Miyakogusa Predicted Gene
- Lj0g3v0086789.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0086789.1 Non Characterized Hit- tr|D5A823|D5A823_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,26.42,0.000000000000002,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; PPR,Pentatricopeptide repeat; PPR:
pentatricopeptid,CUFF.4616.1
(308 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g065100.1 | PPR containing plant-like protein | HC | chr6:... 293 1e-79
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 63 4e-10
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 62 8e-10
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 62 8e-10
Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC | ... 61 1e-09
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 60 2e-09
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 60 2e-09
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 59 6e-09
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 59 6e-09
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 59 6e-09
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 59 6e-09
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 59 6e-09
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 59 6e-09
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 59 6e-09
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 59 7e-09
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 59 7e-09
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 59 7e-09
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 59 8e-09
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 2e-08
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 2e-08
Medtr3g088505.3 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr3g088505.1 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr3g088505.2 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr3g088505.4 | PPR containing plant-like protein | HC | chr3:... 57 2e-08
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 57 3e-08
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 57 3e-08
Medtr6g017035.1 | PPR containing plant-like protein | HC | chr6:... 57 3e-08
Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 57 3e-08
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 57 3e-08
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 57 3e-08
Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 56 5e-08
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 56 6e-08
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 55 7e-08
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 7e-08
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 55 8e-08
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 8e-08
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 55 9e-08
Medtr7g118240.1 | PPR containing plant-like protein | HC | chr7:... 55 9e-08
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 55 1e-07
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 55 1e-07
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 54 1e-07
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 1e-07
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 54 1e-07
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 1e-07
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 54 2e-07
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 2e-07
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 54 2e-07
Medtr8g089700.1 | PPR containing plant-like protein | HC | chr8:... 54 2e-07
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 54 2e-07
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 54 2e-07
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 54 2e-07
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 54 2e-07
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 54 2e-07
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 54 2e-07
Medtr1g011520.1 | PPR containing plant-like protein | HC | chr1:... 54 3e-07
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 54 3e-07
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 53 4e-07
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 5e-07
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 53 5e-07
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 53 5e-07
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 53 5e-07
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 52 5e-07
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 6e-07
Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putati... 52 6e-07
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 52 7e-07
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 52 7e-07
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 7e-07
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 52 8e-07
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 52 9e-07
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 52 1e-06
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 52 1e-06
Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 52 1e-06
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 52 1e-06
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 51 1e-06
Medtr2g072170.1 | PPR containing plant-like protein | HC | chr2:... 51 1e-06
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 51 1e-06
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 51 1e-06
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 51 1e-06
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 51 1e-06
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 51 1e-06
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 51 1e-06
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 51 2e-06
Medtr8g005870.1 | PPR containing plant-like protein | HC | chr8:... 51 2e-06
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 2e-06
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 50 2e-06
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 2e-06
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 50 2e-06
Medtr3g078580.1 | PPR containing plant-like protein | HC | chr3:... 50 2e-06
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 2e-06
Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 2e-06
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 3e-06
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 50 3e-06
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 3e-06
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 50 3e-06
Medtr1g055295.1 | PPR containing plant-like protein | HC | chr1:... 50 4e-06
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 50 4e-06
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 4e-06
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 50 4e-06
Medtr2g016740.1 | PPR containing plant-like protein | HC | chr2:... 49 4e-06
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 49 4e-06
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 4e-06
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 49 4e-06
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 4e-06
Medtr5g094770.1 | PPR containing plant-like protein | HC | chr5:... 49 4e-06
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 5e-06
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 49 6e-06
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 49 7e-06
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 49 8e-06
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 49 8e-06
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 49 8e-06
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 48 9e-06
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 48 9e-06
>Medtr6g065100.1 | PPR containing plant-like protein | HC |
chr6:24103958-24105064 | 20130731
Length = 333
Score = 293 bits (750), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/337 (48%), Positives = 204/337 (60%), Gaps = 39/337 (11%)
Query: 1 MSFLLKRPNNFLNSNSIXXXXXXXXXXXAAKPFPDHPTSAYYDELAVEAGTSGDLNALRD 60
MSFL K NN +S P P TS YD LA TSGD +L
Sbjct: 1 MSFLRKHLNNISHS-----PLSTLRRFSNLTPPPTSATS--YDTLAANFATSGDFTSLHS 53
Query: 61 ILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRTLSGLNPGFTRKSAFESLVTRLCKL 120
ILNKR Q G FNTKHTF+FIT +N T +L+ +++ TLS LNPGFTR++AF+SL+TRLCKL
Sbjct: 54 ILNKRIQHGFFNTKHTFNFITNSNFTPSLLQNLITTLSRLNPGFTRRNAFDSLITRLCKL 113
Query: 121 ERADDALQVVESMA--------------------------------VEGRMAGFGLRLDL 148
+DAL VV+SM+ V M+ G+ LDL
Sbjct: 114 RLIEDALTVVQSMSRVDDMDNELKACTFHPILSFLTRVKSLDQAKRVVEVMSELGVPLDL 173
Query: 149 TAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRR 208
TAHN FLM+YC+ GD+EAA VL+ +E EG D RT+DALVLGAC+ V GA+ +VRR
Sbjct: 174 TAHNYFLMTYCYVGDVEAAVTVLRTMEEEGFCFDSRTYDALVLGACRKRNVVGAMVLVRR 233
Query: 209 MVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKK 268
MV+DG PMLYSTHM VI L++ + ++QA Y R F GKD LD +L GCLG KLM + K
Sbjct: 234 MVDDGAPMLYSTHMFVIEALVKRDLFEQALSYVRCFSGKDKGLDCELFGCLGGKLMGMSK 293
Query: 269 VKEAMLILDEMNQKGLPMGQKLKAFYLKNAGTVNGVK 305
+KEAML+L EM++KGL M + ++ FY N G N K
Sbjct: 294 LKEAMLVLREMDEKGLKMCKNVREFYDMNVGVENDDK 330
>Medtr1g068960.1 | PPR containing plant-like protein | HC |
chr1:29509792-29507424 | 20130731
Length = 727
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 103 GFTRKSA-FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFS 161
G +R S + +L+ LCK +R ++A Q+++ M +EG L+ D +N L +C
Sbjct: 477 GVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG------LKPDKFTYNSLLTYFCRV 530
Query: 162 GDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTH 221
GD+E A +++ + + G D T+ L+ G C+AG VD A ++R + G+ + +
Sbjct: 531 GDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAY 590
Query: 222 MCVITTLLRMNCYKQARKYARSFGGKDTTLD 252
VI L K+ + R K D
Sbjct: 591 NPVIQALFMRKRTKEGMRLFREMMEKSDPPD 621
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 12/233 (5%)
Query: 59 RDILNKRFQD----GCFNTKHTFSFITATNLTSTLIDDVVRTLSGLNPGFTRKSA--FES 112
+DI + F++ GC + T+S + + + + + L + ++A + +
Sbjct: 393 QDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNT 452
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
L+ LCK R +DA ++ + M + G+ +N + C + +E A+ ++
Sbjct: 453 LIDGLCKSRRIEDAEEIFDQMEL------LGVSRSSVTYNTLIDGLCKNKRVEEASQLMD 506
Query: 173 RIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMN 232
++ EGL D T+++L+ C+ G ++ A +V+ M +G T+ +I L R
Sbjct: 507 QMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAG 566
Query: 233 CYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLP 285
A K RS K L + L M K+ KE M + EM +K P
Sbjct: 567 RVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDP 619
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 31/207 (14%)
Query: 108 SAFESLVTRLCKLERADDALQVVESMAVEG-----------------------------R 138
S F L+ LCK + A+ ++E MA G +
Sbjct: 168 STFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQ 227
Query: 139 MAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGV 198
M G+G L + + + +C G +E A + + EG + D TF++LV G C+ G
Sbjct: 228 MLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGN 287
Query: 199 VDGAIAVVRRMVEDGV-PMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLG 257
V+ A+ +V M+E G P +Y T+ +I+ + ++ +++A + + ++ + +T
Sbjct: 288 VNDALDIVDFMIEKGFDPDVY-TYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYN 346
Query: 258 CLGSKLMMLKKVKEAMLILDEMNQKGL 284
L S L +++ A + + KGL
Sbjct: 347 TLISALCKENEIEAATDLARILVSKGL 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 110/253 (43%), Gaps = 12/253 (4%)
Query: 32 PFPDHPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLID 91
P P + T L ++ S +++ +L + G TF+ + + I+
Sbjct: 63 PLPPNET------LLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIE 116
Query: 92 DVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
++++ L GF + F ++ D+ L++VE + +M G+ LD++
Sbjct: 117 NLLKILEN-ELGFKPDTNFYNIALNALV---EDNKLKLVEML--HSKMVNEGIVLDVSTF 170
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
N+ + + C + L A +L+ + N GL D TF L+ G + G ++GA+ + ++M+
Sbjct: 171 NVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLG 230
Query: 212 DGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKE 271
G + + ++ + ++A ++ + + D L + + V +
Sbjct: 231 YGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVND 290
Query: 272 AMLILDEMNQKGL 284
A+ I+D M +KG
Sbjct: 291 ALDIVDFMIEKGF 303
>Medtr4g074390.1 | PPR containing plant-like protein | HC |
chr4:28340117-28337429 | 20130731
Length = 583
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 9/187 (4%)
Query: 98 SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMS 157
GL P + SL+ LC + ++A+ + + +M G GL+ ++ +N +
Sbjct: 302 QGLKPNIV---TYNSLINGLCNNGKLEEAIDLWD------KMVGLGLKPNIVTYNALING 352
Query: 158 YCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPML 217
+C ++ A VL + + L + TF+ ++ CK G+++ ++ M+E+G+
Sbjct: 353 FCKKKMMKEATKVLDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLEEGILPN 412
Query: 218 YSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILD 277
ST+ C+I L R + A++ K D L L K + A +L+
Sbjct: 413 VSTYKCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN 472
Query: 278 EMNQKGL 284
EM GL
Sbjct: 473 EMFNLGL 479
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ L+ LCK +++ +A +++ M GL+ + +N + YC G L+AA
Sbjct: 451 YNILIDGLCKNDKSRNAEKLL------NEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
V KR+E E + T++ L+ G CK ++ A ++ M+E G+
Sbjct: 505 VRKRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGL 549
>Medtr5g077930.1 | PPR containing plant-like protein | HC |
chr5:33269909-33266508 | 20130731
Length = 811
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 14/179 (7%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
F +L+ CK + D AL+ E M G +R DL +N + C GDL+ A
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRG------IRPDLITYNALINGLCRDGDLKEAR 386
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+L + G D TF L+ G CK G +D A+ + RMVE+G+ + +I+ L
Sbjct: 387 KLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGL 446
Query: 229 LRMNCYKQARKYAR---SFGGK-DTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
R + A + + S G K D T ++ C K VK +L EM + G
Sbjct: 447 CRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKK----GDVKMGAKLLKEMQRDG 501
>Medtr8g070050.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29734562-29735236 | 20130731
Length = 224
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 85/183 (46%), Gaps = 6/183 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F ++ LC+L+R ++A + M +G+ + +N+ + S C G+ +
Sbjct: 48 FSCIIDGLCRLKRTEEAFECF------NEMVEWGVNPNAIIYNILIRSLCSIGETTRSVK 101
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+L+R++ EG++ D +++AL+ C+ V+ A + M + G T+ I L
Sbjct: 102 LLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALS 161
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPMGQK 289
++A+K S + D+ + + L+ +V+EA I++ QKG+ +
Sbjct: 162 ESGRLEEAKKMFYSIEANGCSPDSYVCNLVIKALVRHDRVEEAQKIVERCRQKGIALNCT 221
Query: 290 LKA 292
L +
Sbjct: 222 LDS 224
>Medtr8g054410.2 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 97 LSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLM 156
+ G+ P + + ++V LCK R ++AL + G + ++ ++ +
Sbjct: 380 MDGIEPD---EVTYSAIVNGLCKSGRVEEALSYFQFCNENG------VVVNAVFYSSLID 430
Query: 157 SYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPM 216
+G ++ A V + +G D ++AL+ G CK G +D A+A+V+RM DG
Sbjct: 431 GLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQ 490
Query: 217 LYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLIL 276
T +I+ L R++ ++A K K T + L L + KV A +L
Sbjct: 491 TVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKVL 550
Query: 277 DEMNQKGLPMGQKLKAFY 294
DE+ PMG L+ Y
Sbjct: 551 DEL----APMGVVLETAY 564
>Medtr8g054410.1 | PPR containing plant-like protein | HC |
chr8:19775422-19777359 | 20130731
Length = 645
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 88/198 (44%), Gaps = 13/198 (6%)
Query: 97 LSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLM 156
+ G+ P + + ++V LCK R ++AL + G + ++ ++ +
Sbjct: 380 MDGIEPD---EVTYSAIVNGLCKSGRVEEALSYFQFCNENG------VVVNAVFYSSLID 430
Query: 157 SYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPM 216
+G ++ A V + +G D ++AL+ G CK G +D A+A+V+RM DG
Sbjct: 431 GLGKAGRVDEAEKVFDEMAEKGCPPDSYCYNALIDGLCKCGRIDDALALVKRMERDGCEQ 490
Query: 217 LYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLIL 276
T +I+ L R++ ++A K K T + L L + KV A +L
Sbjct: 491 TVYTFTILISELFRVHRNEEAVKMWDLMIDKGITPNVACFRALSIGLCLSGKVARACKVL 550
Query: 277 DEMNQKGLPMGQKLKAFY 294
DE+ PMG L+ Y
Sbjct: 551 DEL----APMGVVLETAY 564
>Medtr5g090170.4 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 21/226 (9%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATN-------LTST 88
+P + Y+ L SG +D+L K F F+F + L S
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD-AFTFNIMIDGLCKKGYLVSA 391
Query: 89 L--IDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRL 146
L +D++V+ G P + L+ CK ++A +VV SM+ +G L L
Sbjct: 392 LEFLDEMVK--KGFEPNVI---TYTILIDGFCKQGHFEEASKVVNSMSAKG------LSL 440
Query: 147 DLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVV 206
+ +N + + C G ++ A + + ++G D TF++L+ G CK ++ A+ +
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLY 500
Query: 207 RRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLD 252
R M+ +GV T+ +I LR+ +QA K + LD
Sbjct: 501 RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 13/250 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P S Y L + +N +L + F GC TF+ + + I + +
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 97 LSG-LNPGFTRKSAFES-LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
L FT + + L+ LC++ + D+A ++ + + +N
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----------NPNTVLYNTL 342
Query: 155 LMSYCFSGDLEAAAGVL-KRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ Y SG E A +L K + G D TF+ ++ G CK G + A+ + MV+ G
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
T+ +I + +++A K S K +L+T CL L K+++A+
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 274 LILDEMNQKG 283
+ EM+ KG
Sbjct: 463 QMYGEMSSKG 472
>Medtr5g090170.2 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 21/226 (9%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATN-------LTST 88
+P + Y+ L SG +D+L K F F+F + L S
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD-AFTFNIMIDGLCKKGYLVSA 391
Query: 89 L--IDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRL 146
L +D++V+ G P + L+ CK ++A +VV SM+ +G L L
Sbjct: 392 LEFLDEMVK--KGFEPNVI---TYTILIDGFCKQGHFEEASKVVNSMSAKG------LSL 440
Query: 147 DLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVV 206
+ +N + + C G ++ A + + ++G D TF++L+ G CK ++ A+ +
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLY 500
Query: 207 RRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLD 252
R M+ +GV T+ +I LR+ +QA K + LD
Sbjct: 501 RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 13/250 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P S Y L + +N +L + F GC TF+ + + I + +
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 97 LSG-LNPGFTRKSAFES-LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
L FT + + L+ LC++ + D+A ++ + + +N
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----------NPNTVLYNTL 342
Query: 155 LMSYCFSGDLEAAAGVL-KRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ Y SG E A +L K + G D TF+ ++ G CK G + A+ + MV+ G
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
T+ +I + +++A K S K +L+T CL L K+++A+
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 274 LILDEMNQKG 283
+ EM+ KG
Sbjct: 463 QMYGEMSSKG 472
>Medtr5g090170.3 | PPR containing plant-like protein | HC |
chr5:39278407-39283317 | 20130731
Length = 704
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 21/226 (9%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATN-------LTST 88
+P + Y+ L SG +D+L K F F+F + L S
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD-AFTFNIMIDGLCKKGYLVSA 391
Query: 89 L--IDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRL 146
L +D++V+ G P + L+ CK ++A +VV SM+ +G L L
Sbjct: 392 LEFLDEMVK--KGFEPNVI---TYTILIDGFCKQGHFEEASKVVNSMSAKG------LSL 440
Query: 147 DLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVV 206
+ +N + + C G ++ A + + ++G D TF++L+ G CK ++ A+ +
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLY 500
Query: 207 RRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLD 252
R M+ +GV T+ +I LR+ +QA K + LD
Sbjct: 501 RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 13/250 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P S Y L + +N +L + F GC TF+ + + I + +
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 97 LSG-LNPGFTRKSAFES-LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
L FT + + L+ LC++ + D+A ++ + + +N
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----------NPNTVLYNTL 342
Query: 155 LMSYCFSGDLEAAAGVL-KRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ Y SG E A +L K + G D TF+ ++ G CK G + A+ + MV+ G
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
T+ +I + +++A K S K +L+T CL L K+++A+
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 274 LILDEMNQKG 283
+ EM+ KG
Sbjct: 463 QMYGEMSSKG 472
>Medtr5g090170.5 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 21/226 (9%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATN-------LTST 88
+P + Y+ L SG +D+L K F F+F + L S
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD-AFTFNIMIDGLCKKGYLVSA 391
Query: 89 L--IDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRL 146
L +D++V+ G P + L+ CK ++A +VV SM+ +G L L
Sbjct: 392 LEFLDEMVK--KGFEPNVI---TYTILIDGFCKQGHFEEASKVVNSMSAKG------LSL 440
Query: 147 DLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVV 206
+ +N + + C G ++ A + + ++G D TF++L+ G CK ++ A+ +
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLY 500
Query: 207 RRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLD 252
R M+ +GV T+ +I LR+ +QA K + LD
Sbjct: 501 RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 13/250 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P S Y L + +N +L + F GC TF+ + + I + +
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 97 LSG-LNPGFTRKSAFES-LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
L FT + + L+ LC++ + D+A ++ + + +N
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----------NPNTVLYNTL 342
Query: 155 LMSYCFSGDLEAAAGVL-KRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ Y SG E A +L K + G D TF+ ++ G CK G + A+ + MV+ G
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
T+ +I + +++A K S K +L+T CL L K+++A+
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 274 LILDEMNQKG 283
+ EM+ KG
Sbjct: 463 QMYGEMSSKG 472
>Medtr5g090170.6 | PPR containing plant-like protein | HC |
chr5:39278448-39283249 | 20130731
Length = 704
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 21/226 (9%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATN-------LTST 88
+P + Y+ L SG +D+L K F F+F + L S
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD-AFTFNIMIDGLCKKGYLVSA 391
Query: 89 L--IDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRL 146
L +D++V+ G P + L+ CK ++A +VV SM+ +G L L
Sbjct: 392 LEFLDEMVK--KGFEPNVI---TYTILIDGFCKQGHFEEASKVVNSMSAKG------LSL 440
Query: 147 DLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVV 206
+ +N + + C G ++ A + + ++G D TF++L+ G CK ++ A+ +
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLY 500
Query: 207 RRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLD 252
R M+ +GV T+ +I LR+ +QA K + LD
Sbjct: 501 RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 13/250 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P S Y L + +N +L + F GC TF+ + + I + +
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 97 LSG-LNPGFTRKSAFES-LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
L FT + + L+ LC++ + D+A ++ + + +N
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----------NPNTVLYNTL 342
Query: 155 LMSYCFSGDLEAAAGVL-KRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ Y SG E A +L K + G D TF+ ++ G CK G + A+ + MV+ G
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
T+ +I + +++A K S K +L+T CL L K+++A+
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 274 LILDEMNQKG 283
+ EM+ KG
Sbjct: 463 QMYGEMSSKG 472
>Medtr4g108060.1 | PPR containing plant-like protein | HC |
chr4:44791239-44788813 | 20130731
Length = 583
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 9/187 (4%)
Query: 98 SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMS 157
GL P + SL+ LC + ++A+ + + +M G GL+ ++ +N +
Sbjct: 302 QGLKPNIV---TYNSLINGLCNNGKLEEAIDLWD------KMVGLGLKPNIVTYNALING 352
Query: 158 YCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPML 217
+C ++ A V + + L + TF+ ++ CK G+++ ++ M+++G+
Sbjct: 353 FCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN 412
Query: 218 YSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILD 277
ST+ C+I L R + A++ K D L L K + A +L+
Sbjct: 413 VSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN 472
Query: 278 EMNQKGL 284
EM GL
Sbjct: 473 EMFNLGL 479
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ L+ LCK +++ +A +++ M GL+ + +N + YC G L+AA
Sbjct: 451 YNILIDGLCKNDKSRNAEKLL------NEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
V R+E E + T++ L+ G CK ++ A ++ M+E G+
Sbjct: 505 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGL 549
>Medtr5g090170.1 | PPR containing plant-like protein | HC |
chr5:39278834-39281891 | 20130731
Length = 782
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 21/226 (9%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATN-------LTST 88
+P + Y+ L SG +D+L K F F+F + L S
Sbjct: 333 NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPD-AFTFNIMIDGLCKKGYLVSA 391
Query: 89 L--IDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRL 146
L +D++V+ G P + L+ CK ++A +VV SM+ +G L L
Sbjct: 392 LEFLDEMVK--KGFEPNVI---TYTILIDGFCKQGHFEEASKVVNSMSAKG------LSL 440
Query: 147 DLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVV 206
+ +N + + C G ++ A + + ++G D TF++L+ G CK ++ A+ +
Sbjct: 441 NTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLY 500
Query: 207 RRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLD 252
R M+ +GV T+ +I LR+ +QA K + LD
Sbjct: 501 RDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 13/250 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P S Y L + +N +L + F GC TF+ + + I + +
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 97 LSG-LNPGFTRKSAFES-LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
L FT + + L+ LC++ + D+A ++ + + +N
Sbjct: 293 HDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP----------NPNTVLYNTL 342
Query: 155 LMSYCFSGDLEAAAGVL-KRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ Y SG E A +L K + G D TF+ ++ G CK G + A+ + MV+ G
Sbjct: 343 INGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKG 402
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
T+ +I + +++A K S K +L+T CL L K+++A+
Sbjct: 403 FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDAL 462
Query: 274 LILDEMNQKG 283
+ EM+ KG
Sbjct: 463 QMYGEMSSKG 472
>Medtr4g108060.2 | PPR containing plant-like protein | HC |
chr4:44790940-44788813 | 20130731
Length = 449
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 9/187 (4%)
Query: 98 SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMS 157
GL P + SL+ LC + ++A+ + + +M G GL+ ++ +N +
Sbjct: 168 QGLKPNIV---TYNSLINGLCNNGKLEEAIDLWD------KMVGLGLKPNIVTYNALING 218
Query: 158 YCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPML 217
+C ++ A V + + L + TF+ ++ CK G+++ ++ M+++G+
Sbjct: 219 FCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN 278
Query: 218 YSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILD 277
ST+ C+I L R + A++ K D L L K + A +L+
Sbjct: 279 VSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN 338
Query: 278 EMNQKGL 284
EM GL
Sbjct: 339 EMFNLGL 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ L+ LCK +++ +A +++ M GL+ + +N + YC G L+AA
Sbjct: 317 YNILIDGLCKNDKSRNAEKLL------NEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 370
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
V R+E E + T++ L+ G CK ++ A ++ M+E G+
Sbjct: 371 VRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGL 415
>Medtr2g035450.1 | PPR containing plant-like protein | HC |
chr2:15110685-15106845 | 20130731
Length = 647
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 42 YDELAVEAGTSGDLNALRDILNKRFQDGCFN----------TKHTFSFITATNLTSTLI- 90
+ + E + + +LN Q+GCF+ ++FS I L+ L+
Sbjct: 123 FHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVI 182
Query: 91 ---------DDVVRTLSGLNP------GFTRKSAFESLVTRLCKLERADDALQVVESMAV 135
D V G++ G+T + +L+ LC R D+A+ +++ M V
Sbjct: 183 KALCRVGNVDQAVEVFRGMSDRNCVADGYT----YSTLMHGLCNEGRIDEAVSLLDEMQV 238
Query: 136 EGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACK 195
EG + A N+ + + C GDL A+ ++ + +G + T+++LV G C
Sbjct: 239 EGTFP------NPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCL 292
Query: 196 AGVVDGAIAVVRRMVED 212
G +D A++++ RMV +
Sbjct: 293 KGKLDKAMSLLNRMVAN 309
>Medtr2g036560.1 | PPR containing plant-like protein | HC |
chr2:15824637-15820871 | 20130731
Length = 849
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 15/123 (12%)
Query: 112 SLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVL 171
S+ R KLE+A + L V+ GL+ +L +N + Y GD A +L
Sbjct: 666 SMFVRNQKLEKAHEMLDVIHVS---------GLQPNLVTYNSLIDLYARVGDCWKAEEML 716
Query: 172 KRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRM 231
K I+N G++ D +++ ++ G CK G+V AI ++ M +GV C IT M
Sbjct: 717 KDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGV------QPCPITFNTFM 770
Query: 232 NCY 234
+CY
Sbjct: 771 SCY 773
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 10/170 (5%)
Query: 92 DVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
DV+ +SGL P ++ L R+ +A++ L+ +++ G+ D+ ++
Sbjct: 682 DVIH-VSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNS---------GISPDVVSY 731
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
N + +C G ++ A +L + G+ P TF+ + G+ A V+R M+E
Sbjct: 732 NTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIE 791
Query: 212 DGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGS 261
G T+ VI ++ +K+A + D + D Q L L S
Sbjct: 792 HGCMPNELTYKIVIDGYIKAKKHKEAMDFVSKIKEIDISFDDQSLKKLAS 841
>Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0177:26079-27820 | 20130731
Length = 524
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 14/159 (8%)
Query: 75 HTFSFITATNLTSTLIDDVVRTLS-----GLNPGFTRKSAFESLVTRLCKLERADDALQV 129
H+++ I ++D+ + + G+ P K + SL+ LCK ER A ++
Sbjct: 311 HSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPD---KVTYSSLIDGLCKSERISHAWEL 367
Query: 130 VESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDAL 189
++ M G+ A D+ + FL + C + ++ A ++K+I+++G+ + T++ L
Sbjct: 368 LDQMHARGQPA------DVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNIL 421
Query: 190 VLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+ G CK G + A + + ++ G + T+ +I L
Sbjct: 422 IDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGL 460
>Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29349925-29348099 | 20130731
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ +CK++ ++A + M +G + D+ ++ + +C G L A G
Sbjct: 199 YNTIIDSMCKVKLVNEAFDLYSEMVSKG------ISPDVVTYSALISGFCILGKLNDAIG 252
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ +E + D TF LV G CK G V A V+ M++ G+ T+ ++
Sbjct: 253 LFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYC 312
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ +A+ + T + Q + + +KKV EAM + EM+ K +
Sbjct: 313 LVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNI 367
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 10/236 (4%)
Query: 51 TSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRTLS-GLNPGFTRKSA 109
TS L LR + K Q + L + D +S G++P SA
Sbjct: 177 TSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSA 236
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
L++ C L + +DA+ + M E + D+ ++ + +C G ++ A
Sbjct: 237 ---LISGFCILGKLNDAIGLFNKMISEE------INPDVYTFSILVDGFCKEGRVKEAKN 287
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
VL + +G+ D T+ +L+ G C V+ A ++ M + GV ++ +I
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLP 285
++ +A + K+ D L L K+ A+ ++DEM+ +G+P
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403
>Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 14/253 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P Y L +N + +LN Q G H++ + ++D+ +
Sbjct: 311 PNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSL 370
Query: 97 LS-----GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
+ G+ P K + SL+ LCK R A ++V+ M G+ A ++ +
Sbjct: 371 FNDMQFKGIAPD---KVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPA------NIFTY 421
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
N + + C + ++ A ++K+I+++G+ D TF+ L+ G CK G + A V + ++
Sbjct: 422 NCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLS 481
Query: 212 DGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKE 271
G + T+ ++ L + + +A D L L + ++
Sbjct: 482 KGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEK 541
Query: 272 AMLILDEMNQKGL 284
A +L EM +GL
Sbjct: 542 AEKLLREMIARGL 554
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ LCK + DA ++ M + + D+ + + +C G LE A G
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKK------ISPDVVTFSALIYGFCIVGQLEEAFG 264
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ + + + + D TF+ LV CK G + GA ++ M+++GV T+ ++
Sbjct: 265 LFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+N +A+ + + + + +K V EA+ + ++M KG+
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGI 379
>Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC |
chr3:11989869-11995030 | 20130731
Length = 555
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 14/253 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P Y L +N + +LN Q G H++ + ++D+ +
Sbjct: 311 PNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSL 370
Query: 97 LS-----GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
+ G+ P K + SL+ LCK R A ++V+ M G+ A ++ +
Sbjct: 371 FNDMQFKGIAPD---KVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPA------NIFTY 421
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
N + + C + ++ A ++K+I+++G+ D TF+ L+ G CK G + A V + ++
Sbjct: 422 NCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLS 481
Query: 212 DGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKE 271
G + T+ ++ L + + +A D L L + ++
Sbjct: 482 KGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEK 541
Query: 272 AMLILDEMNQKGL 284
A +L EM +GL
Sbjct: 542 AEKLLREMIARGL 554
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ LCK + DA ++ M + + D+ + + +C G LE A G
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKK------ISPDVVTFSALIYGFCIVGQLEEAFG 264
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ + + + + D TF+ LV CK G + GA ++ M+++GV T+ ++
Sbjct: 265 LFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+N +A+ + + + + +K V EA+ + ++M KG+
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGI 379
>Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:27208394-27205502 | 20130731
Length = 958
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%)
Query: 135 VEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGAC 194
V RM GL + +N + SYC G++E A G+L +++ G+ + T++ L+ G C
Sbjct: 651 VCSRMIELGLAPNCVTYNTIINSYCIKGNIEDALGILIEMKSYGIMPNAVTYNILIGGLC 710
Query: 195 KAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQ 254
K G V A V+ M+ GV TH ++ R + L
Sbjct: 711 KTGDVQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKADTILQIHNKLIDMGLKLTLT 770
Query: 255 LLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ L + L L ++A ++LDEM ++G+
Sbjct: 771 VYNTLITVLCRLGMTRKAKVVLDEMVKRGI 800
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 26/264 (9%)
Query: 31 KPFPDHPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFI---------- 80
K + P + Y+ L +GD+ D+LN+ G T T F+
Sbjct: 691 KSYGIMPNAVTYNILIGGLCKTGDVQKAADVLNEMLVMGVVPTPITHKFLVKAYSRFKKA 750
Query: 81 -TATNLTSTLIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRM 139
T + + LID GL T + +L+T LC+L A V++ M G
Sbjct: 751 DTILQIHNKLID------MGLKLTLT---VYNTLITVLCRLGMTRKAKVVLDEMVKRGIS 801
Query: 140 AGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVV 199
A D +N + YC +E A ++ +G++ + T++ L+ G AG++
Sbjct: 802 A------DYVTYNALIRGYCTGSHVEKAFKTYLQMFVDGISPNITTYNTLLWGLSNAGLM 855
Query: 200 DGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCL 259
G +VR M E G +T+ +++ R+ +++ K+ R K T L
Sbjct: 856 KGTDKIVRGMKERGFVPNAATYDILVSGYGRVGNKEESTKFYREMLTKGFVPTTGTYNVL 915
Query: 260 GSKLMMLKKVKEAMLILDEMNQKG 283
+ ++ +A + +EM KG
Sbjct: 916 INCFAKAGRMHKAGELFNEMRTKG 939
>Medtr3g088505.3 | PPR containing plant-like protein | HC |
chr3:40228600-40232128 | 20130731
Length = 480
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 9/251 (3%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVR 95
P S Y L G +L R++ + GC T+ + + +D+ V
Sbjct: 197 EPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVE 256
Query: 96 TLSGLNPGFTRKSAF--ESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNM 153
+ ++ R ++F LV R +DA+ + M G A D+ +N
Sbjct: 257 VVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAA------DVVVYNA 310
Query: 154 FLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ ++C + L+ VLK +E+ G+A + RT + ++ G D A +V RRM++
Sbjct: 311 LIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLC 370
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
P T+ +I N A K + K L + L +A
Sbjct: 371 EPDA-DTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKAC 429
Query: 274 LILDEMNQKGL 284
++L+EM +KG+
Sbjct: 430 ILLEEMIEKGI 440
>Medtr3g088505.1 | PPR containing plant-like protein | HC |
chr3:40228600-40232138 | 20130731
Length = 480
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 9/251 (3%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVR 95
P S Y L G +L R++ + GC T+ + + +D+ V
Sbjct: 197 EPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVE 256
Query: 96 TLSGLNPGFTRKSAF--ESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNM 153
+ ++ R ++F LV R +DA+ + M G A D+ +N
Sbjct: 257 VVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAA------DVVVYNA 310
Query: 154 FLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ ++C + L+ VLK +E+ G+A + RT + ++ G D A +V RRM++
Sbjct: 311 LIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLC 370
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
P T+ +I N A K + K L + L +A
Sbjct: 371 EPDA-DTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKAC 429
Query: 274 LILDEMNQKGL 284
++L+EM +KG+
Sbjct: 430 ILLEEMIEKGI 440
>Medtr3g088505.2 | PPR containing plant-like protein | HC |
chr3:40228600-40232140 | 20130731
Length = 480
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 9/251 (3%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVR 95
P S Y L G +L R++ + GC T+ + + +D+ V
Sbjct: 197 EPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVE 256
Query: 96 TLSGLNPGFTRKSAF--ESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNM 153
+ ++ R ++F LV R +DA+ + M G A D+ +N
Sbjct: 257 VVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAA------DVVVYNA 310
Query: 154 FLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ ++C + L+ VLK +E+ G+A + RT + ++ G D A +V RRM++
Sbjct: 311 LIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLC 370
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
P T+ +I N A K + K L + L +A
Sbjct: 371 EPDA-DTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKAC 429
Query: 274 LILDEMNQKGL 284
++L+EM +KG+
Sbjct: 430 ILLEEMIEKGI 440
>Medtr3g088505.4 | PPR containing plant-like protein | HC |
chr3:40228600-40233968 | 20130731
Length = 480
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 9/251 (3%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVR 95
P S Y L G +L R++ + GC T+ + + +D+ V
Sbjct: 197 EPDSKTYSILLEGWGKEPNLPKAREVFGEMVSAGCNPDIVTYGIMVDILCKAGRVDEAVE 256
Query: 96 TLSGLNPGFTRKSAF--ESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNM 153
+ ++ R ++F LV R +DA+ + M G A D+ +N
Sbjct: 257 VVKEMDDNDCRPTSFIYSVLVHTYGVESRIEDAIDMFMEMEKNGIAA------DVVVYNA 310
Query: 154 FLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ ++C + L+ VLK +E+ G+A + RT + ++ G D A +V RRM++
Sbjct: 311 LIGAFCKANKLKNVHRVLKEMESNGIAPNSRTCNVIMSSLISQGETDKAFSVFRRMIKLC 370
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
P T+ +I N A K + K L + L +A
Sbjct: 371 EPDA-DTYTMLIKMFCERNEVDMALKIWKYMKSKQFVPSLHTFSVLINGLCAKGNAMKAC 429
Query: 274 LILDEMNQKGL 284
++L+EM +KG+
Sbjct: 430 ILLEEMIEKGI 440
>Medtr2g069680.1 | PPR containing plant-like protein | HC |
chr2:29048491-29050583 | 20130731
Length = 573
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 25/262 (9%)
Query: 30 AKPFPDHPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTL 89
A FP + + Y+ L G LN IL++ + G T+S +
Sbjct: 166 ANGFPTNTVT--YNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERG 223
Query: 90 IDDVVRTLSGL--NPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLD 147
+D+ ++ L + G ++ L+T LCK R +DA+++ + + +G +
Sbjct: 224 VDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKG------FKPC 277
Query: 148 LTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVR 207
+ +HN+ L S C+ G + A ++ ++ +G A T++ L+ G ++ A V+
Sbjct: 278 VVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLD 337
Query: 208 RMVEDGVPMLYSTHMCVITTL-------LRMNCYKQARKYARSFGGKDTTLDTQLLGCLG 260
M + G + +++ +I L L + C Q R F T + L C
Sbjct: 338 EMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQM--INRRFHLNGGTYNAIALLCER 395
Query: 261 SKLMMLKKVKEAMLILDEMNQK 282
VKEA LIL+ + +K
Sbjct: 396 G------MVKEAFLILERLGKK 411
>Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29098071-29100300 | 20130731
Length = 590
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Query: 108 SAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAA 167
S + L+ LC+ + +DA +V E + V+G LD+ A+ + + +C G A
Sbjct: 471 STYSILIKGLCQSGKLEDARKVFEDLLVKGY------NLDVYAYTIMIQGFCVEGLFNEA 524
Query: 168 AGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPM 216
+L ++E+ G D +T++ ++L K D A ++R M+ G+P+
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPL 573
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 84/187 (44%), Gaps = 9/187 (4%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
G++P SA L++ C L + DA+ + M +E ++ D+ N+ + ++
Sbjct: 255 GISPDVVTYSA---LISGFCILGKLKDAIDLFNKMILEN------IKPDVYTFNILVNAF 305
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
C G ++ V + +G+ + T+++L+ G C V+ A ++ M + GV
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 219 STHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDE 278
++ +I ++ + +A + K+ D L L ++ A+ ++D+
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 279 MNQKGLP 285
M+ +G+P
Sbjct: 426 MHDRGVP 432
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 76/175 (43%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ +CK++ ++A + M +G + D+ ++ + +C G L+ A
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKG------ISPDVVTYSALISGFCILGKLKDAID 281
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ E + D TF+ LV CK G + V M++ G+ + T+ ++
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ +A+ + D Q + + +KK EAM + EM++K +
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 98 SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMS 157
G+ P F + SL+ C ++ + A + +MA +G G+ D+ ++++ +
Sbjct: 324 QGIKPNFV---TYNSLMDGYCLVKEVNKAKSIFNTMA-QG-----GVNPDIQSYSIMING 374
Query: 158 YCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPML 217
+C + A + K + + + D T+ +L+ G K+G + A+ +V +M + GVP
Sbjct: 375 FCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPN 434
Query: 218 YSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILD 277
T+ ++ L + + +A F K D L L K+++A + +
Sbjct: 435 ICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFE 494
Query: 278 EMNQKG 283
++ KG
Sbjct: 495 DLLVKG 500
>Medtr6g017035.1 | PPR containing plant-like protein | HC |
chr6:6694817-6692735 | 20130731
Length = 448
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ L+ +CK + + +VE +M G+ + + +N+ + G+ A
Sbjct: 244 YNFLLRMICKRGDYERVVDLVE------KMKKIGVEPNGSTYNLLISCLFKIGNFAEACQ 297
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
VL+ +ENE + TFD ++ CK G +D A+ + +M GV TH VI
Sbjct: 298 VLETMENENGLSKEFTFDTIIRLLCKHGQIDLALKFIDKMTLKGVEPCSLTHAAVIKCYF 357
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL----P 285
+ Y +A +Y GK++ + L S V + IL EM KGL
Sbjct: 358 ELGKYDEAHEYVVVCAGKNSYSSNENYTLLASLHFKKGSVLLSQRILHEMMDKGLKPNYS 417
Query: 286 MGQKLKAFYLKNAGT 300
+ K++ ++ K T
Sbjct: 418 VYMKIRKYFEKKNKT 432
>Medtr6g080030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30060368-30059530 | 20130731
Length = 192
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 15/141 (10%)
Query: 108 SAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAA 167
S++ ++ CK+++ D+A+ + E M + + D+ +N + C SG + A
Sbjct: 11 SSYNIMINGFCKIKKVDEAMNLFEEMHCKNIIP------DVVTYNSLIDGICKSGKISYA 64
Query: 168 AGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV-PMLYSTHMCVIT 226
++ + + G D T+++++ CK VD AIA++ ++ + G+ P +Y TH +I
Sbjct: 65 LKLVDEMNDRGQLPDIITYNSILNALCKNHQVDKAIALLTKLKDQGIRPNIY-THTILID 123
Query: 227 TLLRM-------NCYKQARKY 240
L + NCY A Y
Sbjct: 124 GALALLSKMKDNNCYPNAVTY 144
>Medtr2g069680.2 | PPR containing plant-like protein | HC |
chr2:29048493-29050465 | 20130731
Length = 448
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 25/262 (9%)
Query: 30 AKPFPDHPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTL 89
A FP + + Y+ L G LN IL++ + G T+S +
Sbjct: 41 ANGFPTNTVT--YNTLVKGLCMYGKLNQSMQILDRLIKKGLVPNVVTYSILIEAAYKERG 98
Query: 90 IDDVVRTLSGL--NPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLD 147
+D+ ++ L + G ++ L+T LCK R +DA+++ + + +G +
Sbjct: 99 VDEAMKLLDDIIAKGGKPNLVSYNVLLTGLCKEGRTEDAIKLFKELPEKG------FKPC 152
Query: 148 LTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVR 207
+ +HN+ L S C+ G + A ++ ++ +G A T++ L+ G ++ A V+
Sbjct: 153 VVSHNILLRSLCYEGRWDEAYELMAGMDRDGQAPSVVTYNVLITSLSIDGRIEQAFKVLD 212
Query: 208 RMVEDGVPMLYSTHMCVITTL-------LRMNCYKQARKYARSFGGKDTTLDTQLLGCLG 260
M + G + +++ +I L L + C Q R F T + L C
Sbjct: 213 EMTKSGFKVSANSYNPIIARLCKEGRVDLVVQCLDQMIN--RRFHLNGGTYNAIALLCER 270
Query: 261 SKLMMLKKVKEAMLILDEMNQK 282
VKEA LIL+ + +K
Sbjct: 271 G------MVKEAFLILERLGKK 286
>Medtr4g076540.1 | PPR containing plant-like protein | HC |
chr4:29271058-29274509 | 20130731
Length = 834
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 108/249 (43%), Gaps = 14/249 (5%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
PT ++ + G +G ++ +D LN + G +T T++ I +D +
Sbjct: 532 PTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLA 591
Query: 97 L-----SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
SG++P + SL+ LCK + AL++ M +G ++LD+ A+
Sbjct: 592 YREMCESGISPDVI---TYTSLIDGLCKSNKIGLALEMHSDMKYKG------MKLDVVAY 642
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
+ + +C D+E+A+ + + GL + +++++ G ++ A+ + + M++
Sbjct: 643 SALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIK 702
Query: 212 DGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKE 271
+ VP + +I LL+ A KD D + L + L +++
Sbjct: 703 NKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLEN 762
Query: 272 AMLILDEMN 280
A IL EM+
Sbjct: 763 ASKILKEMD 771
>Medtr0652s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0652:1980-674 | 20130731
Length = 320
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 73 TKHTFSFITATN--LTSTLIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVV 130
T + FS+I N ++D+ + + ++ + SL+ LCK R A +++
Sbjct: 113 TPYVFSYIIIINGLCKIKMVDEALNLFTEMHCK-PNTVTYNSLIDGLCKSGRISHAWELL 171
Query: 131 ESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALV 190
+ M G+ A D+ +N FL + C + ++ A ++K+I+++G+ + T+ L+
Sbjct: 172 DQMHDRGQPA------DVITYNSFLHALCKNHQVDKAIALVKKIKDQGIQPNINTYSILI 225
Query: 191 LGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
G CK G ++ A + + ++ G + T+ +I L
Sbjct: 226 DGLCKEGRLENAQVIFQDLLIKGYKVTLWTYTIMINGL 263
>Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0237:19937-22785 | 20130731
Length = 679
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 6/135 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ S++ LCK D A+ ++ ++ G G+R D+ + + + C SG LE A
Sbjct: 545 TYNSILDALCKKHHVDKAITLLT------KLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
V + + +G D + ++ G C G+ D A+A++ +M E+G T+ +I +L
Sbjct: 599 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 658
Query: 229 LRMNCYKQARKYARS 243
+ A K R
Sbjct: 659 FEKDENDMAEKLLRE 673
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ +CK + +DA + S V R+ D+ +N + +C G L+ A
Sbjct: 336 YNTIIDGMCKDKHVNDAFDLY-SEKVSKRIFP-----DVFTYNALISGFCIVGKLKDAID 389
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ ++ + D TF LV G CK G + A V+ M++ + T+ ++
Sbjct: 390 LFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYC 449
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+N +A + + T + Q + + +K V EAM + EM+ K +
Sbjct: 450 LVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQI 504
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 98 SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMS 157
G+ P + + LV LC+ + +DA +V E + V+G LD+ A+ + +
Sbjct: 572 QGIRPDM---NTYTILVKGLCQSGKLEDARKVFEDLLVKGY------NLDVYAYTVMIQG 622
Query: 158 YCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
+C G + A +L ++E G D +T++ ++L + D A ++R M+ G+
Sbjct: 623 FCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679
>Medtr4g068360.1 | PPR containing plant-like protein | HC |
chr4:25633167-25630902 | 20130731
Length = 624
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 12/179 (6%)
Query: 109 AFESLVTRLC---KLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLE 165
F ++ LC K ++A D + G M +G++ ++ +N + YC G E
Sbjct: 219 TFNIMINILCREGKWKKAKDFI---------GHMEVYGVKPNVVTYNTVINGYCLRGKFE 269
Query: 166 AAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVI 225
AA+ + K ++++ L D T+++ + CK ++ A V+ +++E G+ T+ +I
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329
Query: 226 TTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+A Y + L L + K+++EA ++ EM +KG+
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGV 388
>Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:21460323-21462352 | 20130731
Length = 587
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%)
Query: 129 VVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDA 188
V E++++ M G++ L +N + C G+ + A +L + +G+ D +TF
Sbjct: 228 VSEALSLFAEMNEKGVKGSLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGVMPDVQTFTI 287
Query: 189 LVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKD 248
LV G CK G++ A +V+ MV+ GV T+ +I MN +A K R K
Sbjct: 288 LVDGFCKEGLILEAKSVISFMVQMGVEPNVVTYNSLIGGYCLMNEIDEAIKVFRLMVLKK 347
Query: 249 TTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
L +K V +AM +L+EM +GL
Sbjct: 348 CLPSVVTYNSLIHGWCKVKDVDKAMCLLNEMVNEGL 383
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 87/213 (40%), Gaps = 18/213 (8%)
Query: 77 FSFITAT-NLTSTLIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAV 135
F+FIT T N T+T+ +++ N ++ LC L A V+
Sbjct: 79 FTFITKTKNYTTTI--SLIKHAHSFNIN-ADTYTLNIVINCLCHLGHTKFAFSVL----- 130
Query: 136 EGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACK 195
+M GL+ + N + C G++ A + + +EN G + TF ALV G CK
Sbjct: 131 -SQMFKTGLKPTVVTLNTIVNGLCVEGNVARAVCLTREMENAGYEPNGYTFGALVNGLCK 189
Query: 196 AGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNC----YKQARKYARSFGGKDTTL 251
G + A+ +R MVE Y ++ V ++ C +A K
Sbjct: 190 IGDMVSAVGCIRDMVERN----YEPNVVVYNAIMDGFCKGGFVSEALSLFAEMNEKGVKG 245
Query: 252 DTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
CL + + + K+A +L+EM +KG+
Sbjct: 246 SLVTYNCLIQGVCSIGEWKKAYFLLNEMMEKGV 278
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Query: 144 LRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAI 203
L LD+ +N+ + C G L A VL R+ +GL D TF+ ++ G C+ G++D A
Sbjct: 453 LDLDIVIYNVMIDGLCKDGKLNDARKVLARLLVKGLRFDSYTFNIMIGGLCRKGLLDDAE 512
Query: 204 AVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLD---TQLL 256
++ +M E+G ++ + LLR +++KY + K +D T+LL
Sbjct: 513 DLLMKMEENGCQPNKCSYNIFVQGLLRKRDVLRSKKYLQIMKNKGFAVDATTTELL 568
>Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29834492-29835631 | 20130731
Length = 379
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 79/177 (44%), Gaps = 6/177 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ +L++ C + + DA+ + M +E + D+ N+ + ++C G ++ A
Sbjct: 79 TYNALISGFCIVGKLKDAIGLFNKMTLEN------INPDMYTFNILVDAFCKEGKMKEAK 132
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
VL + +G+ + T+ AL+ G C V+ A ++ M + GV ++ +I L
Sbjct: 133 NVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGL 192
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLP 285
++ +A + D L L L K+ A+ ++DEM+ +G+P
Sbjct: 193 CKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVP 249
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 79/177 (44%), Gaps = 7/177 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ +CK + +DA + M V R++ D+ +N + +C G L+ A G
Sbjct: 45 YNTIIDGMCKDKHVNDAFDLYSEM-VSKRISP-----DVFTYNALISGFCIVGKLKDAIG 98
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ E + D TF+ LV CK G + A V+ M++ G+ T+ ++
Sbjct: 99 LFNKMTLENINPDMYTFNILVDAFCKEGKMKEAKNVLAMMMKQGMKPNVVTYSALMDGYC 158
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMN-QKGLP 285
+ +A+ + D L + L +K EAM + +EM+ +K +P
Sbjct: 159 LVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGLCKIKMTDEAMNLFEEMHCRKIIP 215
>Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29908532-29910037 | 20130731
Length = 501
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ S++ LCK D A+ A+ ++ G G+R D+ + + + C SG LE A
Sbjct: 367 YNSILDALCKKHHVDKAI------ALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARK 420
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
V + + +G D + ++ G C G+ D A+A++ +M E+G T+ +I +L
Sbjct: 421 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 480
Query: 230 RMNCYKQARKYARS 243
+ A K R
Sbjct: 481 EKDENDMAEKLLRE 494
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 79/175 (45%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ S++ +CK + +DA + MA + R++ ++ ++ + +C G L+ A
Sbjct: 157 YSSIIDSMCKDKHVNDAFDLYSEMAAK-RISP-----NVVTYSALISGFCIVGKLKDAID 210
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ E + + TF LV G CK G V A V+ M++ G+ T+ ++
Sbjct: 211 LFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYC 270
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+N +A + + T + Q + + +K V EAM + EM+ K +
Sbjct: 271 LVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQI 325
>Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29114944-29118519 | 20130731
Length = 652
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/187 (19%), Positives = 85/187 (45%), Gaps = 9/187 (4%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
G++P SA L++ C L + +DA+ + M +E ++ D+ N+ + ++
Sbjct: 255 GISPDVVTYSA---LISGFCILGKLNDAIDLFNKMILEN------IKPDVYTFNILVNAF 305
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
C G ++ V + +G+ + T+++L+ G C V+ A ++ M + GV
Sbjct: 306 CKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDI 365
Query: 219 STHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDE 278
++ +I ++ + +A + K+ D L L ++ A+ ++D+
Sbjct: 366 QSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQ 425
Query: 279 MNQKGLP 285
M+ +G+P
Sbjct: 426 MHDRGVP 432
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/175 (19%), Positives = 75/175 (42%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ +CK++ ++A + M +G + D+ ++ + +C G L A
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKG------ISPDVVTYSALISGFCILGKLNDAID 281
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ E + D TF+ LV CK G + V M++ G+ + T+ ++
Sbjct: 282 LFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYC 341
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ +A+ + D Q + + +KK EAM + EM++K +
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNI 396
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 14/183 (7%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P Y L SG ++ ++++ G T T++ I +D +
Sbjct: 398 PDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIAL 457
Query: 97 LS-----GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
L+ G+ P + L+ LC+ + +DA +V E + V+G L++ +
Sbjct: 458 LTKLKDKGIQPNMY---TYSILIKGLCQSGKLEDARKVFEGLLVKGH------NLNVDTY 508
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
+ + +C G A +L ++E+ G D +T++ ++L K D A ++R M+
Sbjct: 509 TIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 568
Query: 212 DGV 214
GV
Sbjct: 569 RGV 571
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 88/203 (43%), Gaps = 18/203 (8%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFIT-------ATNLTSTL 89
P Y L G LN D+ NK + +TF+ + T+
Sbjct: 258 PDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTV 317
Query: 90 IDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLT 149
D +++ G+ P F + SL+ C ++ + A + +MA +G G+ D+
Sbjct: 318 FDMMMK--QGIKPNFV---TYNSLMDGYCLVKEVNKAKSIFNTMA-QG-----GVNPDIQ 366
Query: 150 AHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRM 209
++++ + +C + A + K + + + D T+ +L+ G K+G + A+ +V +M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426
Query: 210 VEDGVPMLYSTHMCVITTLLRMN 232
+ GVP T+ ++ L +++
Sbjct: 427 HDRGVPPTIRTYNSILDALCKIH 449
>Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:136046-137820 | 20130731
Length = 545
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCK D A+ +V+ + +G ++ ++ +N+ + C G L+ A
Sbjct: 410 TYSSLIDALCKNNHLDKAIALVKKIKDQG------IQPNMYTYNILIDGLCKGGRLKNAQ 463
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
V + + +G + + RT++ L+ G CK G+ D A A++ +M ++ + T+ +I +L
Sbjct: 464 DVFQDLLTKGYSLNIRTYNILINGLCKEGLFDKAEALLSKMEDNDINPNVVTYETIIRSL 523
Query: 229 LRMNCYKQARKYARS 243
+ ++A K R
Sbjct: 524 FYKDYNEKAEKLLRE 538
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCK R A ++V+ M V G+ D+ ++ + + C + L+ A
Sbjct: 375 TYNSLIDGLCKSGRISHAWKLVDEMHVNGQPP------DIFTYSSLIDALCKNNHLDKAI 428
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
++K+I+++G+ + T++ L+ G CK G + A V + ++ G + T+ +I L
Sbjct: 429 ALVKKIKDQGIQPNMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRTYNILINGL 488
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ + +A D + + L ++A +L EM +GL
Sbjct: 489 CKEGLFDKAEALLSKMEDNDINPNVVTYETIIRSLFYKDYNEKAEKLLREMVARGL 544
>Medtr7g118240.1 | PPR containing plant-like protein | HC |
chr7:49076181-49074826 | 20130731
Length = 451
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 12/199 (6%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P + Y+ L +GD++ + NK F+ ++ + + ++ V
Sbjct: 180 PDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDL 239
Query: 97 LSG-LNPGFTRKS-AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
LN GF S + +L+ LC+ ++ +A +++ M V+G D+ +N
Sbjct: 240 FEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKG------CNPDIVHYNTV 293
Query: 155 LMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
++ +C G A V+ ++ G + ++ LV G C G++D A V M+ G
Sbjct: 294 ILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKG- 352
Query: 215 PMLYSTHMCVITTLLRMNC 233
+S H VI L++ C
Sbjct: 353 ---FSPHFAVIHALVKGFC 368
>Medtr6g065560.1 | PPR containing plant-like protein | LC |
chr6:24273313-24271538 | 20130731
Length = 562
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ +CK + +DA + M V R+ D+ +N + +C G L+ A G
Sbjct: 244 YNTIIDSMCKDKLDNDAFDLYSEM-VSKRIFP-----DVNTYNALINGFCIVGKLKDAIG 297
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ +E + D TF+ LV CK G V A + M++ G+ T+ ++
Sbjct: 298 LFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYC 357
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+N +A+ + + T + + + ++ +K V +AM + EM+ K +
Sbjct: 358 LVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQI 412
>Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:41315621-41316712 | 20130731
Length = 348
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ LCK + +DA ++ M E + D+ N + +C G L+ A G
Sbjct: 20 YNTIIDGLCKDKLVNDAYELYSEMIAEK------ISPDVATFNSLIYGFCIIGQLKDAFG 73
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ + + TF LV G CK G + A +V+ M++DGV T+ ++
Sbjct: 74 LFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYC 133
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+N + + R+ +TQ + + +K V EA+++ EM +G+
Sbjct: 134 LVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGI 188
>Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:25449369-25454062 | 20130731
Length = 742
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
F LV CK + DA V +AV M G++L+ ++ + +C G L+ A
Sbjct: 280 TFNILVDGFCKEGKVKDAKVV---LAV---MMKAGVKLNAVTYSTLIRGFCIVGKLKEAV 333
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+ ++ + + TF LV CK +D A V+ M+E V T+ C++
Sbjct: 334 DLFNKMILGKVNPNVYTFTILVDAFCKEEKIDKANYVLNVMMEKDVTPNVITYSCLLYGY 393
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+N +A++ +S + T D + SK +K V EA + +EM K +
Sbjct: 394 CLVNEVNEAKRIFKSMTQRGVTFDVLSYTIMISKFCKIKMVDEARKLFEEMQSKQI 449
>Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC |
chr7:24639377-24633699 | 20130731
Length = 713
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ +++ LCK +R +VE+ + M G + + + + +C +GD+E
Sbjct: 166 SYNTVINGLCKGKR------LVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
G+L+ +E GL D + AL+ G C G ++ + M+ V T+ C++ L
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
+ +K+A + + G D L L + +A+ +LD M ++G
Sbjct: 280 CKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRG 334
>Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29875611-29877102 | 20130731
Length = 474
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ LCK + DDA + M V R++ D+ +N + +C G L+ A G
Sbjct: 206 YTAIINGLCKDKLVDDAFDLYTEM-VAKRVSP-----DVFTYNAMIYGFCVVGRLKDAIG 259
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ E + AD TF+ LV CK G V AVV M+++GV T+ ++
Sbjct: 260 LFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYC 319
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ +A+ + + T + + + + +K + EAM + EM+ K +
Sbjct: 320 LVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKVKMMDEAMNLFQEMHCKEI 374
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 6/177 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ +++ C + R DA+ + M +E A D N + ++C G++
Sbjct: 240 TYNAMIYGFCVVGRLKDAIGLFNDMKLENVEA------DEYTFNTLVSAFCKEGNVREGK 293
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
V+ + EG+ D T+++L+ G C VD A + MV+ GV ++ +I
Sbjct: 294 AVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGF 353
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLP 285
++ +A + K+ DT L ++ +A+ ++DEM+ +G P
Sbjct: 354 CKVKMMDEAMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQP 410
>Medtr4g091600.1 | PPR containing plant-like protein | HC |
chr4:36298713-36301989 | 20130731
Length = 870
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 98/227 (43%), Gaps = 18/227 (7%)
Query: 66 FQDGCFNTKHTFSFITATNLTSTLIDDVVRTLSGLNPGFTRKSAFES--LVTRLCKLERA 123
Q G +TF+ + + S +D ++ + + F LV C+ R
Sbjct: 143 IQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRT 202
Query: 124 DDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADP 183
AL+ V+ G+M G ++ +N + S+C + A +++R+ +GL D
Sbjct: 203 KQALEFVD-----GKMGG---NVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDV 254
Query: 184 RTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARS 243
TF++ + C+AG V A + R M DG L ++ +L+ C + + ARS
Sbjct: 255 VTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARS 314
Query: 244 F------GGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
GG +L++ LG L+ K+ E +LDEM + G+
Sbjct: 315 LVETMKKGGNFVSLESYNTWLLG--LLRNGKLLEGRSVLDEMVENGI 359
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 90/199 (45%), Gaps = 10/199 (5%)
Query: 36 HPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVR 95
+P + ++ L S L+ R++ +K + GC K T + + +
Sbjct: 148 NPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALE 207
Query: 96 TLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFL 155
+ G G + + +LV+ CK + D+A ++VE RM GL D+ N +
Sbjct: 208 FVDGKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVE------RMTEKGLLPDVVTFNSRI 261
Query: 156 MSYCFSGDLEAAAGVLKRIENEGLAADPR----TFDALVLGACKAGVVDGAIAVVRRMVE 211
+ C +G + A+ + + ++ +G P+ TF+ ++ G C+ G+++ A ++V M +
Sbjct: 262 SALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKK 321
Query: 212 DGVPMLYSTHMCVITTLLR 230
G + ++ + LLR
Sbjct: 322 GGNFVSLESYNTWLLGLLR 340
>Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35612850-35609750 | 20130731
Length = 1023
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
LV + E+AD LQ+ E ++ GL L LT +N + +C G A VL
Sbjct: 746 LVKAYSRSEKADKILQIHE------KLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLD 799
Query: 173 RIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
+ G++AD T++AL+ G C V+ A+ +M DG+
Sbjct: 800 EMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGI 841
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
A+ +L+ L +L + D V RM GL D +N + +YC G E A
Sbjct: 638 AYNALIKGLLRLGKYDPRY-------VCSRMIELGLAPDCITYNTIINTYCIKGKTEDAL 690
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRM-VEDGVPMLYSTHMCVITT 227
+L +++ G+ + T++ L+ G CK G V+ A + + M V + VP TH ++
Sbjct: 691 DILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPI-THKFLVKA 749
Query: 228 LLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
R + + L + L + L ++A ++LDEM ++G+
Sbjct: 750 YSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGI 806
>Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:29740887-29742940 | 20130731
Length = 653
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 79/178 (44%), Gaps = 18/178 (10%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F ++ LC+L+R ++A + M +G+ + +N+ + S C G+ +
Sbjct: 489 FSCIIDGLCRLKRTEEAFECF------NEMVEWGVNPNAIIYNILIRSLCSIGETTRSVK 542
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+L+R++ EG++ D +++AL+ C+ V+ A + M + G T+ I L
Sbjct: 543 LLRRMQEEGISPDIYSYNALIQIFCRMNKVEKAKKLFDSMSKSGFNPDNYTYSAFIAALS 602
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPMG 287
++A+K S + D+ +V+EA I++ QKG+ +
Sbjct: 603 ESGRLEEAKKMFYSMEANGCSPDS------------YDRVEEAQKIVERCRQKGIALN 648
>Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:41923424-41925949 | 20130731
Length = 776
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 104/272 (38%), Gaps = 24/272 (8%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
PT+ Y+ + + + R + ++ Q TF+ + ID+ R
Sbjct: 187 PTTYVYNLVLGGLCKAKKIKDARKVFDEMIQRNVVPNTVTFNTLIDGYCKVGGIDEAFRL 246
Query: 97 LSGLNPGFTRKSA--FESLVTRLCKLERADDALQVVESMAVEGRMA-------------- 140
+ +N +++ + + L++ LC L R +DA +V+ M +G +
Sbjct: 247 RARMNGPYSKANVVTYNCLLSGLCGLGRLEDAKRVLLEMERKGFLPRGFSSLVFDDQLMS 306
Query: 141 --------GFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLG 192
G G ++D N L C G +E A +L ++E+ G+ P +++ LV
Sbjct: 307 GNENGLLNGNGTQVDEWTCNALLNGLCKVGKVEKAKEILAKLESNGVVPSPVSYNILVNA 366
Query: 193 ACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLD 252
C+ G ++ I M + G+ Y T +I QA ++ + K +
Sbjct: 367 YCQKGDLNKGILTAEEMEKRGLKPSYVTFNTLINKFCETGDLNQAERWVKKMIEKGVSPT 426
Query: 253 TQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ L + M I +E+ KG+
Sbjct: 427 LETYNSLINGYGMTCDFVRCFEIFEEIENKGM 458
>Medtr5g029690.1 | PPR containing plant-like protein | HC |
chr5:12486752-12480740 | 20130731
Length = 722
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 23/186 (12%)
Query: 49 AGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATN---------LTSTLIDDVVRTLSG 99
G S D+ +IL K + G T + ++ T + LI ++ R
Sbjct: 191 VGCSVDIRRASEILGKIYMSG--ETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQP 248
Query: 100 LNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYC 159
LN F +++ LC+ D+A +V + M G + D+ ++++ + +C
Sbjct: 249 LN-----NHCFNAVIYGLCQGGILDEASEVFKEMKNSGILP------DVYSYSILIDGFC 297
Query: 160 FSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV-PMLY 218
G ++ A+ V K + N G+ + ++ L+ G CK G VD A+ V M G+ P +Y
Sbjct: 298 RKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVY 357
Query: 219 STHMCV 224
S + +
Sbjct: 358 SYSILI 363
>Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29881712-29885144 | 20130731
Length = 457
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ S++ LCK D A+ A+ ++ G G+R D+ + + + C SG LE A
Sbjct: 255 YNSILDALCKKHHVDKAI------ALLTKLKGQGIRPDMNTYTILVKGLCRSGKLEDARK 308
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
V + + +G D + ++ G C G+ D A+A++ +M E+G T+ +I +L
Sbjct: 309 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 368
Query: 230 RMNCYKQARKYARS 243
+ A K R
Sbjct: 369 EKDENDMAEKLLRE 382
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ S++ +CK + +DA + MA + + ++ ++ + +C G L+ A
Sbjct: 45 YSSIIDSMCKDKHVNDAFDLYSEMAAKR------ISPNVVTYSALISGFCIVGKLKDAID 98
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ E + + TF LV G CK G V A V+ M++ G+ T+ ++
Sbjct: 99 LFNKMILENINPNVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYSSLMDGYC 158
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+N +A + + T + Q + + +K V EAM + EM+ K +
Sbjct: 159 LVNEVNKAESIFNTMSHRGVTANVQSYSIMINGFCKIKMVDEAMKLFKEMHHKQI 213
>Medtr6g022260.1 | PPR containing plant-like protein | HC |
chr6:7759035-7757320 | 20130731
Length = 571
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ L+ LC++++ +A+++ R+ GLR ++ +N + YC + ++ A
Sbjct: 307 YNLLINGLCRMKKLGEAVKLFY------RVNRVGLRPNIFTYNTLIKGYCDAEKIDTAVR 360
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ +++ GL+ T++ L+ G K G + GA+ +V+ M E + T+ ++ +
Sbjct: 361 LYNELKSNGLSPTVVTYNTLIAGYSKVGNLAGALNLVKEMEERNIAPTKVTYTILLNGFV 420
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLI---LDEMNQK 282
R+N ++A + D G L L M +KEA + LDE+N +
Sbjct: 421 RINYMEKAFEIHSLMEKSGLVSDVYTYGVLIHGLCMNGSMKEASKLFKSLDELNME 476
>Medtr8g089700.1 | PPR containing plant-like protein | HC |
chr8:37340479-37337578 | 20130731
Length = 515
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 73 TKHTFS-FITATNLTST--LIDDVVRTLS--GLNPGFTRKSAFESLVTRLCKLERADDAL 127
T T+S FITA LI+ ++R + G+ P AF + LC+ R + AL
Sbjct: 79 TPFTYSRFITALCSVKNFLLIESLLRDMDDLGIVPDIW---AFNIYLNILCRENRLETAL 135
Query: 128 QVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFD 187
Q+ ++M ++GR + D+ ++ + + + C + V +++ + GL D +
Sbjct: 136 QLFQTMPLKGR------KPDVVSYTIIIDALCKVKRFDEVVHVWRKLIDSGLKPDFKVCA 189
Query: 188 ALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARK 239
ALV+G C G VD A +V ++ GV + C++ L YK +K
Sbjct: 190 ALVVGLCSGGYVDLAYELVVGVISGGVEV-----NCLVYNALIHGFYKMGKK 236
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 12/206 (5%)
Query: 103 GFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSG 162
G ++ +++ CK+ R + A ++ E M +G ++ D+ + + ++ G
Sbjct: 320 GVCDAVSYNTIIVAFCKVRRTERAYELYEEMCRKG------IQPDVVTFTVLIKAFLRKG 373
Query: 163 DLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHM 222
A +L ++ + D + +V CK+G +D A V MVE+GV ++
Sbjct: 374 GSNVANKLLVEMKAMRIVPDVIFYTTVVDHQCKSGNIDKAYGVFCDMVENGVSPDVVSYN 433
Query: 223 CVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQK 282
+I + + A + K D + L+ K+ EA + D+M +K
Sbjct: 434 AIINGFCKASRVMGAWRLYEEMQVKGLDPDEVTFNLIVGVLIQGNKISEAYRVWDQMMEK 493
Query: 283 GLPMGQKLKAFYLKNAGTVNGVKGRN 308
G + L VN V+ R+
Sbjct: 494 GFTLNGDLSNI------LVNAVQSRD 513
>Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCK + D A+ +V+ + +G ++ D+ +N+ + C G L A
Sbjct: 415 TYNSLIDALCKNHQIDKAIALVKKIKDQG------IQPDMCTYNILIDGLCKGGRLHNAR 468
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
V + + +G + D +T++ ++ G CK G+ D A ++ +M ++G+ T+ +I
Sbjct: 469 DVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAF 528
Query: 229 LRMNCYKQARKYARS 243
+ ++A K R
Sbjct: 529 FHKDENEKAEKLLRE 543
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ ++ LCK++ D+AL + M G + + ++ + C SG A
Sbjct: 345 SYSIMINGLCKVKMVDEALSLFYEMRCRG------IAPNTVTYSSLIDGLCKSGRYSYAW 398
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
++ + + G + T+++L+ CK +D AIA+V+++ + G+ T+ +I L
Sbjct: 399 DLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGL 458
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ AR + K +LD Q + + L + EA ++L +M G+
Sbjct: 459 CKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGI 514
>Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCK + D A+ +V+ + +G ++ D+ +N+ + C G L A
Sbjct: 415 TYNSLIDALCKNHQIDKAIALVKKIKDQG------IQPDMCTYNILIDGLCKGGRLHNAR 468
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
V + + +G + D +T++ ++ G CK G+ D A ++ +M ++G+ T+ +I
Sbjct: 469 DVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAF 528
Query: 229 LRMNCYKQARKYARS 243
+ ++A K R
Sbjct: 529 FHKDENEKAEKLLRE 543
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ ++ LCK++ D+AL + M G + + ++ + C SG A
Sbjct: 345 SYSIMINGLCKVKMVDEALSLFYEMRCRG------IAPNTVTYSSLIDGLCKSGRYSYAW 398
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
++ + + G + T+++L+ CK +D AIA+V+++ + G+ T+ +I L
Sbjct: 399 DLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGL 458
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ AR + K +LD Q + + L + EA ++L +M G+
Sbjct: 459 CKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGI 514
>Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0019:127328-125664 | 20130731
Length = 554
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCK + D A+ +V+ + +G ++ D+ +N+ + C G L A
Sbjct: 415 TYNSLIDALCKNHQIDKAIALVKKIKDQG------IQPDMCTYNILIDGLCKGGRLHNAR 468
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
V + + +G + D +T++ ++ G CK G+ D A ++ +M ++G+ T+ +I
Sbjct: 469 DVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGIIPDAVTYETIIRAF 528
Query: 229 LRMNCYKQARKYARS 243
+ ++A K R
Sbjct: 529 FHKDENEKAEKLLRE 543
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ ++ LCK++ D+AL + M G + + ++ + C SG A
Sbjct: 345 SYSIMINGLCKVKMVDEALSLFYEMRCRG------IAPNTVTYSSLIDGLCKSGRYSYAW 398
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
++ + + G + T+++L+ CK +D AIA+V+++ + G+ T+ +I L
Sbjct: 399 DLVDEMHDHGHPPNIFTYNSLIDALCKNHQIDKAIALVKKIKDQGIQPDMCTYNILIDGL 458
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ AR + K +LD Q + + L + EA ++L +M G+
Sbjct: 459 CKGGRLHNARDVFQDLLIKGYSLDVQTYNIMINGLCKVGLFDEAEVLLSKMEDNGI 514
>Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:19488986-19490777 | 20130731
Length = 545
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 83/185 (44%), Gaps = 9/185 (4%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
G+ P ++ ++ LCK++ D+A+ + E M + LD+ ++ +
Sbjct: 333 GMTPDI---QSYTIMINGLCKMKMLDEAVSLFE------EMHSTNMTLDVITYSSLINGL 383
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
C SG L +A + + + G D T+++L+ CK+ D AIA++ +M + G+
Sbjct: 384 CKSGRLISAWKLFDEMLDRGQPPDVITYNSLLDALCKSHQTDKAIALLSKMKDQGIQADI 443
Query: 219 STHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDE 278
T+ +I L + A+K R K +D + + L + EA+ +L +
Sbjct: 444 FTYNILIDGLCKDGRLDDAQKIFRDLLIKSYNVDVVTYNVMINGLCKESLLDEALTLLSK 503
Query: 279 MNQKG 283
M KG
Sbjct: 504 MEAKG 508
>Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:105937-104291 | 20130731
Length = 548
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 6/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCK R A ++V+ M V G+ ++ ++ + + C + L+ A
Sbjct: 378 TYSSLIDGLCKSGRFSCAWELVDEMHVNGQPP------NIFTYSSLIDALCKNNHLDKAM 431
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
++K+I+++G+ D T++ L+ G CK G + A V + ++ G + ++ +I L
Sbjct: 432 TLVKKIKDQGIQPDMYTYNILIDGLCKGGRLKNAQDVFQDLLTKGYSLNIRSYNILINGL 491
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ + +A G D D + L + ++A +L EM +GL
Sbjct: 492 CKDGLFDKAEALLSKMKGNDVIPDAVTYETIIHSLFYKDENEKAEKLLREMLGRGL 547
>Medtr1g033960.1 | PPR containing plant-like protein | HC |
chr1:12282466-12279095 | 20130731
Length = 745
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ +++ LC R ++ ++V+E M+++G L D +N + +C G+ A
Sbjct: 266 SYNAVINGLCGQGRMNETMEVIEEMSLKG------LSPDCVTYNTLVNGFCKDGNFHQAL 319
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+L + +GL+ + T+ L+ G CK + A+ ++ M + G+ T+ ++
Sbjct: 320 VLLHEMSGKGLSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGF 379
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
R +A K L + L +V+EA+ +L +M ++GL
Sbjct: 380 CRQGLMNEAYKVLSEMVDSGFVPSVVTYNALVNGFCCLGRVEEAVGVLKDMVERGL 435
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 12/133 (9%)
Query: 84 NLTSTLIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFG 143
N T +I+++ +L GL+P + +LV CK AL ++ M+G G
Sbjct: 281 NETMEVIEEM--SLKGLSPDCV---TYNTLVNGFCKDGNFHQALVLLH------EMSGKG 329
Query: 144 LRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAI 203
L ++ + + C +L A +L + + GL+ + RT+ LV G C+ G+++ A
Sbjct: 330 LSPNVVTYTTLINGMCKVKNLSRAMEILSLMRDRGLSPNERTYTTLVDGFCRQGLMNEAY 389
Query: 204 AVVRRMVEDG-VP 215
V+ MV+ G VP
Sbjct: 390 KVLSEMVDSGFVP 402
>Medtr1g011520.1 | PPR containing plant-like protein | HC |
chr1:2060030-2064273 | 20130731
Length = 587
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 60/113 (53%), Gaps = 9/113 (7%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +LV C++ R + AL++V G M G++ + +N + + +G + A G
Sbjct: 292 YGTLVEGYCRMRRVEKALEMV------GEMTKEGIKPNAIVYNPIIDALAEAGRFKEALG 345
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG---VPMLYS 219
+++R + T+++LV G CKAG ++GA ++++M+ G +P Y+
Sbjct: 346 MMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYN 398
>Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:15064091-15060484 | 20130731
Length = 545
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 55 LNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRTLSGLNPG--FTRKSAFES 112
+N + + N Q G ++S + ++D+ ++ ++ F + S
Sbjct: 319 VNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNS 378
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
LV LCK R AL++V+ M G+ + ++ +N L + C + ++ A +L
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPS------NIITYNSILDAICKNNHVDKAIVLLT 432
Query: 173 RIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMN 232
+I+ +G+ D T+ L+ G CK G +D A +++ ED + YS ++ T+L+
Sbjct: 433 KIKEKGIQPDIFTYTVLINGLCKVGRLDDA----QKVFEDLLVKGYSPNIYTYTSLINGF 488
Query: 233 CYK 235
C K
Sbjct: 489 CNK 491
>Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29104928-29106782 | 20130731
Length = 498
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 37/266 (13%)
Query: 50 GTSGDLNALRDILNKRFQDGCFNT--KHTFSFITATNLTSTLIDDVVRTLSGLNPGFTRK 107
G + +L L ++N CF+ ++ SF N+ D V TL+ L G K
Sbjct: 90 GIASNLVTLNILIN------CFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLK 143
Query: 108 SAFESLVTRLCKLERADDALQ-------------------VVESMA----------VEGR 138
++ +L+ LCK+ +A ALQ +++SM +
Sbjct: 144 VSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 203
Query: 139 MAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGV 198
M G+ D+ ++ + + G L+ A + ++ E + D TF+ LV G CK G
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 199 VDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGC 258
+ V M++ G+ T+ ++ + +A + DTQ
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323
Query: 259 LGSKLMMLKKVKEAMLILDEMNQKGL 284
+ + +KKV EAM + +M+ K +
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNI 349
>Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35125926-35130110 | 20130731
Length = 608
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 12/175 (6%)
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
++ LC L+ V +V G M GL + + + C GD+ A ++
Sbjct: 133 VINSLCHLKL------VAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVD 186
Query: 173 RIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE-DGVP--MLYSTHMCVITTLL 229
+E G +D +T+ L+ G CK G A+ +R+M E + P ++YST V+ L
Sbjct: 187 HVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYST---VMDGLC 243
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ +A GK + CL L + KEA +LDEM + G+
Sbjct: 244 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGV 298
>Medtr3g100600.1 | PPR containing plant-like protein | HC |
chr3:46279117-46276932 | 20130731
Length = 550
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 85/197 (43%), Gaps = 5/197 (2%)
Query: 92 DVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
+VV+ + + + +L+ LC+ R +A ++ E M + ++ D +
Sbjct: 258 EVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVP-----DPLTY 312
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
N+ + +C G + A V++ ++N G + + ALV G CKAG + A V+ M
Sbjct: 313 NVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKS 372
Query: 212 DGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKE 271
G+ T+ +I R +A + D DT + L + E
Sbjct: 373 SGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDE 432
Query: 272 AMLILDEMNQKGLPMGQ 288
A+ +++++ Q+G+ + +
Sbjct: 433 ALDMIEKLPQQGVYLNK 449
>Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29865926-29867095 | 20130731
Length = 389
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ +L++ C + + DA+ + M +E + D+ N+ + ++C G ++ A
Sbjct: 79 TYNALISGFCIVGKLKDAIGLFNKMTLEN------INPDMYTFNILVDAFCKEGKMKEAK 132
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
VL + +G+ + T+ AL+ G C V+ A ++ M + GV ++ +I L
Sbjct: 133 NVLAMMMKQGMKPNVVTYSALMDGYCLVKKVNKAKSIFNTMAQGGVNPDIHSYSILINGL 192
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLP 285
++ +A + D L L K+ A+ ++DEM+ +G+P
Sbjct: 193 CKIKMTDEAMNLFEEMHCRKIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 249
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
G+NP ++ L+ LCK++ D+A+ + E M + D+ +N +
Sbjct: 177 GVNPDI---HSYSILINGLCKIKMTDEAMNLFEEMHCRKIIP------DVVTYNSLIDGL 227
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV-PML 217
C SG + A ++ + + G+ D T+ +++ CK VD AIA++ + + G+ P +
Sbjct: 228 CKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTNLKDQGIRPNM 287
Query: 218 YS 219
Y+
Sbjct: 288 YT 289
>Medtr4g108650.1 | PPR containing plant-like protein | HC |
chr4:44994513-44997905 | 20130731
Length = 850
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 9/186 (4%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
GL P + +L+ LC+ ALQ++ MA +G + D+ +N+ +
Sbjct: 386 GLRPSII---VYNTLIKGLCQQGLILPALQLMNEMAEKG------CKPDIWTYNLIINGL 436
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
C G L A ++ +G D T++ LV G C+ +D AI +V RM G+
Sbjct: 437 CKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDV 496
Query: 219 STHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDE 278
T+ ++ L + ++ + ++ K + + L KKV EA+ +L E
Sbjct: 497 ITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGE 556
Query: 279 MNQKGL 284
M KGL
Sbjct: 557 MKSKGL 562
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 31/194 (15%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKH-------TFSFITATNLTSTL 89
P +E+A E G D+ I+N + GC + + T I +TL
Sbjct: 409 PALQLMNEMA-EKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTL 467
Query: 90 IDDVVRTL--------------SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAV 135
+D R L G+ P + +L+ LCK ++++ +++ ++M
Sbjct: 468 VDGYCRQLKLDSAIELVNRMWSQGMTPDVI---TYNTLLNGLCKTAKSEEVMEIFKAMTE 524
Query: 136 EGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACK 195
+G ++ +N + S C S + A +L ++++GL D +F L+ G CK
Sbjct: 525 KGCAP------NIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCK 578
Query: 196 AGVVDGAIAVVRRM 209
G +DGA + R M
Sbjct: 579 VGDLDGAYGLFRGM 592
>Medtr5g031740.1 | PPR containing plant-like protein | HC |
chr5:13615116-13619806 | 20130731
Length = 894
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 11/253 (4%)
Query: 33 FPDHPTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDD 92
FPD PT E G + AL+ + ++G +T++ + +D+
Sbjct: 292 FPDVPTYTVLVAAFCEVGKETE--ALK-FFEEMVENGIEPNVYTYTVLIDYFCKVGKMDE 348
Query: 93 VVRTLSG-LNPGFTRKSA-FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTA 150
+ LS L G F +L+ CK +DA+ V++SM + +
Sbjct: 349 GMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCP------NSRT 402
Query: 151 HNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMV 210
+N + +C ++ A +L ++ L+ + T++ L+ G CKA VVD A + M+
Sbjct: 403 YNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMI 462
Query: 211 EDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVK 270
+DG T I L +M +QA + S K + L L +K
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFS 522
Query: 271 EAMLILDEMNQKG 283
+A L+ M +G
Sbjct: 523 DAHLLFKRMLFEG 535
>Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30153173-30230234 | 20130731
Length = 514
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCK R D +++ M ++ G++ D+ +++ + C SG + A
Sbjct: 372 TYNSLIDGLCKSGRISDVWYLIDEMQIKD----LGVKPDVYTYSILIDRLCKSGRIADAW 427
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV-PMLYSTHMCV 224
++ + + G A+ T+ +L+ G CK +D AIA+ +M + GV P +Y+ ++ +
Sbjct: 428 YLIDEMHDRGQPANVVTYTSLIDGLCKNHNLDKAIALFTKMKDLGVEPNVYTYNILI 484
>Medtr1g114190.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:51530247-51524816 | 20130731
Length = 1419
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F L+ LCK+ R +A + + G L + +N+F+ +C +G+++ A
Sbjct: 593 FNVLIRGLCKVNRFTEAEDLFHELVKRG------LSPSVVTYNLFIDCWCKNGNVDKAMA 646
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
L R+ E T+ LV G CK D AI + + M ++G P T M +I L
Sbjct: 647 HLFRMTKEDKVPSVVTYTTLVDGFCKEERPDDAILLFKEMEKNGCPPNQITFMALIYGLC 706
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ +A Y R K+ D+ + L S + + A I EM G
Sbjct: 707 KCCRPTEALCYLREMQQKEMKPDSFIYVALLSAYLSDLNLTSAFEIFREMVDLGF 761
>Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29367679-29365974 | 20130731
Length = 559
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
G+NP ++ ++ CK+++ D+A+ + + M + D+ +N +
Sbjct: 347 GVNPNI---HSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP------DVVTYNSLIDGL 397
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
C G + A ++ + + G+ D T+++++ CK VD AIA++ +M ++G+
Sbjct: 398 CKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI---- 453
Query: 219 STHMCVITTLL 229
+C TTL+
Sbjct: 454 QPDICTYTTLV 464
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 107 KSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEA 166
K + S++ LCK + D A+ ++ M EG ++ D+ + + C +G LE
Sbjct: 422 KITYNSILDALCKNHQVDKAIALLTKMKDEG------IQPDICTYTTLVDGLCKNGRLED 475
Query: 167 AAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVIT 226
A V + + +G D + A++ G C G+ D ++ ++ +M E+G T+ +I
Sbjct: 476 ARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIIC 535
Query: 227 TLLRMNCYKQARKYARS 243
+L + +A K R
Sbjct: 536 SLFDKDENDKAEKLLRE 552
>Medtr5g024320.1 | PPR containing plant-like protein | HC |
chr5:9792166-9790250 | 20130731
Length = 620
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 6/102 (5%)
Query: 113 LVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLK 172
+V LC R +A +V+E R+ G LD A+N + +C G ++ LK
Sbjct: 284 VVEILCNAGRVTEAAEVLE------RVESLGGSLDAVAYNTLIKGFCGVGKVKVGLHFLK 337
Query: 173 RIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
++EN+G + T++ L+ G C++ ++D A+ + M DG+
Sbjct: 338 QMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGI 379
>Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30027878-30029913 | 20130731
Length = 619
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 88/204 (43%), Gaps = 24/204 (11%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTL-----ID 91
P + Y+ L SG ++ + D++++ G + IT T+L L +D
Sbjct: 375 PNTVTYNSLIYGLCKSGRISYVLDLIDEMCDRG-----QAANVITYTSLMDALCKNHNLD 429
Query: 92 DVVRTLS-----GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRL 146
+ + G+ P + L+ RLCK R DA +++ M G+ A
Sbjct: 430 KAIALFTKMKDLGVEPNV---YTYNILIDRLCKSGRIADAWYLIDEMHDRGQPA------ 480
Query: 147 DLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVV 206
++ + + C + +L+ A +I + G+ AD T+ L+ G CK G + A+ V
Sbjct: 481 NVVTYTSLIDGLCKNHNLDKAIEFFTKINDWGIQADVHTYTVLIDGLCKGGRLKNALEVF 540
Query: 207 RRMVEDGVPMLYSTHMCVITTLLR 230
R ++ G + T+ +I+ L +
Sbjct: 541 RILLIKGYHLDVLTYTVMISGLCK 564
>Medtr8g039270.1 | PPR containing plant-like protein | HC |
chr8:14611328-14608322 | 20130731
Length = 731
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 9/186 (4%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
GL PG + S++ +LC R DA +++ M+ A D N + +Y
Sbjct: 333 GLYPGVV---TYNSILRKLCSDGRIRDANKLLHEMSERKVQA------DSVTCNTLINAY 383
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
C GDL +A ++ GL + T+ AL+ G CK ++ A ++ M++ G Y
Sbjct: 384 CKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNY 443
Query: 219 STHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDE 278
T+ ++ + + + F K L+ L L +L +++++ A +L
Sbjct: 444 RTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYH 503
Query: 279 MNQKGL 284
M KG+
Sbjct: 504 MEGKGI 509
>Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29212418-29210681 | 20130731
Length = 465
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 14/182 (7%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P Y L T G L D+ NK + +TF+ + S I ++
Sbjct: 260 PNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKL 319
Query: 97 LS-----GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAH 151
+ G P + S++ LCK R D A+ A+ ++ G+R ++ +
Sbjct: 320 VDEMHDRGQPPNIV---TYSSILDALCKTHRVDKAV------ALLTKLKDQGIRPNMHTY 370
Query: 152 NMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVE 211
+ + C SG LE A + + + +G T+ + G CK G+ D A A++ +M E
Sbjct: 371 TILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEE 430
Query: 212 DG 213
+G
Sbjct: 431 NG 432
>Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3104228-3097978 | 20130731
Length = 738
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 71/181 (39%), Gaps = 6/181 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ + + LCK R+D V++ + A+ + +C L+ A
Sbjct: 262 CYATFIEGLCKNNRSDLGYAVLQDYRTRNA------HVHKYAYTAVIRGFCNETKLDEAE 315
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
V +E +GL D + ALV G C + D A+AV + M+ G+ C++ L
Sbjct: 316 SVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCL 375
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPMGQ 288
M + F +D + L L L KV +A+ +LDE+ L +
Sbjct: 376 DEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDM 435
Query: 289 K 289
K
Sbjct: 436 K 436
>Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0308:7816-9441 | 20130731
Length = 541
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 6/177 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
F SL+ C + + DA ++ M ++ + ++ N+ + + C G ++ A
Sbjct: 231 TFSSLIYGFCIVGQFKDAFRLFNEMVLKN------INPNVYTFNILVDALCKEGKMKEAK 284
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
VL + +G+ D T +L+ G C V+ A A+ MV+ GV + VI L
Sbjct: 285 NVLAMMVKQGVKPDIVTHTSLMDGYCLVNEVNKAKALFNTMVQRGVMPNVHCYSVVINGL 344
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLP 285
+ +A + + K +T L L ++ A +LDEM+ +G P
Sbjct: 345 CKNKLIDEAMDFFKEMQSKKIIPNTVTYSSLIDGLCKSGRISHAWELLDEMHDRGQP 401
>Medtr1g095880.1 | PPR containing plant-like protein | HC |
chr1:43173038-43169315 | 20130731
Length = 769
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ +L+ K E+AD AL++ E M G +A + +N + C SG + A
Sbjct: 493 TYGTLIMGYFKDEQADRALKLWEEMKETGIVA------TIITYNTIIRGLCLSGKTDQAV 546
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV-PMLYSTHMCVITT 227
L + +GL D T + ++ G C G V+ A +MVE + P +++ ++ ++
Sbjct: 547 DKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNI-LLRG 605
Query: 228 LLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
L R ++ ++ K +DT + S +++++A ++ EM K L
Sbjct: 606 LCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNL 662
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 85/204 (41%), Gaps = 25/204 (12%)
Query: 98 SGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMS 157
SGL P ++ + LV CKL+ +A +V+E M G G+ D+ +N +
Sbjct: 275 SGLFPN---RNTYNILVHGYCKLKWLKEAAEVIE------LMTGKGMLPDVWTYNTMVRG 325
Query: 158 YCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPML 217
C G ++ A + ++E+ L D T++ L+ G + D A +V M GV
Sbjct: 326 LCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKEN 385
Query: 218 YSTHMCVITTLLRMNCYKQA-----RKYARSFGGKDTTLDTQLLG-CLGSKLMMLKKVKE 271
TH +I +A + F T +T + G C K+ E
Sbjct: 386 GVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKM------AE 439
Query: 272 AMLILDEMNQKGLPMGQKLKAFYL 295
A ++DEM +KGL KL F L
Sbjct: 440 AYKMMDEMGRKGL----KLDTFTL 459
>Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0014:122626-120973 | 20130731
Length = 496
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/192 (19%), Positives = 87/192 (45%), Gaps = 7/192 (3%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
PT Y+ L ++N +++ N + H+++ I ++D+ +
Sbjct: 255 PTVVTYNTLMDGYCLDNEVNKAKNVFNVIGKRRMTPNVHSYTIIINGLCKIKMVDEALNF 314
Query: 97 LSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLM 156
++ + SL+ LCK R A ++++ M G+ A ++ +N L
Sbjct: 315 FKEMHCE-PNTVTYSSLIDALCKSGRISHAWELLDQMHDRGQPA------NIITYNSLLH 367
Query: 157 SYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPM 216
+ C + ++ A ++K+I+++G+ + T++ L+ G CK G ++ A + + ++ G +
Sbjct: 368 ALCKNHQVDKAIALVKKIKDQGIQPNINTYNILIDGLCKEGRLENAQVIFQDLLIKGYKV 427
Query: 217 LYSTHMCVITTL 228
T+ +I L
Sbjct: 428 KVWTYNTMINGL 439
>Medtr5g006640.1 | PPR containing plant-like protein | HC |
chr5:1017001-1018791 | 20130731
Length = 553
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+F L+ CK+ + A +V+E E + GF D+ +N F+ SYC D
Sbjct: 274 SFNILINGWCKVRNFEKARKVME----ERKEHGF--EPDVFTYNNFIESYCHDKDFRKVD 327
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
VL+ + G + T+ L+LG KAG + A+ RM +DG+
Sbjct: 328 EVLEEMRGNGCPPNAVTYTILLLGYGKAGQLSKALEEYERMKKDGI 373
>Medtr1g484840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:37765859-37769483 | 20130731
Length = 724
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 114/264 (43%), Gaps = 32/264 (12%)
Query: 36 HPTSAYYDELAVEAGTSGDL----NALRDILNKRFQ---DGCFNTKHTFSFITATNLTST 88
H TS Y E+ ++ G +G++ N + +++ RFQ + HTF + +
Sbjct: 91 HHTSNTYFEIILKLGLAGNVLEMENFVHNMVKNRFQGVEKALVSLIHTF--VEHCRIKEG 148
Query: 89 LIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERAD--DALQVVESMAVEGRMAGFGLRL 146
L+ V G P F +L+ + K E D +AL V + M G +
Sbjct: 149 LVVLVNMNSGGYKPPI---QVFNALLGAIVKEESGDFQNALLVYKEMVKAGVLP------ 199
Query: 147 DLTAHNM-FLMSYCFSGD-LEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIA 204
T + L+ F+ D ++ A +R+ N+G + + +TF+ LV G + G VD A+A
Sbjct: 200 --TVDTLNCLLEILFTIDRVDLALDQFRRMNNKGCSPNSKTFEILVKGLIENGQVDEAVA 257
Query: 205 VVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDT----QLLGCLG 260
V+ M++ S + C I R N ++ + R D + L+ CL
Sbjct: 258 VLEEMLKLECQPDLSFYTCTIPLFCRENKVEEGVRLFRMMKDSDLVPEALIYEALIQCLC 317
Query: 261 SKLMMLKKVKEAMLILDEMNQKGL 284
L K+ A+ +++EM + G+
Sbjct: 318 KNL----KLDSAVNLINEMIESGI 337
>Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:30578711-30577387 | 20130731
Length = 426
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ ++ RLCK + DA + M V+ D+ +N + +C G LE A
Sbjct: 104 YSMIINRLCKDKLVVDAYDLYCEMVVKRIFP------DVVTYNTLIYGFCIVGQLEDAIR 157
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ + + + + +F+ L+ G CK G V G +V+ M++ V T +I
Sbjct: 158 LFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYF 217
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ +AR + T+D + + + L K V EA+++ EM K +
Sbjct: 218 LVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSM 272
>Medtr6g079440.1 | RNA processing factor 2, putative | HC |
chr6:29951090-29949379 | 20130731
Length = 541
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ SL+ LCK R D ++ M G+ A ++ +N L + C + ++ A
Sbjct: 371 SYNSLIDGLCKSGRISDVWDLLVEMHDIGQPA------NVITYNSLLDALCKNHQVDKAI 424
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+LK+I+++G+ + T+ LV G CK G ++ A + ++ G P+ S + ++
Sbjct: 425 ALLKKIKDQGIQPNMYTYTILVDGLCKNGRLEDAQEIYHDLLTKGYPLNVSMYNVMVNEF 484
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ + +A T + L L K +A+ +L EM +GL
Sbjct: 485 CKEGLFDEALSLLSKMEDNGCTPNAITYQTLICALFENNKNDKAVKLLREMIVRGL 540
>Medtr2g072170.1 | PPR containing plant-like protein | HC |
chr2:30300092-30302292 | 20130731
Length = 540
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 36/178 (20%)
Query: 71 FNTKHTFSFITATNLTS----TLIDDVVRTLSGLNP-GFTRKSAFESLVTRLCKLERADD 125
+N F T T T ID +++TL P FT+ F + K +R D
Sbjct: 79 YNPTQPFCISLITKFTQSHNFTYIDTLLKTLP--KPYSFTQDFFFNLIKIYAHKAQRIDK 136
Query: 126 ALQVVESMAVEGRMAG-----------------------------FGLRLDLTAHNMFLM 156
A+Q++ M G G+ +D N+ +
Sbjct: 137 AIQLLNEMPNYGTWPSIKTFNFVLNVLVNSKLYDVVFDLYASALKLGVEIDACCLNIMIK 196
Query: 157 SYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
C G++E+A V GL + RTF ++ G C+ G+VD ++ RM E+G+
Sbjct: 197 GLCKKGEMESAFKVFDEFPKMGLKRNERTFATIMNGLCEKGMVDEGFGLLERMKEEGI 254
>Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:3641843-3643495 | 20130731
Length = 550
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ ++ L K++ D+AL + + M +G + D +N + C G + A
Sbjct: 341 SYNIMINGLGKIKMVDEALSLFKEMCCKG------IAPDTVTYNSLIDGLCKLGRISYAW 394
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV-PMLYSTHMCV 224
++ + N G+ AD T+++L+ CK +D AIA+V+++ + G+ P +Y+ ++ +
Sbjct: 395 QLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILI 451
>Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0654:2086-773 | 20130731
Length = 412
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEG----RMAGFGLRLDLTAHNMF 154
GL P +++ ++ CK++ D+AL + M G +M G ++ +N F
Sbjct: 225 GLTP---NANSYNIIINGFCKIKMVDEALNLFNEMCCRGIAPDKMHDRGQHANVITYNSF 281
Query: 155 LMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
L + C + ++ A +K+I++ G+ T++ L+ G CK ++ A + + ++ G
Sbjct: 282 LHALCKNHQVDKAIAFVKKIKDHGIQPYINTYNILIDGLCKEVRLENAQVIFQDLLIKGY 341
Query: 215 PMLYSTHMCVITTLLRMNCYKQA 237
+ T+ +I L + QA
Sbjct: 342 KVTVWTYNIMINGLCLEGLFDQA 364
>Medtr3g088810.1 | PPR containing plant-like protein | LC |
chr3:40631638-40633732 | 20130731
Length = 577
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 23/191 (12%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGF-GLRL---------------DLTAHNM 153
F+ L+ LCK R D+AL V + + G + + G RL ++ +N
Sbjct: 185 FDILIDHLCKARRTDEALGVFDKL--RGTLQSWEGRRLLSLLEEMKVEKKNWPNIVTYNC 242
Query: 154 FLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ C +G+++ + R+ E + D T +ALV G CK G VD A+ M G
Sbjct: 243 LIDWLCKAGNVDKTHELFSRMNEEQVEPDVVTLNALVNGMCKIGRVDSAVEFFNEMKGKG 302
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
+ T+ +I+ +N +A +Y + DT + L S L + +++
Sbjct: 303 LEGNAVTYTALISGFCGVNNIVKAVQYFDEMLSSGCSPDTIVYYSLISSLTIARRMD--- 359
Query: 274 LILDEMNQKGL 284
L ++ Q GL
Sbjct: 360 --LSQLKQVGL 368
>Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:31000531-30999809 | 20130731
Length = 240
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ LCK + +DA + M V R+ LD+ +N + + L A G
Sbjct: 2 YTTIIDSLCKYKLVNDAFDLYSEM-VAKRIG-----LDVFTYNALISGFSAVSKLNDAIG 55
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ E + D TF+ LV G CK G V A V+ M++D + T+ ++
Sbjct: 56 LFNKMTAENINPDVYTFNILVDGFCKDGRVKEAKNVLAMMIKDDIKPRVVTYSSLMDGYC 115
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEM 279
+N +A++ S + + Q + + +K V EA+ + +EM
Sbjct: 116 LINEVNKAKEIFDSMAARGVMANVQSYTTMINGFCKIKMVDEAINLFEEM 165
>Medtr3g053350.1 | PPR containing plant-like protein | HC |
chr3:21211857-21206311 | 20130731
Length = 852
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%)
Query: 130 VESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDAL 189
VE M V + G D+ N L + + AGV K ++ G + TF+ L
Sbjct: 469 VEMMKVFEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTL 528
Query: 190 VLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARK 239
+ + G D A+AV + M+E GV ST+ V+ L R ++Q+ K
Sbjct: 529 ISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEK 578
>Medtr3g053350.2 | PPR containing plant-like protein | HC |
chr3:21211870-21205924 | 20130731
Length = 852
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%)
Query: 130 VESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDAL 189
VE M V + G D+ N L + + AGV K ++ G + TF+ L
Sbjct: 469 VEMMKVFEEIKECGCSPDIVTWNTLLAVFGHNQMDSEVAGVFKEMKRSGFVPERDTFNTL 528
Query: 190 VLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARK 239
+ + G D A+AV + M+E GV ST+ V+ L R ++Q+ K
Sbjct: 529 ISAYSRCGSFDQAMAVYKSMLESGVSPDLSTYNAVLAALARGGFWEQSEK 578
>Medtr8g105170.1 | PPR containing plant-like protein | LC |
chr8:44353122-44347538 | 20130731
Length = 1106
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
F L+ C +D +++E M +G M + T N + YC ++ A
Sbjct: 559 TFNVLMNGFCMSGMLEDGERLIEWMLEKGIMP------NATTFNSLMKQYCIKNNMRATT 612
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+ K + + G+ D T++ L+ G CKA + A + + MVE G + +T+ +I
Sbjct: 613 EIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGF 672
Query: 229 LRMNCYKQARK 239
+ + +ARK
Sbjct: 673 YKRKKFVEARK 683
>Medtr8g005870.1 | PPR containing plant-like protein | HC |
chr8:373503-372032 | 20130731
Length = 467
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 12/254 (4%)
Query: 37 PTSAYYDELAVEAGTSGD-----LNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLID 91
P + Y L S D L+ + LN DG K T + T+ +D
Sbjct: 121 PDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTADRVD 180
Query: 92 DVVRTLSGLNPGFTRKS--AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLT 149
D V + L+ ++ LV LCK L +V + E R F ++ +L
Sbjct: 181 DAVELIKELSSKHCSPDIYSYNFLVKNLCK----SRTLSLVYAFIDEMR-TKFDVKPNLV 235
Query: 150 AHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRM 209
+ + + + C + +L A ++ +E EG D ++ ++ G C AI V RM
Sbjct: 236 TYTILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRM 295
Query: 210 VEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKV 269
E GV T+ +I L + +A+K R K D L + + +
Sbjct: 296 KEKGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGET 355
Query: 270 KEAMLILDEMNQKG 283
A+ +L+EM KG
Sbjct: 356 LAALALLEEMEMKG 369
>Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:10128811-10130651 | 20130731
Length = 552
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 92/241 (38%), Gaps = 37/241 (15%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLID---DV 93
P Y+ L +N ILN Q G ++S + ++D D+
Sbjct: 308 PNVVTYNSLIDGYCLVKQVNKAEVILNTMAQRGVIADVQSYSIMINGFCKIKMVDEAIDL 367
Query: 94 VRTLSG--LNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGF--------- 142
+ + G L P + SL+ LCK R DA ++V M+ G+
Sbjct: 368 FKEMQGRQLVPD---TITYSSLIDGLCKSGRISDAWELVSEMSDRGQQPNIITYNSLLNA 424
Query: 143 --------------------GLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAAD 182
G++ L + + + C SG L+ A V + + +G D
Sbjct: 425 LCQNHHVDKAIALLRKFKTQGIQPTLCTYTILIKGLCMSGRLKDAQVVFQDLLIKGYNLD 484
Query: 183 PRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYAR 242
T+ A++ G C G+ D A+A++ +M ++G T+ +I +L + + A K R
Sbjct: 485 VYTYTAMIRGFCYEGLFDEALALLSKMKDNGCMPNAKTYEIIILSLFKKDENDMAEKLLR 544
Query: 243 S 243
Sbjct: 545 E 545
>Medtr4g075270.1 | PPR containing plant-like protein | HC |
chr4:28741133-28744928 | 20130731
Length = 889
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ L+ CK L V ES GRM G+R + +N + +C GDL AA
Sbjct: 396 YSILIDSFCK----RGMLDVAESYF--GRMIEDGIRETIYPYNSLINGHCKFGDLSAAEF 449
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV-PMLYS 219
+ ++ NEGL TF L+ G CK V+ A + R M E + P +Y+
Sbjct: 450 LYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYT 500
>Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:18204785-18193518 | 20130731
Length = 952
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+E+L+ CK R AL V + M+ + + + +N+ + + GD+ AA
Sbjct: 691 YEALLKACCKSGRMQSALAVTKEMSSKK------IPRNTFVYNILIDGWARRGDVWEAAD 744
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+++++ EG+ D T+ + + CKAG + A V++ M G+ T+ +I
Sbjct: 745 LMQQMRKEGVQPDIHTYTSFINACCKAGDMQNATQVIKEMEARGIKPNLKTYTTLIHGWA 804
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAML 274
R ++A K D + CL + L+ + ++ +
Sbjct: 805 RAAFPEKALKCFEDLKVAGLKPDRAVYHCLMTSLLSRATIAQSYI 849
>Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222711-45219784 | 20130731
Length = 695
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F L+ LCK R ++E+ V M+ G + D+ +N + YC ++ A
Sbjct: 268 FNILIDALCKEGR------ILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ R+ GL D ++ L+ G CK +VD A+ + + + + +++ +I L
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLC 381
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+K G D L L ++ EA+ +L M +KG+
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV 436
>Medtr3g078580.1 | PPR containing plant-like protein | HC |
chr3:35401646-35399196 | 20130731
Length = 490
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 75 HTFSFITATNLTSTLIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMA 134
H F + + D +V+ GL P + + +L+ LCK + +AL V + M
Sbjct: 282 HGFGVAGEVKRSKRVFDAMVK--EGLVPSV---ATYNALIQVLCKKDSVQNALLVFDEMV 336
Query: 135 VEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGAC 194
G G +LT +N+ + C SG++E +KR+E G +T++ ++ C
Sbjct: 337 ------GKGCVPNLTTYNVVIRGLCHSGEIERGVEFMKRMEENGCMPSVQTYNVVIRYYC 390
Query: 195 KAGVVDGAIAVVRRM 209
G ++ + + +M
Sbjct: 391 DEGELEKGLELFEKM 405
>Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:15728469-15726667 | 20130731
Length = 537
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 99 GLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSY 158
G+ P K + SL+ LCK R A + V+ M G A ++ +N + +
Sbjct: 360 GITPD---KVTYNSLIDGLCKARRIPCAWEFVDEMHANGIPA------NIFTYNSLIDAL 410
Query: 159 CFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLY 218
C + ++ A ++K+I+++G+ +D T+ L+ G CK G + A + + ++ G Y
Sbjct: 411 CKNHHVDKAIVLVKKIKDQGIQSDMYTYSILIDGLCKQGRLKDAQVIFQDLLIKG----Y 466
Query: 219 STHMCVITTLLRMNCYK 235
+ ++C + ++ C K
Sbjct: 467 NLNVCTYSIMINGLCSK 483
>Medtr1g016213.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:4260886-4260053 | 20130731
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 138 RMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAG 197
M G+ ++ + + +C G LE A G+ K++ +E + + TF+ LV CK G
Sbjct: 16 EMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYTFNGLVDAFCKEG 75
Query: 198 VVDGAIAVVRRMVEDGVP---MLYSTHM---CVITTLLRMNCYKQARKYARSFGGKDTTL 251
++ A V+ M+E + + YS+ M C++ + + A+ ++ ++ +
Sbjct: 76 KIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFK------AQSIFKTMAERELSY 129
Query: 252 DTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
D + + ++ +K V EA+ + +EM K +
Sbjct: 130 DVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQI 162
>Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC |
chr8:45222606-45220446 | 20130731
Length = 704
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
F L+ LCK R ++E+ V M+ G + D+ +N + YC ++ A
Sbjct: 268 FNILIDALCKEGR------ILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ R+ GL D ++ L+ G CK +VD A+ + + + + +++ +I L
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLC 381
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+K G D L L ++ EA+ +L M +KG+
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGV 436
>Medtr7g091470.1 | PPR containing plant-like protein | HC |
chr7:36185398-36179004 | 20130731
Length = 911
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Query: 97 LSGLNPGFTRKS-AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFL 155
L L+ GF + A+ SL+ C L R AL+V + M + G + D N+ +
Sbjct: 626 LEMLSIGFVPNNFAYNSLIGGFCNLGRMAQALKVEKEMRLRGLLP------DTFTFNIII 679
Query: 156 MSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVP 215
+C G++++A + GL D TF+ LV G CKA + A +V +M G
Sbjct: 680 DRFCRQGNMKSAIDAFLDMHRIGLMPDIFTFNILVGGYCKAFDMVRADDIVNKMYPYG-- 737
Query: 216 MLYSTHMCVITTLLRMNCYKQARKYARSFGGKD 248
LY + T +RM+ Y RK R+ D
Sbjct: 738 -LYPD---ITTYNIRMHGYCSVRKMNRAIAILD 766
>Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:24265034-24262613 | 20130731
Length = 557
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ +CK + +DA + M V R++ ++ ++ + +C G L+ A G
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEM-VSRRISS-----NIVTYSALISGFCIVGKLKDAIG 266
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ +E + D TF+ LV CK G V A + M++ G+ T+ ++
Sbjct: 267 LFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC 326
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+N A+ + + T + + + +K V +AM + EM+ K +
Sbjct: 327 LVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQI 381
>Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28827992-28825334 | 20130731
Length = 539
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ LCK D+A + M VE G+ LD+ ++N + +C G +AA
Sbjct: 213 YNTVIDGLCKQGLVDEACGLCTEM-VEN-----GIELDVYSYNSMIHGFCSVGRFQAAVK 266
Query: 170 VLKRIENEG-LAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+L + G + D TF+ L+ G CK G V A VV M++ G + + L
Sbjct: 267 LLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG----WKPDIVSYNAL 322
Query: 229 LRMNCYKQARKYARSFGGK---DTTLDTQLLGC-LGSKLMMLKKVKEAMLILDEMNQKGL 284
+ C + A+ K T L + C L + ++ V EAM++L EM+ K L
Sbjct: 323 MNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNL 382
>Medtr2g049740.1 | PPR containing plant-like protein | HC |
chr2:22338668-22342717 | 20130731
Length = 859
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 136 EGRMA--------GFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFD 187
EGR+A G G+ D+ ++ + ++C G ++ A VL+++ EGL + T++
Sbjct: 206 EGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYN 265
Query: 188 ALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYK----QARKYARS 243
LV G G +G V+R M E GV S ++ T L+R C K +A K R
Sbjct: 266 GLVNGYVGRGDFEGVERVLRLMSERGV----SRNVVTCTMLMRGYCKKGKMDEAEKLLRE 321
Query: 244 FGGKD-TTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ +D ++ G L + ++++A+ I DEM + GL
Sbjct: 322 VEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGL 363
>Medtr1g055295.1 | PPR containing plant-like protein | HC |
chr1:24439721-24443062 | 20130731
Length = 1046
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 1/130 (0%)
Query: 155 LMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
L S+C SG ++ A +++ ++ + +P F+ LV G CKAG + A+ +V M +
Sbjct: 349 LKSFCISGRIKEALELIRDLKYKDAVLEPEYFETLVRGLCKAGRISDALEIVEIMKRRDI 408
Query: 215 PMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAML 274
++++ +I LR N + A +S L L L + +EA +
Sbjct: 409 -VVWNVQGIIINGYLRRNDFCMALDVFQSMKESGYVPTVSSYTELIQHLFKLSRYEEACM 467
Query: 275 ILDEMNQKGL 284
+ DEM KG+
Sbjct: 468 MYDEMLGKGI 477
>Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:16704461-16701708 | 20130731
Length = 567
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 5/190 (2%)
Query: 96 TLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGR--MAGFGLRLDLTAHNM 153
L +NP F LV LCK + +A V+ M E + + ++N
Sbjct: 344 VLKNINPNVY---TFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMHCKPNTVSYNT 400
Query: 154 FLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDG 213
+ +C SG L A +L ++ + G + T+++L+ CK VD AIA+V + G
Sbjct: 401 LIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKAIALVNNFKDQG 460
Query: 214 VPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAM 273
+ T+ ++ L + K A+ + K L T + + L + + EA
Sbjct: 461 IQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMINGLCLEGLLDEAE 520
Query: 274 LILDEMNQKG 283
+L +M G
Sbjct: 521 TLLSKMEDNG 530
>Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:26701564-26699663 | 20130731
Length = 633
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 11/196 (5%)
Query: 89 LIDDVVRTLSGLNPGFTRKSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDL 148
L+D+++R GL+ F L+ LCK +VE+ + M G ++
Sbjct: 247 LVDEMIR--RGLD---VSVYVFTVLIDGLCK------NGMLVEAREMFDEMVNRGYEPNI 295
Query: 149 TAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRR 208
+ YC G+++ A + I G D T++ + G CK G V A+ V
Sbjct: 296 VTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDE 355
Query: 209 MVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKK 268
M +GV T+ +I L + A + ++ T D L L K+
Sbjct: 356 MCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKR 415
Query: 269 VKEAMLILDEMNQKGL 284
+ +A+L+ +++ + GL
Sbjct: 416 LDQAILLFNQLVESGL 431
>Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:35577637-35579719 | 20130731
Length = 590
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 38/191 (19%)
Query: 57 ALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRTLS-----GLNPGFTRKSAFE 111
ALR ++++ +D C T T++ + +T ID+ ++ L GL P + +
Sbjct: 200 ALR-VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPD---RYTYN 255
Query: 112 SLVTRLCKLERADDALQVVESMAVEGRMAG------------------FGLRL------- 146
+V +CK D A + + ++ G +AG +G +L
Sbjct: 256 VVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVK 315
Query: 147 ----DLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGA 202
+ ++ + + C G ++ A VLK ++ + LA D ++D L+ C+ G VD A
Sbjct: 316 GCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLA 375
Query: 203 IAVVRRMVEDG 213
I + M+ G
Sbjct: 376 IEFLDDMISGG 386
>Medtr2g016740.1 | PPR containing plant-like protein | HC |
chr2:5175787-5177502 | 20130731
Length = 489
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 71/180 (39%), Gaps = 6/180 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ L+ LCK + + E++ M G R D+ + + + ++
Sbjct: 257 SYTILIQDLCK------QMMMREAVEYFNEMVDRGCRSDVALYTCLITGFGRQKKMDVVY 310
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+LK + G D RT++AL+ + D A+ V ++M++ GV T+ ++ +
Sbjct: 311 DLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRVYKKMIQSGVEPTIHTYTMIMKSY 370
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGLPMGQ 288
Y+ R K D L+ + EA +DEM QKG+ Q
Sbjct: 371 FVTKNYEMGRSVWDEMRHKGCCPDDNSYTVFIGGLIRQGRPDEACKYIDEMMQKGMKAPQ 430
>Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |
scaffold0572:2027-3679 | 20130731
Length = 538
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 6/175 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ ++ CK++ D AL + M R+A D +N + C SG + A
Sbjct: 333 SYSIVINGFCKIKMVDKALSLFYEMRCR-RIAP-----DTVTYNSLIDGLCKSGRISYAW 386
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
++ + + G AD T+++L+ CK VD AIA+V+++ + G+ + T+ +I L
Sbjct: 387 ELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNILIDGL 446
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
+ K A+ + K L + + L + + EA +L +M G
Sbjct: 447 CKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNG 501
>Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30150151 | 20130731
Length = 527
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCKL R D ++ M G+ D+ +N C + ++ A
Sbjct: 357 TYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPT------DIITYNSLFDGLCKNHQVDRAI 410
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+LK+I+++G+ ++ L +G CK G ++ A V R + G + + +I L
Sbjct: 411 ALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGL 470
Query: 229 LRMNCYKQA 237
+ + +A
Sbjct: 471 CKEGFFDEA 479
>Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:30148306-30152005 | 20130731
Length = 527
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCKL R D ++ M G+ D+ +N C + ++ A
Sbjct: 357 TYNSLIDGLCKLGRVSDVWDFIDEMHDRGQPT------DIITYNSLFDGLCKNHQVDRAI 410
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+LK+I+++G+ ++ L +G CK G ++ A V R + G + + +I L
Sbjct: 411 ALLKKIKDQGIQPSMYSYTILFVGLCKNGRLEDAQEVYRDLTIKGYHLDAKMYTVMINGL 470
Query: 229 LRMNCYKQA 237
+ + +A
Sbjct: 471 CKEGFFDEA 479
>Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:24729620-24732624 | 20130731
Length = 557
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 80/180 (44%), Gaps = 8/180 (4%)
Query: 37 PTSAYYDELAVEAGTSGDLNALRDILNKRFQDGCFNTKHTFSFITATNLTSTLIDDVVRT 96
P Y+ L G G ++ + ++++ G T++ I + +D +
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL 442
Query: 97 LSGLNPGFTRKS--AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMF 154
L+ L R + L+ LC+ + +DA +V E + V+G LD+ + +
Sbjct: 443 LTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGY------NLDVYTYTVM 496
Query: 155 LMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGV 214
+ +C G +AA +L ++E+ G + +T++ ++L + D A ++R M+ G+
Sbjct: 497 IQGFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556
>Medtr5g094770.1 | PPR containing plant-like protein | HC |
chr5:41420061-41421993 | 20130731
Length = 577
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ ++++ L + D+AL + M+ +G + DL ++N + C G+L A
Sbjct: 378 SYSTMISGLYLHGKTDEALSLFHEMSRKG------IARDLISYNSLIKGLCQEGELAKAT 431
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+L ++ +GL +F L+ CK G +GA+ +++ M + + + STH +I L
Sbjct: 432 NLLNKLLIQGLEPSVSSFTPLIKCLCKVGDTEGAMRLLKDMHDRHLEPIASTHDYMIIGL 491
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
+ + Q ++ + Q L L ++ + +++LD M ++G
Sbjct: 492 SKKGDFAQGMEWLLKMLSWKLKPNMQTFEHLIDCLKRENRLDDILIVLDLMFREG 546
>Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:15716302-15714545 | 20130731
Length = 456
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCK R A ++++ M + R G +++ +N L + C + ++ A
Sbjct: 313 TYSSLIDGLCKSGRVSHAWELLDKMH-DDR----GQPVNIITYNSLLHALCKNHHVDKAI 367
Query: 169 GVLKRIENEGLAADPRTFDALVLGACK-------AGVVDGAIAVVRRMVEDGVPMLYSTH 221
++K+I+++G+ + T++ L+ G CK G+ D A+ ++ +M ++G T+
Sbjct: 368 ALVKKIKDQGIEPNMTTYNILIDGLCKEGRLRNAQGLFDEAVTLLSKMEDNGCIPDAVTY 427
Query: 222 MCVITTLLRMNCYKQARKYARS 243
+I L + + +A K R
Sbjct: 428 ETIIRALFKNDENDKAEKLLRE 449
>Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC |
chr6:29358896-29355839 | 20130731
Length = 517
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ S++ LCK + D+A+ A+ +M G++ ++ + + + C SG LE A
Sbjct: 319 TYSSILDALCKNHQVDNAI------ALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDAR 372
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
V + + +G + T+ ++ G C G+ D A+ ++ +M ++G T+ +I +L
Sbjct: 373 KVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSL 432
Query: 229 LRMNCYKQARK 239
+ + + A K
Sbjct: 433 FKKDENEMAEK 443
>Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0110:45179-40986 | 20130731
Length = 542
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ SL+ LCKL R DA ++ M G+ A ++ ++ L C + ++ A
Sbjct: 372 TYNSLIDGLCKLGRMSDAWDFIDEMHDRGQPA------NIITYSSLLDGLCKNHQVDKAI 425
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVED 212
+L +I+N+G+ D T+ LV G CK G + A V + ++ +
Sbjct: 426 TLLTKIKNQGIQLDIYTYTILVDGLCKNGKLRDAQEVYQVLLNN 469
>Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:29893284-29894996 | 20130731
Length = 570
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 74/175 (42%), Gaps = 6/175 (3%)
Query: 110 FESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAG 169
+ +++ +CK + +DA + M +G + ++ ++ + + G L+ A
Sbjct: 227 YSTIIDGMCKDKHVNDAFDLYSEMVSKG------ISPNVVTYSALISGFFTVGQLKDAID 280
Query: 170 VLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTLL 229
+ ++ E + D TF+ LV G CK G + V M++ G+ T+ ++
Sbjct: 281 LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 340
Query: 230 RMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
+ +A+ + + D Q L +KKV EAM + EM+ K +
Sbjct: 341 LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHI 395
>Medtr8g098755.1 | PPR containing plant-like protein | HC |
chr8:41238399-41236005 | 20130731
Length = 671
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 7/177 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
+ L++ L R DA VV + + AGFGL D +N+ + +C LE
Sbjct: 422 VYYCLISGLTIAGRMGDASVVVSQL----KRAGFGL--DRHCYNVLISGFCKKKKLERVY 475
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+L +E G+ D T++ LV KAG A V+++M+++G+ T+ VI
Sbjct: 476 EMLNEMEENGVKPDIVTYNTLVSYLGKAGDFATATKVMKKMIKEGLKPSVVTYGAVIHAY 535
Query: 229 -LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
L+ N + + + +T + L L V+ A+ ++D+M KG+
Sbjct: 536 CLKKNIDEAMKIFGEMCSTSMVPPNTVIYNILIDALCKNNDVERAVSLMDDMKVKGV 592
>Medtr1g045880.1 | PPR containing plant-like protein | HC |
chr1:17272396-17266667 | 20130731
Length = 624
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 60/147 (40%)
Query: 138 RMAGFGLRLDLTAHNMFLMSYCFSGDLEAAAGVLKRIENEGLAADPRTFDALVLGACKAG 197
M G+ L+L N + YC G ++ A + +E +G+ AD T++ L G CK
Sbjct: 382 EMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLH 441
Query: 198 VVDGAIAVVRRMVEDGVPMLYSTHMCVITTLLRMNCYKQARKYARSFGGKDTTLDTQLLG 257
D A ++ MVE GV T I + +A + R K +
Sbjct: 442 RYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYN 501
Query: 258 CLGSKLMMLKKVKEAMLILDEMNQKGL 284
L +KVK+A I EM KGL
Sbjct: 502 TLIDAYCKKEKVKQAHKIKSEMINKGL 528
>Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:17250153-17251759 | 20130731
Length = 497
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/175 (21%), Positives = 81/175 (46%), Gaps = 6/175 (3%)
Query: 109 AFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEAAA 168
++ +++ L K++ D+A+ + E M E + D+ A++ + C SG + +A
Sbjct: 292 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIP------DVVAYSSLIDGLCKSGRINSAL 345
Query: 169 GVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVITTL 228
+ + + G + T+ +L+ CK+ VD AIA+++++ + G+ T+ ++ L
Sbjct: 346 KYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGL 405
Query: 229 LRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKG 283
+ A+K + K +D + + L EA+ +L +M KG
Sbjct: 406 CKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 460
>Medtr7g025610.1 | PPR containing plant-like protein, putative | HC
| chr7:8534854-8532764 | 20130731
Length = 646
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 9/178 (5%)
Query: 107 KSAFESLVTRLCKLERADDALQVVESMAVEGRMAGFGLRLDLTAHNMFLMSYCFSGDLEA 166
K F SL++ +C+ E+ D ++V+ R DL N L+SY +G
Sbjct: 316 KYTFTSLLSAICRSEQFDLLPKLVQHCKHISR--------DLVFCNALLISYVKAGYSSR 367
Query: 167 AAGVLKRIENEGLAADPRTFDALVLGACKAGVVDGAIAVVRRMVEDGVPMLYSTHMCVIT 226
A + +R+ +EG D TF L+ C D A+ V R + D ++ H +
Sbjct: 368 ALELYERMISEGFKPDKYTFAGLLSALCAENRNDEAVKVWRAVTMDHTDDVH-IHTVISN 426
Query: 227 TLLRMNCYKQARKYARSFGGKDTTLDTQLLGCLGSKLMMLKKVKEAMLILDEMNQKGL 284
L + Y+QA S K LD+ G + + EA + D+M + GL
Sbjct: 427 ELKKAGQYEQASDVFISEAVKKYPLDSIAYGVGIDAHLRSGRTLEARTLYDQMKKNGL 484