G +VKVSM GAPYLRK+DLK+YKSY EL AL MF K E +
Sbjct: 135 GAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQVTKDFMNESKLID 194
Query: 140 GYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
NGS+YVPTYEDKDGDWMLVGDVPW+MF+ SCKRLRIMKGSEA GL
Sbjct: 195 LLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMKGSEAIGLA 242
>Medtr6g488150.1 | auxin response factor | HC |
chr6:33216291-33219398 | 20130731
Length = 254
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 126/231 (54%), Gaps = 53/231 (22%)
Query: 8 MNLKATELRLGLPG-----RD----ELENAVVRC--------NKRSSPEAXXXXXXXXXX 50
+NLKATELRLGLPG RD E +NA C KR +A
Sbjct: 15 LNLKATELRLGLPGSESPERDNDLLEEKNAYSLCMLNSLFSGAKRGFSDAIDMRKSSNQQ 74
Query: 51 XXXXITSDDKD----------SAPPAKAQVVGWPPVRSFRKNSM--QQKKGEG------- 91
+ D + S AK QVVGWPP+RSFRKNSM Q +K +
Sbjct: 75 GS--VAKDQTNPLNEKKKSQISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDNDDVEAKS 132
Query: 92 AGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKC----------TFGEYSEREG- 140
+YVKVSM GAPYLRK+DLK++ +Y EL ALE MF C FG+ + E
Sbjct: 133 GCLYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISQFGSHGVFGQGNVCESR 192
Query: 141 ----YNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
+GSEYV TYEDKDGDWMLVGDVPW MF+ SCKRLRIMK SEA GL
Sbjct: 193 LMDLLHGSEYVLTYEDKDGDWMLVGDVPWKMFIDSCKRLRIMKSSEAIGLA 243
>Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903552-33900946 | 20130731
Length = 239
Score = 167 bits (424), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 120/219 (54%), Gaps = 40/219 (18%)
Query: 8 MNLKATELRLGLPGR--------DELENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSDD 59
+NLK TEL LGLPG E+E KR E S
Sbjct: 8 LNLKETELCLGLPGGGGGGGGGGSEVETPRA-SGKRGFSETVDLKLNLQTKEDLNEKSAS 66
Query: 60 KD-------SAPPAKAQVVGWPPVRSFRKNSMQQK-----------KGEGAGMYVKVSMA 101
K+ + PPAKAQVVGWPPVRS+RKN M QK A +VKVSM
Sbjct: 67 KEKTLLKDPAKPPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMD 126
Query: 102 GAPYLRKIDLKVYKSYPELLKALENMFKC-TFGEYSER------------EGYNGSEYVP 148
GAPYLRK+DL +YK+Y +L AL MF T G Y + + N SEYVP
Sbjct: 127 GAPYLRKVDLTMYKTYKDLSDALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSEYVP 186
Query: 149 TYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
TYEDKDGDWMLVGDVPW+MF+ SCKRLRIMKGSEA GLG
Sbjct: 187 TYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLG 225
>Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:31340838-31337022 | 20130731
Length = 245
Score = 167 bits (423), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 107/230 (46%), Positives = 121/230 (52%), Gaps = 52/230 (22%)
Query: 5 ETEMNLKATELRLGL--PGRDELENAVVRCNKRSSPEAXXXXXXXXXXXXXXITS----- 57
E +M TELRLGL PG+ VVR KR E +++
Sbjct: 10 EEKMVFDETELRLGLGLPGK---TTEVVR--KRGFSETESESETNTVDLKLNLSTKEGAT 64
Query: 58 -------------DDKDSAPPAKAQVVGWPPVRSFRKNSMQ-QKKGEGAG---------- 93
D + PPAKAQVVGWPPVRSFRKN QK EG+
Sbjct: 65 DPQFKPKEKALLLSDSGAKPPAKAQVVGWPPVRSFRKNMFAAQKSNEGSEESEKKNSNNN 124
Query: 94 --MYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREG----------- 140
+VKVSM GAPYLRK+DLK+YKSYPEL AL MF E +G
Sbjct: 125 PISFVKVSMDGAPYLRKVDLKMYKSYPELSDALAKMFNSFTTGNCESQGIKDFMNESNKL 184
Query: 141 ---YNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
N S+YVPTYEDKDGDWMLVGDVPW+MF+ SCKRLRIMKG EA GL
Sbjct: 185 MDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMKGKEAIGLA 234
>Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:43637105-43634220 | 20130731
Length = 326
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 103/155 (66%), Gaps = 25/155 (16%)
Query: 57 SDDKDSAPPAKAQVVGWPPVRSFRKNSMQ----------QKKGEGAGMYVKVSMAGAPYL 106
+++ +AP AKAQVVGWPP+RSFRKN+M + K E +YVKVSM GAPYL
Sbjct: 160 TNEHANAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPEFDCLYVKVSMDGAPYL 219
Query: 107 RKIDLKVYKSYPELLKALENMFKC-TFG--------------EYSEREGYNGSEYVPTYE 151
RK+DLK Y +Y EL ALE MF C T G E S R+ +GSEYV TYE
Sbjct: 220 RKVDLKTYNNYMELSSALEKMFTCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYE 279
Query: 152 DKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
DKDGDWMLVGDVPW MF SC+RLRIMKGS+A GL
Sbjct: 280 DKDGDWMLVGDVPWGMFADSCRRLRIMKGSDAIGL 314
>Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903552-33900363 | 20130731
Length = 236
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 119/219 (54%), Gaps = 40/219 (18%)
Query: 8 MNLKATELRLGLPGR--------DELENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSDD 59
+NLK TEL LGLPG E+E KR E S
Sbjct: 8 LNLKETELCLGLPGGGGGGGGGGSEVETPRA-SGKRGFSETVDLKLNLQTKEDLNEKSAS 66
Query: 60 KD-------SAPPAKAQVVGWPPVRSFRKNSMQQK-----------KGEGAGMYVKVSMA 101
K+ + PPAKAQVVGWPPVRS+RKN M QK A +VKVSM
Sbjct: 67 KEKTLLKDPAKPPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMD 126
Query: 102 GAPYLRKIDLKVYKSYPELLKALENMFKC-TFGEYSER------------EGYNGSEYVP 148
GAPYLRK+DL +YK+Y +L AL MF T G Y + + N SEYVP
Sbjct: 127 GAPYLRKVDLTMYKTYKDLSDALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSEYVP 186
Query: 149 TYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
TYEDKDGDWMLVGDVPW+MF+ SCKRLRIMKGSEA GL
Sbjct: 187 TYEDKDGDWMLVGDVPWEMFVGSCKRLRIMKGSEAIGLA 225
>Medtr5g067350.1 | auxin response factor | HC |
chr5:28450190-28454050 | 20130731
Length = 347
Score = 164 bits (416), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 100/148 (67%), Gaps = 22/148 (14%)
Query: 62 SAPPAKAQVVGWPPVRSFRKNSMQQ----------KKGEGAGMYVKVSMAGAPYLRKIDL 111
+AP +KAQVVGWPP+RSFRKNS+ K G G ++VKVSM GAPYLRK+DL
Sbjct: 189 TAPASKAQVVGWPPIRSFRKNSLTTASKNTEEVDGKLGSGGAVFVKVSMDGAPYLRKVDL 248
Query: 112 KVYKSYPELLKALENMFKC-TFG-----------EYSEREGYNGSEYVPTYEDKDGDWML 159
K Y +Y EL +LE MF C T G E R+ +GSEYV TYEDKDGDWML
Sbjct: 249 KNYTAYSELSSSLEKMFSCFTIGQCESHGNQMLNETKLRDLLHGSEYVITYEDKDGDWML 308
Query: 160 VGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
VGDVPW+MF+ +C+RLRIMK S+A GL
Sbjct: 309 VGDVPWEMFIDTCRRLRIMKSSDAIGLA 336
>Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |
chr8:28204029-28199991 | 20130731
Length = 356
Score = 164 bits (415), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/150 (56%), Positives = 98/150 (65%), Gaps = 24/150 (16%)
Query: 62 SAPPAKAQVVGWPPVRSFRKNSMQQK---------KGEGAGMYVKVSMAGAPYLRKIDLK 112
SAP AKAQVVGWPP+RSFRKNS+ K A ++VKVSM GAPYLRK+DL+
Sbjct: 196 SAPAAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGAAALFVKVSMDGAPYLRKVDLR 255
Query: 113 VYKSYPELLKALENMFKC-TFGEYSEREG--------------YNGSEYVPTYEDKDGDW 157
Y +Y EL LE MF C T G+ G +GSEYV TYEDKDGDW
Sbjct: 256 NYTTYQELSSDLEKMFSCFTLGQCGSHGGPGKEMLSESKLKDFLHGSEYVVTYEDKDGDW 315
Query: 158 MLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
MLVGDVPWDMF+ +CKRL+IMKGS+A GL
Sbjct: 316 MLVGDVPWDMFIDTCKRLKIMKGSDAIGLA 345
>Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |
chr8:43394828-43391289 | 20130731
Length = 293
Score = 161 bits (407), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/258 (43%), Positives = 126/258 (48%), Gaps = 79/258 (30%)
Query: 8 MNLKATELRLGLPGRD--ELENAVV----------------------------------- 30
+NLKATELRLGLPG + E EN V
Sbjct: 24 LNLKATELRLGLPGSESPERENGGVLKSLVSGAKRGFSDAITDGGSGKWVLSGNGGSEVG 83
Query: 31 ----------------RCNKRSSPEAXXXXXXXXXXXXXXITSDDKD--SAPPAKAQVVG 72
CN + +P + D+K S P +KAQVVG
Sbjct: 84 LCKDGNLFSPKAKGVGECNNQQNPFSASVVVKETVTHSPKPLHDNKPQVSPPSSKAQVVG 143
Query: 73 WPPVRSFRKNSM--QQKKGEGAG------MYVKVSMAGAPYLRKIDLKVYKSYPELLKAL 124
WPP+RSFRKNSM Q +K + +YVKVSM GAPYLRK+DL + SY EL AL
Sbjct: 144 WPPIRSFRKNSMVSQPQKNDADAEAKSECLYVKVSMEGAPYLRKVDLNGFSSYRELSSAL 203
Query: 125 ENMFKC----TFGEY--SEREG----------YNGSEYVPTYEDKDGDWMLVGDVPWDMF 168
E MF C G Y S RE +GSEYV TYEDKDGDWMLVGDVPW+MF
Sbjct: 204 EKMFSCFTISQCGSYGVSCREKNLSESRLVDLLHGSEYVLTYEDKDGDWMLVGDVPWEMF 263
Query: 169 MSSCKRLRIMKGSEAKGL 186
SCKRLRIMK SEA GL
Sbjct: 264 TESCKRLRIMKSSEAIGL 281
>Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |
chr5:13126019-13120497 | 20130731
Length = 335
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 98/150 (65%), Gaps = 25/150 (16%)
Query: 63 APPAKAQVVGWPPVRSFRKNSMQQKKGEG----------AGMYVKVSMAGAPYLRKIDLK 112
AP +KAQVVGWPP+RSFRKNSM A ++VKVSM GAPYLRK+DL+
Sbjct: 175 APASKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLR 234
Query: 113 VYKSYPELLKALENMFKC-TFGEYSE--------------REGYNGSEYVPTYEDKDGDW 157
Y +Y +L ALE MF C T G+ R+ +GSEYV TYEDKDGDW
Sbjct: 235 TYATYQQLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLLHGSEYVLTYEDKDGDW 294
Query: 158 MLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
MLVGDVPW+MF+ +C+RL+IMKGS+A GL
Sbjct: 295 MLVGDVPWEMFIDTCRRLKIMKGSDAIGLA 324
>Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |
chr5:13126144-13120365 | 20130731
Length = 335
Score = 160 bits (405), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/150 (54%), Positives = 98/150 (65%), Gaps = 25/150 (16%)
Query: 63 APPAKAQVVGWPPVRSFRKNSMQQKKGEG----------AGMYVKVSMAGAPYLRKIDLK 112
AP +KAQVVGWPP+RSFRKNSM A ++VKVSM GAPYLRK+DL+
Sbjct: 175 APASKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFVKVSMDGAPYLRKVDLR 234
Query: 113 VYKSYPELLKALENMFKC-TFGEYSE--------------REGYNGSEYVPTYEDKDGDW 157
Y +Y +L ALE MF C T G+ R+ +GSEYV TYEDKDGDW
Sbjct: 235 TYATYQQLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLLHGSEYVLTYEDKDGDW 294
Query: 158 MLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
MLVGDVPW+MF+ +C+RL+IMKGS+A GL
Sbjct: 295 MLVGDVPWEMFIDTCRRLKIMKGSDAIGLA 324
>Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |
chr7:38527122-38532646 | 20130731
Length = 250
Score = 153 bits (386), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 95/146 (65%), Gaps = 22/146 (15%)
Query: 64 PPAKAQVVGWPPVRSFRKNSMQQKKGE---------GAGMYVKVSMAGAPYLRKIDLKVY 114
PPAKAQVVGWPPVRS+RKN + +K E A +VKVSM GAPYLRK+DLK+Y
Sbjct: 94 PPAKAQVVGWPPVRSYRKNMLAMQKSESEKNSSSNFNAITFVKVSMDGAPYLRKVDLKMY 153
Query: 115 KSYPELLKALENMFKCTFGEYSEREG-------------YNGSEYVPTYEDKDGDWMLVG 161
SY +L +L MF E +G N S+YVPTYEDKDGDWMLVG
Sbjct: 154 TSYSQLSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNNSDYVPTYEDKDGDWMLVG 213
Query: 162 DVPWDMFMSSCKRLRIMKGSEAKGLG 187
DVPW+MF+ SCKRLRIMKG EA G+
Sbjct: 214 DVPWEMFVESCKRLRIMKGKEAIGIA 239
>Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:3041610-3037433 | 20130731
Length = 178
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 108/178 (60%), Gaps = 18/178 (10%)
Query: 10 LKATELRLGLPGRDELENAVVRCNKRSSPEAXXXXXXXXXXXXXXITSDDKDSAPPAKAQ 69
L+ TELRLGLP + +N KR E D K Q
Sbjct: 8 LEITELRLGLPCGEPQKNE----KKRMFSEIDGGEEE---------NGGSGDQKIEKKNQ 54
Query: 70 VVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFK 129
VVGWPPV S+RK +M EG+ MY+KVSM GAPYLRKIDL ++K Y EL ALE +F
Sbjct: 55 VVGWPPVCSYRKKNMN----EGSKMYMKVSMDGAPYLRKIDLGLHKGYLELALALEKLFG 110
Query: 130 CTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
C E + ++ N E+VP YEDKDGDWMLVGDVPW+MF+ SCKRLRIMK S+AKG G
Sbjct: 111 CCGIEEALKDADN-CEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKGFG 167
>Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |
chr1:33903407-33900363 | 20130731
Length = 204
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 82/132 (62%), Gaps = 25/132 (18%)
Query: 60 KDSA-PPAKAQVVGWPPVRSFRKNSMQQK-----------KGEGAGMYVKVSMAGAPYLR 107
KD A PPAKAQVVGWPPVRS+RKN M QK A +VKVSM GAPYLR
Sbjct: 73 KDPAKPPAKAQVVGWPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLR 132
Query: 108 KIDLKVYKSYPELLKALENMFKC-TFGEYSER------------EGYNGSEYVPTYEDKD 154
K+DL +YK+Y +L AL MF T G Y + + N SEYVPTYEDKD
Sbjct: 133 KVDLTMYKTYKDLSDALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKD 192
Query: 155 GDWMLVGDVPWD 166
GDWMLVGDVPW+
Sbjct: 193 GDWMLVGDVPWE 204
>Medtr1g069495.1 | auxin response factor | HC |
chr1:30104004-30099851 | 20130731
Length = 272
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 87/178 (48%), Gaps = 59/178 (33%)
Query: 68 AQVVGWPPVRSFRKNS---------------------------------------MQQKK 88
+QVVGWPP+RS+R NS +++K+
Sbjct: 81 SQVVGWPPLRSYRVNSFNANAKSTEAFNSVAEKSKNNNIVVRKSTDNGNDDNHINIKEKR 140
Query: 89 GEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNG----- 143
+VKV+M G P RK+DL + SY L + LE+MF + + + G NG
Sbjct: 141 NLRKSPFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFDESTTSVTSK-GSNGEDHNM 199
Query: 144 --------------SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGLG 187
S++V TYEDK+GDWMLVGDVPW MF+SS +RLRIM+ SEA GL
Sbjct: 200 TTRGERHSILLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLA 257
>Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568904
| 20130731
Length = 268
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 86/173 (49%), Gaps = 47/173 (27%)
Query: 57 SDDKDSAPPAKAQ-------VVGWPPVRSFRKN--------------SMQQKK------- 88
S ++SA P ++Q VVGWPP+RSFRKN M Q K
Sbjct: 88 SSARNSALPNRSQKRNAASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNK 147
Query: 89 ---GEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYN--- 142
G G++VK++M G P RKID+ Y SY +L A++++F+ E + G N
Sbjct: 148 PISNSGKGLFVKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQ 207
Query: 143 -------------GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSE 182
EY YED +GD MLVGDVPW MF+S+ KRLR+ K S+
Sbjct: 208 EEEDTGMKGSLTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260
>Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568904
| 20130731
Length = 271
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 86/173 (49%), Gaps = 47/173 (27%)
Query: 57 SDDKDSAPPAKAQ-------VVGWPPVRSFRKN--------------SMQQKK------- 88
S ++SA P ++Q VVGWPP+RSFRKN M Q K
Sbjct: 88 SSARNSALPNRSQKRNAASPVVGWPPIRSFRKNIASGSSSKPPTESRPMVQDKVIVDSNK 147
Query: 89 ---GEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYN--- 142
G G++VK++M G P RKID+ Y SY +L A++++F+ E + G N
Sbjct: 148 PISNSGKGLFVKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQ 207
Query: 143 -------------GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSE 182
EY YED +GD MLVGDVPW MF+S+ KRLR+ K S+
Sbjct: 208 EEEDTGMKGSLTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSKSSD 260
>Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:44155116-44156253 | 20130731
Length = 198
Score = 103 bits (258), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 64/98 (65%), Gaps = 13/98 (13%)
Query: 95 YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGY-----------NG 143
YVKV++ GAPYLRK+DL+VY+ Y LL AL MF ++ R N
Sbjct: 88 YVKVAVDGAPYLRKVDLEVYECYDNLLTALNTMFSTNC--FTIRNDLMNEKKFMDSRKNT 145
Query: 144 SEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGS 181
+EY+ TYEDKDGDWML+GDVPW MF+ SCKR+R+M S
Sbjct: 146 NEYLATYEDKDGDWMLLGDVPWKMFVESCKRIRLMISS 183
>Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 79/162 (48%), Gaps = 45/162 (27%)
Query: 66 AKAQVVGWPPVRSFRKN--------------SMQQK-------------KGEGAGMYVKV 98
A VVGWPP+RSFRKN QQ G G++VK+
Sbjct: 93 APGPVVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGKGLFVKI 152
Query: 99 SMAGAPYLRKIDLKVYKSYPELLKALENMFK-----------CTFGEYSEREG------Y 141
+M G P RK+DL Y SY L A++++F+ C E E
Sbjct: 153 NMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLL 212
Query: 142 NGS-EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSE 182
+GS EY YED +GD MLVGDVPW MF+S+ KRLR++K +E
Sbjct: 213 DGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340807-43336605 | 20130731
Length = 269
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 79/162 (48%), Gaps = 45/162 (27%)
Query: 66 AKAQVVGWPPVRSFRKN--------------SMQQK-------------KGEGAGMYVKV 98
A VVGWPP+RSFRKN QQ G G++VK+
Sbjct: 93 APGPVVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGKGLFVKI 152
Query: 99 SMAGAPYLRKIDLKVYKSYPELLKALENMFK-----------CTFGEYSEREG------Y 141
+M G P RK+DL Y SY L A++++F+ C E E
Sbjct: 153 NMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLL 212
Query: 142 NGS-EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSE 182
+GS EY YED +GD MLVGDVPW MF+S+ KRLR++K +E
Sbjct: 213 DGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340473-43336605 | 20130731
Length = 269
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 79/162 (48%), Gaps = 45/162 (27%)
Query: 66 AKAQVVGWPPVRSFRKN--------------SMQQK-------------KGEGAGMYVKV 98
A VVGWPP+RSFRKN QQ G G++VK+
Sbjct: 93 APGPVVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGKGLFVKI 152
Query: 99 SMAGAPYLRKIDLKVYKSYPELLKALENMFK-----------CTFGEYSEREG------Y 141
+M G P RK+DL Y SY L A++++F+ C E E
Sbjct: 153 NMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLL 212
Query: 142 NGS-EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSE 182
+GS EY YED +GD MLVGDVPW MF+S+ KRLR++K +E
Sbjct: 213 DGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>Medtr6g488150.2 | auxin response factor | HC |
chr6:33216341-33219347 | 20130731
Length = 193
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 84/165 (50%), Gaps = 39/165 (23%)
Query: 8 MNLKATELRLGLPG-----RD----ELENAVVRC--------NKRSSPEAXXXXXXXXXX 50
+NLKATELRLGLPG RD E +NA C KR +A
Sbjct: 15 LNLKATELRLGLPGSESPERDNDLLEEKNAYSLCMLNSLFSGAKRGFSDAIDMRKSSNQQ 74
Query: 51 XXXXITSDDKD----------SAPPAKAQVVGWPPVRSFRKNSM--QQKKGEG------- 91
+ D + S AK QVVGWPP+RSFRKNSM Q +K +
Sbjct: 75 GS--VAKDQTNPLNEKKKSQISGSAAKEQVVGWPPIRSFRKNSMATQSQKNDNDDVEAKS 132
Query: 92 AGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKC-TFGEY 135
+YVKVSM GAPYLRK+DLK++ +Y EL ALE MF C T E+
Sbjct: 133 GCLYVKVSMDGAPYLRKVDLKIFGTYKELSSALEKMFSCFTISEF 177
>Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |
chr2:43340462-43336605 | 20130731
Length = 268
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 79/162 (48%), Gaps = 45/162 (27%)
Query: 66 AKAQVVGWPPVRSFRKN--------------SMQQK-------------KGEGAGMYVKV 98
A VVGWPP+RSFRKN QQ G G++VK+
Sbjct: 93 APGPVVGWPPIRSFRKNLATSSSSKPSPPESQTQQDMHNNVSAGKKPIDNNYGKGLFVKI 152
Query: 99 SMAGAPYLRKIDLKVYKSYPELLKALENMFK-----------CTFGEYSEREG------Y 141
+M G P RK+DL Y SY L A++++F+ C E E
Sbjct: 153 NMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKVITGLL 212
Query: 142 NGS-EYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSE 182
+GS EY YED +GD MLVGDVPW MF+S+ KRLR++K +E
Sbjct: 213 DGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSTE 254
>Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:51327848-51326632 | 20130731
Length = 184
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 77/118 (65%), Gaps = 3/118 (2%)
Query: 67 KAQVVGWPPV-RSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALE 125
+ + WPP+ +S ++++ +K + ++VKV M G P RK++L + SY L+KAL
Sbjct: 69 REETCDWPPINKSILRSTLAEK--QRPSLFVKVYMEGIPIGRKLNLLEHHSYDGLIKALC 126
Query: 126 NMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEA 183
+MF+ T + + + + +V TYED++GDWM+VGDVPW+MF+SS KRL+I + +
Sbjct: 127 HMFRTTILCPNSQPLNSWNFHVLTYEDQEGDWMMVGDVPWEMFLSSVKRLKITRANSC 184
>Medtr5g067350.2 | auxin response factor | HC |
chr5:28450190-28454050 | 20130731
Length = 272
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 54/79 (68%), Gaps = 10/79 (12%)
Query: 62 SAPPAKAQVVGWPPVRSFRKNSMQQ----------KKGEGAGMYVKVSMAGAPYLRKIDL 111
+AP +KAQVVGWPP+RSFRKNS+ K G G ++VKVSM GAPYLRK+DL
Sbjct: 189 TAPASKAQVVGWPPIRSFRKNSLTTASKNTEEVDGKLGSGGAVFVKVSMDGAPYLRKVDL 248
Query: 112 KVYKSYPELLKALENMFKC 130
K Y +Y EL +LE MF C
Sbjct: 249 KNYTAYSELSSSLEKMFSC 267
>Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |
chr7:45409781-45408778 | 20130731
Length = 161
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 86 QKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSE 145
Q+ + +YVKV M G P RK+++ ++SY EL+K LE+MF T +E +G
Sbjct: 61 QQNYDYNSLYVKVYMEGIPIGRKLNILAHQSYHELVKTLEHMFDTTILWGNEMDGVQPER 120
Query: 146 -YVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMK 179
+V TYED++GD ++VGDVPW+MF+S+ KRL+I +
Sbjct: 121 CHVLTYEDEEGDLVMVGDVPWEMFLSTVKRLKITR 155
>Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:38333347-38334717 | 20130731
Length = 176
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 16/115 (13%)
Query: 73 WPPVRSFRKNSMQQKKGE-------GAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALE 125
W P+ QQ+ GE + +VKV M G P RK++L + Y EL+ LE
Sbjct: 64 WQPI--------QQQGGEVNDCSDYNSAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLE 115
Query: 126 NMFKCTFGEYSEREGYNGSE-YVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMK 179
MF T +E +G +V TYED +GD ++VGDVPW+MF+SS KRL+I +
Sbjct: 116 QMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEMFLSSVKRLKITR 170
>Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |
chr3:49381656-49382979 | 20130731
Length = 213
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 20/132 (15%)
Query: 69 QVVGWPPVRSFRKNSMQ--------QKKGEGAG-----MYVKVSMAGAPYLRKIDLKVYK 115
+VGWPP++S+RK +K E +YVKV+M G R+I+L++Y
Sbjct: 88 HLVGWPPIKSWRKKEFHDQQLPEHIRKANENQNRRSKPLYVKVNMEGVGMGRQINLRLYN 147
Query: 116 SYPELLKALENMF-KCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKR 174
SY L +L +MF KC E + G+ Y T+++K G+W L + W F+ + +R
Sbjct: 148 SYQTLKDSLISMFVKCQNFEET------GANYTLTFQNKQGEWKLTSHITWQSFIGTVRR 201
Query: 175 LRIMKGSEAKGL 186
L I++ E + +
Sbjct: 202 LAILRNGECETI 213
>Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:47460828-47458972 | 20130731
Length = 208
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 19/122 (15%)
Query: 70 VVGWPPVRSFRK------NSMQQKK-----GEGAGMYVKVSMAGAPYLRKIDLKVYKSYP 118
+VGWPPV RK N ++ YVKV M G RK++L ++ S+
Sbjct: 93 LVGWPPVNCRRKKLRCNENDVEDHVVPIDGSHNHRNYVKVKMEGVGIARKVNLGMHHSFH 152
Query: 119 ELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIM 178
L + L +MF E+ ++ +Y Y+DK+GDW+L D+ W F+ +RL+++
Sbjct: 153 TLNQTLMDMF--------EKCDHDQQQYELVYQDKEGDWLLAQDISWRSFIECAQRLKLL 204
Query: 179 KG 180
K
Sbjct: 205 KS 206
>Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |
chr1:38333347-38334717 | 20130731
Length = 157
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 84 MQQKKGE-------GAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYS 136
+QQ+ GE + +VKV M G P RK++L + Y EL+ LE MF T +
Sbjct: 67 IQQQGGEVNDCSDYNSAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFDTTILWGT 126
Query: 137 EREGYNGSE-YVPTYEDKDGDWMLVGDVPWD 166
E +G +V TYED +GD ++VGDVPW+
Sbjct: 127 EMDGVQSERCHVLTYEDGEGDLIMVGDVPWE 157
>Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |
chr1:49537832-49539058 | 20130731
Length = 178
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 7/124 (5%)
Query: 62 SAPPAKAQVVGWPPV---RSFRKNSMQQKKGEGAG---MYVKVSMAGAPYLRKIDLKVYK 115
SA ++ WP + RS +N ++ +G + YVKV+M G RKI + +
Sbjct: 46 SANLYDDDLMDWPNMKNSRSVHENFDEEIEGVQSNERWAYVKVNMDGVSIGRKICILDHG 105
Query: 116 SYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRL 175
Y L LE+MF R +GSEY Y+D + +W VGDV W F+ KRL
Sbjct: 106 GYSSLAIQLEDMFGSQ-SVSGIRLFESGSEYSLFYKDSEDNWRTVGDVLWKEFVECVKRL 164
Query: 176 RIMK 179
RI +
Sbjct: 165 RIAR 168
>Medtr1g024025.1 | auxin response factor 2 | LC |
chr1:7778460-7771119 | 20130731
Length = 1265
Score = 57.0 bits (136), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 95 YVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKD 154
Y KV AG+ R ID+ +K+Y EL++A+E C FG GS + Y D +
Sbjct: 756 YTKVQKAGS-VGRSIDVTTFKNYEELIRAIE----CMFGLDGLLNDTKGSGWKLVYVDYE 810
Query: 155 GDWMLVGDVPWDMFMSSCKRLRIMKGSEAK 184
D +LVGD PW+ F+ + +RI+ SE K
Sbjct: 811 SDVLLVGDDPWEEFVGCVRCIRILSPSEVK 840
>Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |
chr4:53308708-53310353 | 20130731
Length = 173
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 96 VKVSMAGAPYLRKIDLKVYKSYPELLKALENMF-----KCTFGEYSEREGYNGSEYVPTY 150
V V + G ++I L + SY L KAL MF C G++ +V Y
Sbjct: 70 VTVVLEGRSICQRISLHNHGSYQSLAKALRQMFVDCTDDCDAGDHHLDLSNAIPGHVIAY 129
Query: 151 EDKDGDWMLVGDVPWDMFMSSCKRLRIM--KGSEAKG 185
ED + D +L GD+ W F+ KR+RI+ KG+ KG
Sbjct: 130 EDMENDLLLAGDLTWKDFVRVAKRIRILPAKGNSRKG 166
>Medtr4g124900.1 | auxin response factor 2 | HC |
chr4:51795315-51802487 | 20130731
Length = 1120
Score = 49.3 bits (116), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 62 SAPPAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELL 121
S P + VG N ++ + + Y KV G+ R ID+ YK Y EL
Sbjct: 962 SFKPGCSNDVGINDTSGVLNNGLRANQNQRMRTYTKVQKRGS-VGRCIDVTRYKGYDELR 1020
Query: 122 KALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGS 181
L MF G + E +++ Y D + D +LVGD PW+ F+S + ++I+ +
Sbjct: 1021 YDLARMF----GIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSA 1076
Query: 182 EAKGL 186
E + +
Sbjct: 1077 EVQQM 1081
>Medtr4g124900.2 | auxin response factor 2 | HC |
chr4:51795315-51802487 | 20130731
Length = 1097
Score = 48.9 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Query: 62 SAPPAKAQVVGWPPVRSFRKNSMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELL 121
S P + VG N ++ + + Y KV G+ R ID+ YK Y EL
Sbjct: 939 SFKPGCSNDVGINDTSGVLNNGLRANQNQRMRTYTKVQKRGS-VGRCIDVTRYKGYDELR 997
Query: 122 KALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGS 181
L MF G + E +++ Y D + D +LVGD PW+ F+S + ++I+ +
Sbjct: 998 YDLARMF----GIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSA 1053
Query: 182 EAKGL 186
E + +
Sbjct: 1054 EVQQM 1058
>Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-103331
| 20130731
Length = 671
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 83 SMQQKKGEGAGMYVKVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYN 142
S Q+ + KV M G R +DL + Y +LL+ LE MF GE
Sbjct: 537 SPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIE-GELCGAT--- 592
Query: 143 GSEYVPTYEDKDGDWMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
+++ Y D + D M+VGD PW F S +++ I E K L
Sbjct: 593 -KKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKL 635
>Medtr4g021580.1 | auxin response factor 2 | HC |
chr4:7078271-7072794 | 20130731
Length = 667
Score = 47.8 bits (112), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 97 KVSMAGAPYLRKIDLKVYKSYPELLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKDGD 156
KV M G R +DL Y +L+ LE +F G+ R N E V + D +GD
Sbjct: 559 KVQMQGVAVGRAVDLATLNGYDQLIGELEELFDIK-GQLQHR---NTWEIV--FTDDEGD 612
Query: 157 WMLVGDVPWDMFMSSCKRLRIMKGSEAKGL 186
MLVGD PW F + +R+ I + K +
Sbjct: 613 MMLVGDDPWPEFCNMVRRIFICSSQDVKKM 642